mas01cr@509
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1 extern "C" {
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mas01cr@509
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2 #include "audioDB_API.h"
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mas01cr@509
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3 }
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mas01cr@498
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4 #include "audioDB-internals.h"
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mas01cr@498
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5 #include "accumulators.h"
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mas01cr@239
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6
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mas01cr@498
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7 bool audiodb_powers_acceptable(const adb_query_refine_t *r, double p1, double p2) {
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mas01cr@498
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8 if (r->flags & ADB_REFINE_ABSOLUTE_THRESHOLD) {
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mas01cr@498
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9 if ((p1 < r->absolute_threshold) || (p2 < r->absolute_threshold)) {
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mas01cr@239
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10 return false;
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mas01cr@239
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11 }
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mas01cr@239
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12 }
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mas01cr@498
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13 if (r->flags & ADB_REFINE_RELATIVE_THRESHOLD) {
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mas01cr@498
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14 if (fabs(p1-p2) > fabs(r->relative_threshold)) {
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mas01cr@239
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15 return false;
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mas01cr@239
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16 }
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mas01cr@239
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17 }
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mas01cr@239
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18 return true;
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mas01cr@239
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19 }
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mas01cr@239
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20
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mas01cr@498
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21 adb_query_results_t *audiodb_query_spec(adb_t *adb, const adb_query_spec_t *qspec) {
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mas01cr@498
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22 adb_qstate_internal_t qstate = {0};
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mas01cr@498
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23 qstate.allowed_keys = new std::set<std::string>;
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mas01cr@498
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24 adb_query_results_t *results;
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mas01cr@498
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25 if(qspec->refine.flags & ADB_REFINE_INCLUDE_KEYLIST) {
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mas01cr@498
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26 for(unsigned int k = 0; k < qspec->refine.include.nkeys; k++) {
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mas01cr@498
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27 qstate.allowed_keys->insert(qspec->refine.include.keys[k]);
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mas01cr@498
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28 }
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mas01cr@498
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29 } else {
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mas01cr@498
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30 for(unsigned int k = 0; k < adb->header->numFiles; k++) {
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mas01cr@498
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31 qstate.allowed_keys->insert((*adb->keys)[k]);
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mas01cr@498
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32 }
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mas01cr@498
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33 }
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mas01cr@498
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34 if(qspec->refine.flags & ADB_REFINE_EXCLUDE_KEYLIST) {
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mas01cr@498
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35 for(unsigned int k = 0; k < qspec->refine.exclude.nkeys; k++) {
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mas01cr@498
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36 qstate.allowed_keys->erase(qspec->refine.exclude.keys[k]);
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mas01cr@498
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37 }
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mas01cr@498
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38 }
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mas01mc@292
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39
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mas01cr@498
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40 switch(qspec->params.distance) {
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mas01cr@498
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41 case ADB_DISTANCE_DOT_PRODUCT:
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mas01cr@498
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42 switch(qspec->params.accumulation) {
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mas01cr@498
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43 case ADB_ACCUMULATION_DB:
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mas01cr@498
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44 qstate.accumulator = new DBAccumulator<adb_result_dist_gt>(qspec->params.npoints);
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mas01cr@498
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45 break;
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mas01cr@498
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46 case ADB_ACCUMULATION_PER_TRACK:
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mas01cr@498
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47 qstate.accumulator = new PerTrackAccumulator<adb_result_dist_gt>(qspec->params.npoints, qspec->params.ntracks);
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mas01cr@498
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48 break;
