annotate scripts/score_parser.py @ 2085:11328fe5d16d

Add DMRN Proposal
author Dave Moffat <me@davemoffat.com>
date Mon, 07 Dec 2015 11:21:01 +0000
parents 56bdd4d357f9
children f9c9a40f33bd
rev   line source
b@1554 1 #!/usr/bin/python
b@1554 2
b@1598 3 import xml.etree.ElementTree as ET
b@1598 4 import os
b@2069 5 import sys
b@1598 6 import csv
b@1598 7
b@2069 8 # COMMAND LINE ARGUMENTS
b@2069 9
b@2069 10 assert len(sys.argv)<3, "score_parser takes at most 1 command line argument\n"+\
b@2069 11 "Use: python score_parser.py [rating_folder_location]"
b@2069 12
b@2069 13 # XML results files location
b@2069 14 if len(sys.argv) == 1:
b@2069 15 folder_name = "../saves" # Looks in 'saves/' folder from 'scripts/' folder
b@2069 16 print "Use: python score_parser.py [rating_folder_location]"
b@2069 17 print "Using default path: " + folder_name
b@2069 18 elif len(sys.argv) == 2:
b@2069 19 folder_name = sys.argv[1] # First command line argument is folder
b@1553 20
b@2072 21 # check if folder_name exists
b@2072 22 if not os.path.exists(folder_name):
b@2072 23 #the file is not there
b@2072 24 print "Folder '"+folder_name+"' does not exist."
b@2072 25 sys.exit() # terminate script execution
b@2072 26 elif not os.access(os.path.dirname(folder_name), os.W_OK):
b@2072 27 #the file does exist but write privileges are not given
b@2072 28 print "No write privileges in folder '"+folder_name+"'."
b@2072 29
b@2072 30
b@2072 31 # CODE
b@2072 32
b@2078 33 # remember which files have been opened this time
b@2078 34 file_history = []
b@2078 35
b@1598 36 # get every XML file in folder
b@1555 37 for file in os.listdir(folder_name):
b@1598 38 if file.endswith(".xml"):
b@1553 39 tree = ET.parse(folder_name + '/' + file)
b@1598 40 root = tree.getroot()
b@1598 41
b@1598 42 # get subject ID from XML file
b@1554 43 subject_id = file[:-4] # file name (without extension) as subject ID
b@1598 44
b@1598 45 # get list of all pages this subject evaluated
b@1598 46 for audioholder in root.findall("./audioholder"): # iterate over pages
b@1598 47 page_name = audioholder.get('id') # get page name
b@1554 48
b@2036 49 if page_name is None: # ignore 'empty' audio_holders
b@2057 50 print "WARNING: " + file + " contains empty audio holder. (score_parser.py)"
b@2036 51 break
b@1598 52
b@1553 53 file_name = folder_name+'/ratings/'+page_name+'-ratings.csv' # score file name
b@1598 54
b@2078 55 # create folder 'ratings' if not yet created
b@1553 56 if not os.path.exists(folder_name + '/ratings'):
b@1553 57 os.makedirs(folder_name + '/ratings')
b@1598 58
b@1598 59 # header: fragment IDs in 'alphabetical' order
b@1598 60 # go to fragment column, or create new column if it doesn't exist yet
b@1598 61
b@1598 62 # get array of audio elements and number of audio elements
b@1553 63 audiolist = audioholder.findall("./audioelement")
b@1598 64 n_fragments = len(audiolist)
b@1598 65
b@1598 66 # get alphabetical array of fragment IDs from this subject's XML
b@1598 67 fragmentnamelist = [] # make empty list
b@1598 68 for audioelement in audiolist: # iterate over all audioelements
b@1598 69 fragmentnamelist.append(audioelement.get('id')) # add to list
b@1598 70
b@1598 71 # if file exists, get header and add 'new' fragments
b@1598 72 if os.path.isfile(file_name):
b@1598 73 with open(file_name, 'r') as readfile:
b@1598 74 filereader = csv.reader(readfile, delimiter=',')
b@1598 75 headerrow = filereader.next()
b@1598 76
b@2078 77 # If file hasn't been opened yet this time, remove all rows except header
b@2078 78 if file_name not in file_history:
b@2078 79 with open(file_name, 'w') as writefile:
b@2078 80 filewriter = csv.writer(writefile, delimiter=',')
b@2078 81 headerrow = sorted(headerrow)
b@2078 82 filewriter.writerow(headerrow)
b@2078 83 file_history.append(file_name)
b@2078 84
b@1554 85 # Which of the fragmentes are in fragmentnamelist but not in headerrow?
b@1554 86 newfragments = list(set(fragmentnamelist)-set(headerrow))
b@1554 87 newfragments = sorted(newfragments) # new fragments in alphabetical order
b@1554 88 # If not empty, read file and rewrite adding extra columns
b@1554 89 if newfragments: # if not empty
b@1554 90 with open('temp.csv', 'w') as writefile:
b@1554 91 filewriter = csv.writer(writefile, delimiter=',')
b@1554 92 filewriter.writerow(headerrow + newfragments) # write new header
b@1554 93 with open(file_name, 'r') as readfile:
b@1554 94 filereader = csv.reader(readfile, delimiter=',')
b@1554 95 filereader.next() # skip header
b@1598 96 for row in filereader: # rewrite row plus empty cells for every new fragment name
b@1598 97 filewriter.writerow(row + ['']*len(newfragments))
b@1554 98 os.rename('temp.csv', file_name) # replace old file with temp file
b@1554 99 headerrow = headerrow + newfragments
b@1598 100
b@1598 101 # if not, create file and make header
b@1598 102 else:
b@1598 103 headerrow = sorted(fragmentnamelist) # sort alphabetically
b@1598 104 headerrow.insert(0,'')
b@1598 105 fragmentnamelist = fragmentnamelist[1:] #HACKY FIX inserting in firstrow also affects fragmentnamelist
b@1598 106 with open(file_name, 'w') as writefile:
b@1598 107 filewriter = csv.writer(writefile, delimiter=',')
b@1598 108 filewriter.writerow(headerrow)
b@1598 109
b@1598 110 # open file to write for this page
b@1598 111 writefile = open(file_name, 'a')
b@1598 112 filewriter = csv.writer(writefile, delimiter=',')
b@1598 113
b@1598 114 # prepare row to be written for this subject for this page
b@1598 115 ratingrow = [subject_id]
b@1598 116
b@1598 117 # get scores related to fragment [id]
b@1598 118 for fragmentname in headerrow[1:]: # iterate over fragments in header (skip first empty column)
b@1553 119 elementvalue = audioholder.find("./audioelement/[@id='"
b@1598 120 + fragmentname
b@1598 121 + "']/value")
b@1598 122 if hasattr(elementvalue, 'text'): # if rating for this fragment exists
b@1598 123 ratingrow.append(elementvalue.text) # add to rating row
b@1598 124 else: # if this subject has not rated this fragment
b@1598 125 ratingrow.append('') # append empty cell
b@1598 126
b@1598 127 # write row: [subject ID, rating fragment ID 1, ..., rating fragment ID M]
b@1555 128 if any(ratingrow[1:]): # append to file if row non-empty (except subject name)
b@1555 129 filewriter.writerow(ratingrow)