annotate scripts/score_parser.py @ 2036:237570166d1f

Comment and rating scripts: robust against audioholders without id or audioelements; fixes issue where plots were not cleared before adding new content; showing legend optional; robust against non-UTF8 characters in legend names
author Brecht De Man <b.deman@qmul.ac.uk>
date Mon, 15 Jun 2015 13:09:46 +0100
parents 7d3cbad47ae4
children ab79d76c6f85
rev   line source
b@1598 1 import xml.etree.ElementTree as ET
b@1598 2 import os
b@1598 3 import csv
b@1598 4
b@1598 5 #TODO Remove DEBUG statements
b@1598 6
b@1598 7 # get every XML file in folder
b@1598 8 for file in os.listdir("."): # You have to put this in folder where output XML files are.
b@1598 9 if file.endswith(".xml"):
b@1598 10 tree = ET.parse(file)
b@1598 11 root = tree.getroot()
b@1598 12 #print ["DEBUG Reading " + file + "..."]
b@1598 13
b@1598 14 # get subject ID from XML file
b@1598 15 subject_id = file # file name as subject ID
b@1598 16
b@1598 17 # get list of all pages this subject evaluated
b@1598 18 for audioholder in root.findall("./audioholder"): # iterate over pages
b@1598 19 page_name = audioholder.get('id') # get page name
b@1598 20 #print ["DEBUG page " + page_name]
b@2036 21
b@2036 22 if page_name is None: # ignore 'empty' audio_holders
b@2036 23 break
b@1598 24
b@1598 25 file_name = 'ratings/'+page_name+'-ratings.csv' # score file name
b@1598 26
b@1598 27 # create folder 'ratings if not yet created
b@1598 28 if not os.path.exists('ratings'):
b@1598 29 os.makedirs('ratings')
b@1598 30
b@1598 31 # header: fragment IDs in 'alphabetical' order
b@1598 32 # go to fragment column, or create new column if it doesn't exist yet
b@1598 33
b@1598 34 # get array of audio elements and number of audio elements
b@1598 35 audiolist = root.findall("*/[@id='"+page_name+"']/audioelement")
b@1598 36 n_fragments = len(audiolist)
b@1598 37
b@1598 38 # get alphabetical array of fragment IDs from this subject's XML
b@1598 39 fragmentnamelist = [] # make empty list
b@1598 40 for audioelement in audiolist: # iterate over all audioelements
b@1598 41 fragmentnamelist.append(audioelement.get('id')) # add to list
b@1598 42
b@1598 43
b@1598 44 # if file exists, get header and add 'new' fragments
b@1598 45 if os.path.isfile(file_name):
b@1598 46 #print ["DEBUG file " + file_name + " already exists - reading header"]
b@1598 47 with open(file_name, 'r') as readfile:
b@1598 48 filereader = csv.reader(readfile, delimiter=',')
b@1598 49 headerrow = filereader.next()
b@1598 50 #headerrow = headerrow[1:] # remove first column (empty)
b@1598 51
b@1598 52 # Which of the fragmentes are in fragmentnamelist but not in headerrow?
b@1598 53 newfragments = list(set(fragmentnamelist)-set(headerrow))
b@1598 54 newfragments = sorted(newfragments) # new fragments in alphabetical order
b@1598 55 # If not empty, read file and rewrite adding extra columns
b@1598 56 if newfragments: # if not empty
b@1598 57 print ["DEBUG New fragments found: " + str(newfragments)]
b@1598 58 with open('temp.csv', 'w') as writefile:
b@1598 59 filewriter = csv.writer(writefile, delimiter=',')
b@1598 60 filewriter.writerow(headerrow + newfragments) # write new header
b@1598 61 for row in filereader: # rewrite row plus empty cells for every new fragment name
b@1598 62 #print ["DEBUG Old row: " + str(row)]
b@1598 63 filewriter.writerow(row + ['']*len(newfragments))
b@1598 64 #print ["DEBUG New row: " + str(row + ['']*len(newfragments))]
b@1598 65 os.rename('temp.csv', file_name) # replace old file with temp file
b@1598 66 headerrow = headerrow + newfragments
b@1598 67 print ["DEBUG New header row: " + str(headerrow)]
b@1598 68
b@1598 69 # if not, create file and make header
b@1598 70 else:
b@1598 71 #print ["DEBUG file " + file_name + " doesn't exist yet - making new one"]
b@1598 72 headerrow = sorted(fragmentnamelist) # sort alphabetically
b@1598 73 headerrow.insert(0,'')
b@1598 74 fragmentnamelist = fragmentnamelist[1:] #HACKY FIX inserting in firstrow also affects fragmentnamelist
b@1598 75 with open(file_name, 'w') as writefile:
b@1598 76 filewriter = csv.writer(writefile, delimiter=',')
b@1598 77 filewriter.writerow(headerrow)
b@1598 78
b@1598 79 # open file to write for this page
b@1598 80 writefile = open(file_name, 'a')
b@1598 81 filewriter = csv.writer(writefile, delimiter=',')
b@1598 82
b@1598 83 # prepare row to be written for this subject for this page
b@1598 84 ratingrow = [subject_id]
b@1598 85
b@1598 86 # get scores related to fragment [id]
b@1598 87 for fragmentname in headerrow[1:]: # iterate over fragments in header (skip first empty column)
b@1598 88 elementvalue = root.find("*/[@id='"
b@1598 89 + page_name
b@1598 90 + "']/audioelement/[@id='"
b@1598 91 + fragmentname
b@1598 92 + "']/value")
b@1598 93 if hasattr(elementvalue, 'text'): # if rating for this fragment exists
b@1598 94 ratingrow.append(elementvalue.text) # add to rating row
b@1598 95 else: # if this subject has not rated this fragment
b@1598 96 ratingrow.append('') # append empty cell
b@1598 97
b@1598 98 # write row: [subject ID, rating fragment ID 1, ..., rating fragment ID M]
nickjillings@1601 99 filewriter.writerow(ratingrow)
nickjillings@1601 100