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mas01cr@498
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49 case ADB_ACCUMULATION_ONE_TO_ONE:
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mas01cr@498
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50 qstate.accumulator = new NearestAccumulator<adb_result_dist_gt>();
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mas01cr@498
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51 break;
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mas01cr@498
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52 default:
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mas01cr@498
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53 goto error;
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mas01cr@239
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54 }
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mas01cr@239
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55 break;
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mas01cr@498
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56 case ADB_DISTANCE_EUCLIDEAN_NORMED:
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mas01cr@498
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57 case ADB_DISTANCE_EUCLIDEAN:
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mas01cr@498
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58 switch(qspec->params.accumulation) {
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mas01cr@498
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59 case ADB_ACCUMULATION_DB:
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mas01cr@498
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60 qstate.accumulator = new DBAccumulator<adb_result_dist_lt>(qspec->params.npoints);
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mas01cr@498
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61 break;
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mas01cr@498
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62 case ADB_ACCUMULATION_PER_TRACK:
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mas01cr@498
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63 qstate.accumulator = new PerTrackAccumulator<adb_result_dist_lt>(qspec->params.npoints, qspec->params.ntracks);
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mas01cr@498
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64 break;
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mas01cr@498
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65 case ADB_ACCUMULATION_ONE_TO_ONE:
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mas01cr@498
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66 qstate.accumulator = new NearestAccumulator<adb_result_dist_lt>();
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mas01cr@498
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67 break;
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mas01cr@498
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68 default:
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mas01cr@498
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69 goto error;
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mas01mc@263
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70 }
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mas01mc@263
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71 break;
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mas01cr@239
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72 default:
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mas01cr@498
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73 goto error;
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mas01mc@329
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74 }
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mas01cr@498
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75
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mas01cr@498
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76 if((qspec->refine.flags & ADB_REFINE_RADIUS) && audiodb_index_exists(adb->path, qspec->refine.radius, qspec->qid.sequence_length)) {
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mas01cr@498
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77 if(audiodb_index_query_loop(adb, qspec, &qstate) < 0) {
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mas01cr@498
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78 goto error;
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mas01cr@498
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79 }
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mas01cr@498
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80 } else {
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mas01cr@498
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81 if(audiodb_query_loop(adb, qspec, &qstate)) {
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mas01cr@498
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82 goto error;
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mas01cr@498
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83 }
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mas01mc@329
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84 }
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mas01mc@292
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85
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mas01cr@498
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86 results = qstate.accumulator->get_points();
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mas01cr@498
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87
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mas01cr@498
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88 delete qstate.accumulator;
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mas01cr@498
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89 delete qstate.allowed_keys;
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mas01cr@498
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90
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mas01cr@498
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91 return results;
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mas01cr@498
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92
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mas01cr@498
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93 error:
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mas01cr@498
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94 if(qstate.accumulator)
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mas01cr@498
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95 delete qstate.accumulator;
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mas01cr@498
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96 if(qstate.allowed_keys)
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mas01cr@498
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97 delete qstate.allowed_keys;
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mas01cr@498
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98 return NULL;
