annotate scripts/score_parser.py @ 2057:416fc71e0374

Scripts: evaluation_stats.py added to quickly show a report on tests done so far (to be expanded)
author Brecht De Man <b.deman@qmul.ac.uk>
date Wed, 01 Jul 2015 11:09:17 +0100
parents a164db84aaef
children b7fd0296c6ab
rev   line source
b@1554 1 #!/usr/bin/python
b@1554 2
b@1598 3 import xml.etree.ElementTree as ET
b@1598 4 import os
b@1598 5 import csv
b@1598 6
b@1598 7 #TODO Remove DEBUG statements
b@1598 8
b@1553 9 # XML results files location (modify as needed):
b@1553 10 folder_name = "../saves" # Looks in 'saves/' folder from 'scripts/' folder
b@1553 11
b@1598 12 # get every XML file in folder
b@1555 13 for file in os.listdir(folder_name):
b@1598 14 if file.endswith(".xml"):
b@1553 15 tree = ET.parse(folder_name + '/' + file)
b@1598 16 root = tree.getroot()
b@1554 17 #print "DEBUG Reading " + file + "..."
b@1598 18
b@1598 19 # get subject ID from XML file
b@1554 20 subject_id = file[:-4] # file name (without extension) as subject ID
b@1598 21
b@1598 22 # get list of all pages this subject evaluated
b@1598 23 for audioholder in root.findall("./audioholder"): # iterate over pages
b@1598 24 page_name = audioholder.get('id') # get page name
b@1554 25
b@2036 26 if page_name is None: # ignore 'empty' audio_holders
b@2057 27 print "WARNING: " + file + " contains empty audio holder. (score_parser.py)"
b@2036 28 break
b@1598 29
b@1553 30 file_name = folder_name+'/ratings/'+page_name+'-ratings.csv' # score file name
b@1598 31
b@1598 32 # create folder 'ratings if not yet created
b@1553 33 if not os.path.exists(folder_name + '/ratings'):
b@1553 34 os.makedirs(folder_name + '/ratings')
b@1598 35
b@1598 36 # header: fragment IDs in 'alphabetical' order
b@1598 37 # go to fragment column, or create new column if it doesn't exist yet
b@1598 38
b@1598 39 # get array of audio elements and number of audio elements
b@1553 40 audiolist = audioholder.findall("./audioelement")
b@1598 41 n_fragments = len(audiolist)
b@1598 42
b@1598 43 # get alphabetical array of fragment IDs from this subject's XML
b@1598 44 fragmentnamelist = [] # make empty list
b@1598 45 for audioelement in audiolist: # iterate over all audioelements
b@1598 46 fragmentnamelist.append(audioelement.get('id')) # add to list
b@1598 47
b@1598 48
b@1598 49 # if file exists, get header and add 'new' fragments
b@1598 50 if os.path.isfile(file_name):
b@1554 51 #print "DEBUG file " + file_name + " already exists - reading header"
b@1598 52 with open(file_name, 'r') as readfile:
b@1598 53 filereader = csv.reader(readfile, delimiter=',')
b@1598 54 headerrow = filereader.next()
b@1598 55
b@1554 56 # Which of the fragmentes are in fragmentnamelist but not in headerrow?
b@1554 57 newfragments = list(set(fragmentnamelist)-set(headerrow))
b@1554 58 newfragments = sorted(newfragments) # new fragments in alphabetical order
b@1554 59 # If not empty, read file and rewrite adding extra columns
b@1554 60 if newfragments: # if not empty
b@1554 61 #print "DEBUG New fragments found: " + str(newfragments)
b@1554 62 with open('temp.csv', 'w') as writefile:
b@1554 63 filewriter = csv.writer(writefile, delimiter=',')
b@1554 64 filewriter.writerow(headerrow + newfragments) # write new header
b@1554 65 #print " "+str(headerrow + newfragments) # DEBUG
b@1554 66 with open(file_name, 'r') as readfile:
b@1554 67 filereader = csv.reader(readfile, delimiter=',')
b@1554 68 filereader.next() # skip header
b@1598 69 for row in filereader: # rewrite row plus empty cells for every new fragment name
b@1554 70 #print " Old row: " + str(row) # DEBUG
b@1598 71 filewriter.writerow(row + ['']*len(newfragments))
b@1554 72 #print " New row: " + str(row + ['']*len(newfragments)) # DEBUG
b@1554 73 os.rename('temp.csv', file_name) # replace old file with temp file
b@1554 74 headerrow = headerrow + newfragments
b@1554 75 #print "DEBUG New header row: " + str(headerrow)
b@1598 76
b@1598 77 # if not, create file and make header
b@1598 78 else:
b@1598 79 #print ["DEBUG file " + file_name + " doesn't exist yet - making new one"]
b@1598 80 headerrow = sorted(fragmentnamelist) # sort alphabetically
b@1598 81 headerrow.insert(0,'')
b@1598 82 fragmentnamelist = fragmentnamelist[1:] #HACKY FIX inserting in firstrow also affects fragmentnamelist
b@1598 83 with open(file_name, 'w') as writefile:
b@1598 84 filewriter = csv.writer(writefile, delimiter=',')
b@1598 85 filewriter.writerow(headerrow)
b@1598 86
b@1598 87 # open file to write for this page
b@1598 88 writefile = open(file_name, 'a')
b@1598 89 filewriter = csv.writer(writefile, delimiter=',')
b@1598 90
b@1598 91 # prepare row to be written for this subject for this page
b@1598 92 ratingrow = [subject_id]
b@1598 93
b@1598 94 # get scores related to fragment [id]
b@1598 95 for fragmentname in headerrow[1:]: # iterate over fragments in header (skip first empty column)
b@1553 96 elementvalue = audioholder.find("./audioelement/[@id='"
b@1598 97 + fragmentname
b@1598 98 + "']/value")
b@1598 99 if hasattr(elementvalue, 'text'): # if rating for this fragment exists
b@1598 100 ratingrow.append(elementvalue.text) # add to rating row
b@1598 101 else: # if this subject has not rated this fragment
b@1598 102 ratingrow.append('') # append empty cell
b@1598 103
b@1598 104 # write row: [subject ID, rating fragment ID 1, ..., rating fragment ID M]
b@1555 105 if any(ratingrow[1:]): # append to file if row non-empty (except subject name)
b@1555 106 filewriter.writerow(ratingrow)
nickjillings@1601 107