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mas01cr@239
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99 }
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mas01cr@239
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100
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mas01cr@498
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101 int audiodb_query_free_results(adb_t *adb, const adb_query_spec_t *spec, adb_query_results_t *rs) {
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mas01cr@498
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102 free(rs->results);
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mas01cr@498
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103 free(rs);
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mas01cr@498
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104 return 0;
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mas01cr@239
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105 }
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mas01cr@239
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106
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mas01cr@498
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107 static void audiodb_initialize_arrays(adb_t *adb, const adb_query_spec_t *spec, int track, unsigned int numVectors, double *query, double *data_buffer, double **D, double **DD) {
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mas01cr@239
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108 unsigned int j, k, l, w;
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mas01cr@239
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109 double *dp, *qp, *sp;
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mas01cr@239
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110
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mas01cr@498
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111 const unsigned HOP_SIZE = spec->refine.hopsize;
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mas01cr@498
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112 const unsigned wL = spec->qid.sequence_length;
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mas01cr@239
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113
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mas01cr@239
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114 for(j = 0; j < numVectors; j++) {
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mas01cr@239
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115 // Sum products matrix
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mas01cr@498
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116 D[j] = new double[(*adb->track_lengths)[track]];
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mas01cr@239
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117 assert(D[j]);
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mas01cr@239
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118 // Matched filter matrix
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mas01cr@498
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119 DD[j]=new double[(*adb->track_lengths)[track]];
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mas01cr@239
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120 assert(DD[j]);
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mas01cr@239
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121 }
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mas01cr@239
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122
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mas01cr@239
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123 // Dot product
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mas01cr@239
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124 for(j = 0; j < numVectors; j++)
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mas01cr@498
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125 for(k = 0; k < (*adb->track_lengths)[track]; k++){
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mas01cr@498
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126 qp = query + j * adb->header->dim;
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mas01cr@498
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127 sp = data_buffer + k * adb->header->dim;
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mas01cr@239
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128 DD[j][k] = 0.0; // Initialize matched filter array
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mas01cr@239
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129 dp = &D[j][k]; // point to correlation cell j,k
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mas01cr@239
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130 *dp = 0.0; // initialize correlation cell
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mas01cr@498
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131 l = adb->header->dim; // size of vectors
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mas01cr@239
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132 while(l--)
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mas01cr@239
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133 *dp += *qp++ * *sp++;
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mas01cr@239
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134 }
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mas01cr@239
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135
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mas01cr@239
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136 // Matched Filter
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mas01cr@239
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137 // HOP SIZE == 1
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mas01cr@239
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138 double* spd;
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mas01cr@239
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139 if(HOP_SIZE == 1) { // HOP_SIZE = shingleHop
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mas01cr@239
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140 for(w = 0; w < wL; w++) {
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mas01cr@239
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141 for(j = 0; j < numVectors - w; j++) {
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mas01cr@239
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142 sp = DD[j];
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mas01cr@239
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143 spd = D[j+w] + w;
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mas01cr@498
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144 k = (*adb->track_lengths)[track] - w;
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mas01mc@292
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145 while(k--)
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mas01mc@292
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146 *sp++ += *spd++;
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mas01cr@239
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147 }
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mas01cr@239
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148 }
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mas01cr@239
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149 } else { // HOP_SIZE != 1
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mas01cr@239
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150 for(w = 0; w < wL; w++) {
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mas01cr@239
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151 for(j = 0; j < numVectors - w; j += HOP_SIZE) {
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mas01cr@239
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152 sp = DD[j];
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mas01cr@239
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153 spd = D[j+w]+w;
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mas01cr@498
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154 for(k = 0; k < (*adb->track_lengths)[track] - w; k += HOP_SIZE) {
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mas01cr@239
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155 *sp += *spd;
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mas01cr@239
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156 sp += HOP_SIZE;
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mas01cr@239
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157 spd += HOP_SIZE;
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mas01cr@239
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158 }
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mas01cr@239
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159 }
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mas01cr@239
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160 }
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mas01cr@239
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161 }
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mas01cr@239
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162 }
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mas01cr@239
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163
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mas01cr@498
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164 static void audiodb_delete_arrays(int track, unsigned int numVectors, double **D, double **DD) {
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mas01cr@239
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165 if(D != NULL) {
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mas01cr@239
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166 for(unsigned int j = 0; j < numVectors; j++) {
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mas01cr@239
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167 delete[] D[j];
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mas01cr@239
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168 }
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mas01cr@239
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169 }
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mas01cr@239
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170 if(DD != NULL) {
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mas01cr@239
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171 for(unsigned int j = 0; j < numVectors; j++) {
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mas01cr@239
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172 delete[] DD[j];
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mas01cr@239
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173 }
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mas01cr@239
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174 }
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mas01cr@239
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175 }
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mas01cr@239
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176
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mas01cr@498
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177 int audiodb_read_data(adb_t *adb, int trkfid, int track, double **data_buffer_p, size_t *data_buffer_size_p) {
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mas01cr@498
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178 uint32_t track_length = (*adb->track_lengths)[track];
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mas01cr@498
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179 size_t track_size = track_length * sizeof(double) * adb->header->dim;
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mas01cr@498
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180 if (track_size > *data_buffer_size_p) {
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mas01cr@239
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181 if(*data_buffer_p) {
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mas01cr@239
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182 free(*data_buffer_p);
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mas01cr@239
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183 }
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mas01cr@239
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184 {
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mas01cr@498
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185 *data_buffer_size_p = track_size;
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mas01cr@498
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186 void *tmp = malloc(track_size);
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mas01cr@239
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187 if (tmp == NULL) {
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mas01cr@498
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188 goto error;
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mas01cr@239
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189 }
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mas01cr@239
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190 *data_buffer_p = (double *) tmp;
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mas01cr@239
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191 }
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mas01cr@239
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192 }
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mas01cr@239
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193
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mas01cr@498
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194 read_or_goto_error(trkfid, *data_buffer_p, track_size);
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mas01cr@498
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195 return 0;
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mas01cr@498
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196
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mas01cr@498
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197 error:
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mas01cr@498
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198 return 1;
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mas01cr@239
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199 }
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mas01cr@239
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200
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mas01cr@498
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201 int audiodb_track_id_datum(adb_t *adb, uint32_t track_id, adb_datum_t *d) {
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mas01cr@498
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202 off_t track_offset = (*adb->track_offsets)[track_id];
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mas01cr@509
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203 if(adb->header->flags & ADB_HEADER_FLAG_REFERENCES) {
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mas01cr@498
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204 /* create a reference/insert, then use adb_insert_create_datum() */
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mas01cr@498
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205 adb_reference_t reference = {0};
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mas01cr@509
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206 char features[ADB_MAXSTR], power[ADB_MAXSTR], times[ADB_MAXSTR];
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mas01cr@509
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207 lseek(adb->fd, adb->header->dataOffset + track_id * ADB_FILETABLE_ENTRY_SIZE, SEEK_SET);
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mas01cr@509
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208 read_or_goto_error(adb->fd, features, ADB_MAXSTR);
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mas01cr@498
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209 reference.features = features;
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mas01cr@509
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210 if(adb->header->flags & ADB_HEADER_FLAG_POWER) {
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mas01cr@509
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211 lseek(adb->fd, adb->header->powerTableOffset + track_id * ADB_FILETABLE_ENTRY_SIZE, SEEK_SET);
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mas01cr@509
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212 read_or_goto_error(adb->fd, power, ADB_MAXSTR);
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mas01cr@498
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213 reference.power = power;
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mas01cr@498
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214 }
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mas01cr@509
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215 if(adb->header->flags & ADB_HEADER_FLAG_TIMES) {
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mas01cr@509
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216 lseek(adb->fd, adb->header->timesTableOffset + track_id * ADB_FILETABLE_ENTRY_SIZE, SEEK_SET);
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mas01cr@509
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217 read_or_goto_error(adb->fd, times, ADB_MAXSTR);
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mas01cr@498
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218 reference.times = times;
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mas01cr@498
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219 }
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mas01cr@498
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220 return audiodb_insert_create_datum(&reference, d);
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mas01cr@498
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221 } else {
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mas01cr@498
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222 /* initialize from sources of data that we already have */
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mas01cr@498
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223 d->nvectors = (*adb->track_lengths)[track_id];
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mas01cr@498
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224 d->dim = adb->header->dim;
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mas01cr@498
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225 d->key = (*adb->keys)[track_id].c_str();
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mas01cr@498
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226 /* read out stuff from the database tables */
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mas01cr@498
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227 d->data = (double *) malloc(d->nvectors * d->dim * sizeof(double));
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mas01cr@498
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228 lseek(adb->fd, adb->header->dataOffset + track_offset, SEEK_SET);
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mas01cr@498
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229 read_or_goto_error(adb->fd, d->data, d->nvectors * d->dim * sizeof(double));
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mas01cr@509
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230 if(adb->header->flags & ADB_HEADER_FLAG_POWER) {
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mas01cr@498
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231 d->power = (double *) malloc(d->nvectors * sizeof(double));
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mas01cr@498
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232 lseek(adb->fd, adb->header->powerTableOffset + track_offset / d->dim, SEEK_SET);
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mas01cr@498
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233 read_or_goto_error(adb->fd, d->power, d->nvectors * sizeof(double));
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mas01cr@498
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234 }
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mas01cr@509
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235 if(adb->header->flags & ADB_HEADER_FLAG_TIMES) {
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mas01cr@498
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236 d->times = (double *) malloc(2 * d->nvectors * sizeof(double));
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mas01cr@498
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237 lseek(adb->fd, adb->header->timesTableOffset + track_offset / d->dim, SEEK_SET);
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mas01cr@498
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238 read_or_goto_error(adb->fd, d->times, 2 * d->nvectors * sizeof(double));
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mas01cr@498
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239 }
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mas01cr@498
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240 return 0;
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mas01cr@498
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241 }
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mas01cr@498
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242 error:
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mas01cr@498
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243 audiodb_free_datum(d);
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mas01cr@498
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244 return 1;
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mas01cr@498
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245 }
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mas01mc@292
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246
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mas01cr@498
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247 int audiodb_datum_qpointers(adb_datum_t *d, uint32_t sequence_length, double **vector_data, double **vector, adb_qpointers_internal_t *qpointers) {
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mas01cr@498
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248 uint32_t nvectors = d->nvectors;
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mas01cr@498
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249
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mas01cr@498
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250 qpointers->nvectors = nvectors;
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mas01cr@498
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251
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mas01cr@498
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252 size_t vector_size = nvectors * sizeof(double) * d->dim;
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mas01cr@498
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253 *vector_data = new double[vector_size];
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mas01cr@498
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254 memcpy(*vector_data, d->data, vector_size);
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mas01cr@498
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255
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mas01cr@498
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256 qpointers->l2norm_data = new double[vector_size / d->dim];
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mas01cr@498
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257 audiodb_l2norm_buffer(*vector_data, d->dim, nvectors, qpointers->l2norm_data);
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mas01cr@498
|
258 audiodb_sequence_sum(qpointers->l2norm_data, nvectors, sequence_length);
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mas01cr@498
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259 audiodb_sequence_sqrt(qpointers->l2norm_data, nvectors, sequence_length);
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mas01cr@498
|
260
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mas01cr@498
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261 if(d->power) {
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mas01cr@498
|
262 qpointers->power_data = new double[vector_size / d->dim];
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mas01cr@498
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263 memcpy(qpointers->power_data, d->power, vector_size / d->dim);
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mas01cr@498
|
264 audiodb_sequence_sum(qpointers->power_data, nvectors, sequence_length);
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mas01cr@498
|
265 audiodb_sequence_average(qpointers->power_data, nvectors, sequence_length);
|
mas01cr@239
|
266 }
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mas01cr@239
|
267
|
mas01cr@498
|
268 if(d->times) {
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mas01cr@498
|
269 qpointers->mean_duration = new double[1];
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mas01cr@498
|
270 *qpointers->mean_duration = 0;
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mas01cr@498
|
271 for(unsigned int k = 0; k < nvectors; k++) {
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mas01cr@498
|
272 *qpointers->mean_duration += d->times[2*k+1] - d->times[2*k];
|
mas01cr@239
|
273 }
|
mas01cr@498
|
274 *qpointers->mean_duration /= nvectors;
|
mas01cr@239
|
275 }
|
mas01cr@239
|
276
|
mas01cr@498
|
277 *vector = *vector_data;
|
mas01cr@498
|
278 qpointers->l2norm = qpointers->l2norm_data;
|
mas01cr@498
|
279 qpointers->power = qpointers->power_data;
|
mas01cr@498
|
280 return 0;
|
mas01cr@498
|
281 }
|
mas01cr@498
|
282
|
mas01mc@528
|
283 int audiodb_datum_qpointers_partial(adb_datum_t *d, uint32_t sequence_length, double **vector_data,
|
mas01mc@528
|
284 double **vector, adb_qpointers_internal_t *qpointers,
|
mas01mc@528
|
285 adb_qstate_internal_t *qstate){
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mas01mc@528
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286 uint32_t nvectors = d->nvectors;
|
mas01mc@528
|
287 qpointers->nvectors = nvectors;
|
mas01mc@530
|
288 std::priority_queue<PointPair, std::vector<PointPair>, greater<PointPair> > ppairs(*qstate->exact_evaluation_queue);
|
mas01mc@528
|
289
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mas01mc@528
|
290 size_t vector_size = nvectors * sizeof(double) * d->dim;
|
mas01mc@531
|
291
|
mas01mc@528
|
292 if(d->power)
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mas01mc@528
|
293 qpointers->power_data = new double[vector_size / d->dim];
|
mas01mc@528
|
294
|
mas01mc@529
|
295 uint32_t seq_len_dbl = sequence_length*sizeof(double);
|
mas01mc@528
|
296 PointPair pp = ppairs.top();
|
mas01mc@528
|
297 uint32_t tid = pp.trackID;
|
mas01mc@528
|
298
|
mas01mc@528
|
299 while( !ppairs.empty() && pp.trackID==tid){
|
mas01mc@528
|
300 uint32_t spos = pp.spos;
|
mas01mc@529
|
301 #ifdef _LSH_DEBUG_
|
mas01mc@529
|
302 cout << "tid=" << pp.trackID << " qpos=" << pp.qpos << " spos=" << pp.spos << endl;
|
mas01mc@529
|
303 cout.flush();
|
mas01mc@529
|
304 #endif
|
mas01mc@528
|
305
|
mas01mc@528
|
306 if(d->power) {
|
mas01mc@528
|
307 memcpy(qpointers->power_data+spos, d->power+spos, seq_len_dbl);
|
mas01mc@528
|
308 audiodb_sequence_sum(qpointers->power_data+spos, sequence_length, sequence_length);
|
mas01mc@528
|
309 audiodb_sequence_average(qpointers->power_data+spos, sequence_length, sequence_length);
|
mas01mc@528
|
310 }
|
mas01mc@528
|
311 ppairs.pop();
|
mas01mc@528
|
312 if(!ppairs.empty())
|
mas01mc@528
|
313 pp = ppairs.top();
|
mas01mc@528
|
314 }
|
mas01mc@528
|
315
|
mas01mc@528
|
316 if(d->times) {
|
mas01mc@528
|
317 qpointers->mean_duration = new double[1];
|
mas01mc@528
|
318 *qpointers->mean_duration = 0;
|
mas01mc@528
|
319 for(unsigned int k = 0; k < nvectors; k++) {
|
mas01mc@528
|
320 *qpointers->mean_duration += d->times[2*k+1] - d->times[2*k];
|
mas01mc@528
|
321 }
|
mas01mc@528
|
322 *qpointers->mean_duration /= nvectors;
|
mas01mc@528
|
323 }
|
mas01mc@528
|
324
|
mas01mc@531
|
325 *vector = d->data;
|
mas01mc@531
|
326 *vector_data = d->data;
|
mas01mc@531
|
327 qpointers->l2norm = 0 ;
|
mas01mc@528
|
328 qpointers->power = qpointers->power_data;
|
mas01mc@528
|
329 return 0;
|
mas01mc@528
|
330 }
|
mas01mc@528
|
331
|
mas01cr@498
|
332 int audiodb_query_spec_qpointers(adb_t *adb, const adb_query_spec_t *spec, double **vector_data, double **vector, adb_qpointers_internal_t *qpointers) {
|
mas01cr@498
|
333 adb_datum_t *datum;
|
mas01cr@498
|
334 adb_datum_t d = {0};
|
mas01cr@498
|
335 uint32_t sequence_length;
|
mas01cr@498
|
336 uint32_t sequence_start;
|
mas01cr@498
|
337
|
mas01cr@498
|
338 datum = spec->qid.datum;
|
mas01cr@498
|
339 sequence_length = spec->qid.sequence_length;
|
mas01cr@498
|
340 sequence_start = spec->qid.sequence_start;
|
mas01cr@498
|
341
|
mas01cr@498
|
342 if(datum->data) {
|
mas01cr@498
|
343 if(datum->dim != adb->header->dim) {
|
mas01cr@498
|
344 return 1;
|
mas01cr@239
|
345 }
|
mas01cr@498
|
346 /* initialize d, and mark that nothing needs freeing later. */
|
mas01cr@498
|
347 d = *datum;
|
mas01cr@498
|
348 datum = &d;
|
mas01cr@498
|
349 } else if (datum->key) {
|
mas01cr@498
|
350 uint32_t track_id;
|
mas01cr@498
|
351 if((track_id = audiodb_key_index(adb, datum->key)) == (uint32_t) -1) {
|
mas01cr@498
|
352 return 1;
|
mas01cr@498
|
353 }
|
mas01cr@498
|
354 audiodb_track_id_datum(adb, track_id, &d);
|
mas01cr@498
|
355 } else {
|
mas01cr@498
|
356 return 1;
|
mas01cr@239
|
357 }
|
mas01cr@239
|
358
|
mas01cr@498
|
359 /* FIXME: check the overflow logic here */
|
mas01cr@498
|
360 if(sequence_start + sequence_length > d.nvectors) {
|
mas01cr@498
|
361 if(datum != &d) {
|
mas01cr@498
|
362 audiodb_free_datum(&d);
|
mas01cr@498
|
363 }
|
mas01cr@498
|
364 return 1;
|
mas01cr@498
|
365 }
|
mas01cr@239
|
366
|
mas01cr@498
|
367 audiodb_datum_qpointers(&d, sequence_length, vector_data, vector, qpointers);
|
mas01cr@498
|
368
|
mas01cr@498
|
369 /* Finally, if applicable, set up the moving qpointers. */
|
mas01cr@498
|
370 if(spec->qid.flags & ADB_QID_FLAG_EXHAUSTIVE) {
|
mas01cr@498
|
371 /* the qpointers are already at the start, and so correct. */
|
mas01cr@498
|
372 } else {
|
mas01cr@498
|
373 /* adjust the qpointers to point to the correct place in the sequence */
|
mas01cr@498
|
374 *vector = *vector_data + spec->qid.sequence_start * d.dim;
|
mas01cr@498
|
375 qpointers->l2norm = qpointers->l2norm_data + spec->qid.sequence_start;
|
mas01cr@498
|
376 if(d.power) {
|
mas01cr@498
|
377 qpointers->power = qpointers->power_data + spec->qid.sequence_start;
|
mas01cr@239
|
378 }
|
mas01cr@498
|
379 qpointers->nvectors = sequence_length;
|
mas01cr@239
|
380 }
|
mas01cr@498
|
381
|
mas01cr@498
|
382 /* Clean up: free any bits of datum that we have ourselves
|
mas01cr@498
|
383 * allocated. */
|
mas01cr@498
|
384 if(datum != &d) {
|
mas01cr@498
|
385 audiodb_free_datum(&d);
|
mas01cr@498
|
386 }
|
mas01cr@498
|
387
|
mas01cr@498
|
388 return 0;
|
mas01cr@239
|
389 }
|
mas01cr@239
|
390
|
mas01cr@498
|
391 static int audiodb_set_up_dbpointers(adb_t *adb, const adb_query_spec_t *spec, adb_qpointers_internal_t *dbpointers) {
|
mas01cr@498
|
392 uint32_t nvectors = adb->header->length / (adb->header->dim * sizeof(double));
|
mas01cr@498
|
393 uint32_t sequence_length = spec->qid.sequence_length;
|
mas01mc@292
|
394
|
mas01cr@498
|
395 bool using_power = spec->refine.flags & (ADB_REFINE_ABSOLUTE_THRESHOLD|ADB_REFINE_RELATIVE_THRESHOLD);
|
mas01cr@498
|
396 bool using_times = spec->refine.flags & ADB_REFINE_DURATION_RATIO;
|
mas01cr@498
|
397 double *times_table = NULL;
|
mas01cr@498
|
398
|
mas01cr@498
|
399
|
mas01cr@498
|
400 dbpointers->nvectors = nvectors;
|
mas01cr@498
|
401 dbpointers->l2norm_data = new double[nvectors];
|
mas01cr@498
|
402
|
mas01cr@498
|
403 double *snpp = dbpointers->l2norm_data, *sppp = 0;
|
mas01cr@498
|
404 lseek(adb->fd, adb->header->l2normTableOffset, SEEK_SET);
|
mas01cr@498
|
405 read_or_goto_error(adb->fd, dbpointers->l2norm_data, nvectors * sizeof(double));
|
mas01cr@498
|
406
|
mas01cr@498
|
407 if (using_power) {
|
mas01cr@509
|
408 if (!(adb->header->flags & ADB_HEADER_FLAG_POWER)) {
|
mas01cr@498
|
409 goto error;
|
mas01cr@498
|
410 }
|
mas01cr@498
|
411 dbpointers->power_data = new double[nvectors];
|
mas01cr@498
|
412 sppp = dbpointers->power_data;
|
mas01cr@498
|
413 lseek(adb->fd, adb->header->powerTableOffset, SEEK_SET);
|
mas01cr@498
|
414 read_or_goto_error(adb->fd, dbpointers->power_data, nvectors * sizeof(double));
|
mas01mc@292
|
415 }
|
mas01mc@292
|
416
|
mas01cr@498
|
417 for(unsigned int i = 0; i < adb->header->numFiles; i++){
|
mas01cr@498
|
418 size_t track_length = (*adb->track_lengths)[i];
|
mas01cr@498
|
419 if(track_length >= sequence_length) {
|
mas01cr@498
|
420 audiodb_sequence_sum(snpp, track_length, sequence_length);
|
mas01cr@498
|
421 audiodb_sequence_sqrt(snpp, track_length, sequence_length);
|
mas01cr@498
|
422 if (using_power) {
|
mas01cr@498
|
423 audiodb_sequence_sum(sppp, track_length, sequence_length);
|
mas01cr@498
|
424 audiodb_sequence_average(sppp, track_length, sequence_length);
|
mas01cr@498
|
425 }
|
mas01mc@324
|
426 }
|
mas01cr@498
|
427 snpp += track_length;
|
mas01cr@498
|
428 if (using_power) {
|
mas01cr@498
|
429 sppp += track_length;
|
mas01mc@324
|
430 }
|
mas01mc@292
|
431 }
|
mas01mc@292
|
432
|
mas01cr@498
|
433 if (using_times) {
|
mas01cr@509
|
434 if(!(adb->header->flags & ADB_HEADER_FLAG_TIMES)) {
|
mas01cr@498
|
435 goto error;
|
mas01cr@498
|
436 }
|
mas01mc@292
|
437
|
mas01cr@498
|
438 dbpointers->mean_duration = new double[adb->header->numFiles];
|
mas01cr@498
|
439
|
mas01cr@498
|
440 times_table = (double *) malloc(2 * nvectors * sizeof(double));
|
mas01cr@498
|
441 if(!times_table) {
|
mas01cr@498
|
442 goto error;
|
mas01cr@498
|
443 }
|
mas01cr@498
|
444 lseek(adb->fd, adb->header->timesTableOffset, SEEK_SET);
|
mas01cr@498
|
445 read_or_goto_error(adb->fd, times_table, 2 * nvectors * sizeof(double));
|
mas01cr@498
|
446 for(unsigned int k = 0; k < adb->header->numFiles; k++) {
|
mas01cr@498
|
447 size_t track_length = (*adb->track_lengths)[k];
|
mas01cr@498
|
448 unsigned int j;
|
mas01cr@498
|
449 dbpointers->mean_duration[k] = 0.0;
|
mas01cr@498
|
450 for(j = 0; j < track_length; j++) {
|
mas01cr@498
|
451 dbpointers->mean_duration[k] += times_table[2*j+1] - times_table[2*j];
|
mas01mc@292
|
452 }
|
mas01cr@498
|
453 dbpointers->mean_duration[k] /= j;
|
mas01mc@292
|
454 }
|
mas01cr@498
|
455
|
mas01cr@498
|
456 free(times_table);
|
mas01cr@498
|
457 times_table = NULL;
|
mas01mc@292
|
458 }
|
mas01cr@498
|
459
|
mas01cr@498
|
460 dbpointers->l2norm = dbpointers->l2norm_data;
|
mas01cr@498
|
461 dbpointers->power = dbpointers->power_data;
|
mas01cr@498
|
462 return 0;
|
mas01cr@498
|
463
|
mas01cr@498
|
464 error:
|
mas01cr@498
|
465 if(dbpointers->l2norm_data) {
|
mas01cr@498
|
466 delete [] dbpointers->l2norm_data;
|
mas01cr@498
|
467 }
|
mas01cr@498
|
468 if(dbpointers->power_data) {
|
mas01cr@498
|
469 delete [] dbpointers->power_data;
|
mas01cr@498
|
470 }
|
mas01cr@498
|
471 if(dbpointers->mean_duration) {
|
mas01cr@498
|
472 delete [] dbpointers->mean_duration;
|
mas01cr@498
|
473 }
|
mas01cr@498
|
474 if(times_table) {
|
mas01cr@498
|
475 free(times_table);
|
mas01cr@498
|
476 }
|
mas01cr@498
|
477 return 1;
|
mas01cr@498
|
478
|
mas01mc@292
|
479 }
|
mas01mc@292
|
480
|
mas01cr@498
|
481 int audiodb_query_queue_loop(adb_t *adb, const adb_query_spec_t *spec, adb_qstate_internal_t *qstate, double *query, adb_qpointers_internal_t *qpointers) {
|
mas01cr@498
|
482 adb_qpointers_internal_t dbpointers = {0};
|
mas01mc@292
|
483
|
mas01cr@498
|
484 uint32_t sequence_length = spec->qid.sequence_length;
|
mas01cr@498
|
485 bool power_refine = spec->refine.flags & (ADB_REFINE_ABSOLUTE_THRESHOLD|ADB_REFINE_RELATIVE_THRESHOLD);
|
mas01cr@239
|
486
|
mas01cr@498
|
487 if(qstate->exact_evaluation_queue->size() == 0) {
|
mas01cr@498
|
488 return 0;
|
mas01cr@239
|
489 }
|
mas01cr@239
|
490
|
mas01cr@498
|
491 /* We are guaranteed that the order of points is sorted by:
|
mas01cr@498
|
492 * {trackID, spos, qpos} so we can be relatively efficient in
|
mas01cr@498
|
493 * initialization of track data. We assume that points usually
|
mas01cr@498
|
494 * don't overlap, so we will use exhaustive dot product evaluation
|
mas01cr@498
|
495 * (instead of memoization of partial sums, as in query_loop()).
|
mas01cr@498
|
496 */
|
mas01cr@498
|
497 double dist;
|
mas01cr@498
|
498 double *dbdata = 0, *dbdata_pointer;
|
mas01cr@498
|
499 Uns32T currentTrack = 0x80000000; // KLUDGE: Initialize with a value outside of track index range
|
mas01cr@498
|
500 Uns32T npairs = qstate->exact_evaluation_queue->size();
|
mas01mc@527
|
501 #ifdef _LSH_DEBUG_
|
mas01mc@527
|
502 cout << "Num vector pairs to evaluate: " << npairs << "..." << endl;
|
mas01mc@527
|
503 cout.flush();
|
mas01mc@527
|
504 #endif
|
mas01mc@531
|
505 adb_datum_t d = {0};
|
mas01cr@498
|
506 while(npairs--) {
|
mas01cr@498
|
507 PointPair pp = qstate->exact_evaluation_queue->top();
|
mas01cr@498
|
508 if(currentTrack != pp.trackID) {
|
mas01cr@509
|
509 maybe_delete_array(dbpointers.power_data);
|
mas01cr@509
|
510 maybe_delete_array(dbpointers.mean_duration);
|
mas01cr@498
|
511 currentTrack = pp.trackID;
|
mas01mc@531
|
512 audiodb_free_datum(&d);
|
mas01cr@498
|
513 if(audiodb_track_id_datum(adb, pp.trackID, &d)) {
|
mas01cr@498
|
514 delete qstate->exact_evaluation_queue;
|
mas01mc@529
|
515 delete qstate->set;
|
mas01cr@498
|
516 return 1;
|
mas01cr@498
|
517 }
|
mas01mc@531
|
518
|
mas01mc@530
|
519 if(audiodb_datum_qpointers_partial(&d, sequence_length, &dbdata, &dbdata_pointer, &dbpointers, qstate)) {
|
mas01cr@498
|
520 delete qstate->exact_evaluation_queue;
|
mas01mc@529
|
521 delete qstate->set;
|
mas01cr@498
|
522 audiodb_free_datum(&d);
|
mas01cr@498
|
523 return 1;
|
mas01mc@531
|
524 }
|
mas01cr@498
|
525 }
|
mas01cr@498
|
526 Uns32T qPos = (spec->qid.flags & ADB_QID_FLAG_EXHAUSTIVE) ? pp.qpos : 0;
|
mas01cr@498
|
527 Uns32T sPos = pp.spos; // index into l2norm table
|
mas01cr@498
|
528 // Test power thresholds before computing distance
|
mas01cr@498
|
529 if( ( (!power_refine) || audiodb_powers_acceptable(&spec->refine, qpointers->power[qPos], dbpointers.power[sPos])) &&
|
mas01cr@498
|
530 ( qPos<qpointers->nvectors-sequence_length+1 && sPos<(*adb->track_lengths)[pp.trackID]-sequence_length+1 ) ){
|
mas01mc@531
|
531 // Compute distance
|
mas01cr@498
|
532 dist = audiodb_dot_product(query + qPos*adb->header->dim, dbdata + sPos*adb->header->dim, adb->header->dim*sequence_length);
|
mas01mc@531
|
533 double qn = audiodb_dot_product(query + qPos*adb->header->dim, query + qPos*adb->header->dim, adb->header->dim*sequence_length);
|
mas01mc@531
|
534 double sn = audiodb_dot_product(dbdata + sPos*adb->header->dim, dbdata + sPos*adb->header->dim, adb->header->dim*sequence_length);
|
mas01mc@531
|
535 qn = sqrt(qn);
|
mas01mc@531
|
536 sn = sqrt(sn);
|
mas01cr@498
|
537 switch(spec->params.distance) {
|
mas01cr@498
|
538 case ADB_DISTANCE_EUCLIDEAN_NORMED:
|
mas01cr@498
|
539 dist = 2 - (2/(qn*sn))*dist;
|
mas01cr@498
|
540 break;
|
mas01cr@498
|
541 case ADB_DISTANCE_EUCLIDEAN:
|
mas01cr@498
|
542 dist = qn*qn + sn*sn - 2*dist;
|
mas01cr@498
|
543 break;
|
mas01cr@498
|
544 }
|
mas01cr@498
|
545 if((!(spec->refine.flags & ADB_REFINE_RADIUS)) ||
|
mas01cr@509
|
546 dist <= (spec->refine.radius + ADB_DISTANCE_TOLERANCE)) {
|
mas01cr@498
|
547 adb_result_t r;
|
mas01cr@498
|
548 r.key = (*adb->keys)[pp.trackID].c_str();
|
mas01cr@498
|
549 r.dist = dist;
|
mas01cr@498
|
550 r.qpos = pp.qpos;
|
mas01cr@498
|
551 r.ipos = pp.spos;
|
mas01cr@498
|
552 qstate->accumulator->add_point(&r);
|
mas01cr@239
|
553 }
|
mas01cr@239
|
554 }
|
mas01cr@498
|
555 qstate->exact_evaluation_queue->pop();
|
mas01mc@292
|
556 }
|
mas01mc@474
|
557
|
mas01mc@315
|
558 // Cleanup
|
mas01mc@531
|
559 audiodb_free_datum(&d);
|
mas01mc@531
|
560 // maybe_delete_array(dbdata);
|
mas01mc@531
|
561 //maybe_delete_array(dbpointers.l2norm_data);
|
mas01cr@509
|
562 maybe_delete_array(dbpointers.power_data);
|
mas01cr@509
|
563 maybe_delete_array(dbpointers.mean_duration);
|
mas01cr@498
|
564 delete qstate->exact_evaluation_queue;
|
mas01mc@529
|
565 delete qstate->set;
|
mas01cr@498
|
566 return 0;
|
mas01mc@292
|
567 }
|
mas01mc@292
|
568
|
mas01cr@498
|
569 int audiodb_query_loop(adb_t *adb, const adb_query_spec_t *spec, adb_qstate_internal_t *qstate) {
|
mas01cr@498
|
570
|
mas01cr@498
|
571 double *query, *query_data;
|
mas01cr@498
|
572 adb_qpointers_internal_t qpointers = {0}, dbpointers = {0};
|
mas01mc@292
|
573
|
mas01cr@498
|
574 bool power_refine = spec->refine.flags & (ADB_REFINE_ABSOLUTE_THRESHOLD|ADB_REFINE_RELATIVE_THRESHOLD);
|
mas01cr@239
|
575
|
mas01cr@509
|
576 if(adb->header->flags & ADB_HEADER_FLAG_REFERENCES) {
|
mas01cr@498
|
577 /* FIXME: actually it would be nice to support this mode of
|
mas01cr@498
|
578 * operation, but for now... */
|
mas01cr@498
|
579 return 1;
|
mas01cr@498
|
580 }
|
mas01mc@324
|
581
|
mas01cr@498
|
582 if(audiodb_query_spec_qpointers(adb, spec, &query_data, &query, &qpointers)) {
|
mas01cr@498
|
583 return 1;
|
mas01cr@498
|
584 }
|
mas01cr@239
|
585
|
mas01cr@498
|
586 if(audiodb_set_up_dbpointers(adb, spec, &dbpointers)) {
|
mas01cr@498
|
587 return 1;
|
mas01cr@498
|
588 }
|
mas01cr@239
|
589
|
mas01cr@498
|
590 unsigned j,k,track,trackOffset=0, HOP_SIZE = spec->refine.hopsize;
|
mas01cr@498
|
591 unsigned wL = spec->qid.sequence_length;
|
mas01cr@239
|
592 double **D = 0; // Differences query and target
|
mas01cr@239
|
593 double **DD = 0; // Matched filter distance
|
mas01cr@239
|
594
|
mas01cr@498
|
595 D = new double*[qpointers.nvectors]; // pre-allocate
|
mas01cr@498
|
596 DD = new double*[qpointers.nvectors];
|
mas01cr@239
|
597
|
mas01cr@239
|
598 off_t trackIndexOffset;
|
mas01cr@239
|
599
|
mas01cr@239
|
600 // Track loop
|
mas01cr@239
|
601 size_t data_buffer_size = 0;
|
mas01cr@239
|
602 double *data_buffer = 0;
|
mas01cr@498
|
603 lseek(adb->fd, adb->header->dataOffset, SEEK_SET);
|
mas01cr@239
|
604
|
mas01cr@498
|
605 std::set<std::string>::iterator keys_end = qstate->allowed_keys->end();
|
mas01cr@498
|
606 for(track = 0; track < adb->header->numFiles; track++) {
|
mas01cr@498
|
607 unsigned t = track;
|
mas01cr@498
|
608
|
mas01cr@498
|
609 while (qstate->allowed_keys->find((*adb->keys)[track]) == keys_end) {
|
mas01cr@498
|
610 track++;
|
mas01cr@498
|
611 if(track == adb->header->numFiles) {
|
mas01cr@498
|
612 goto loop_finish;
|
mas01cr@239
|
613 }
|
mas01cr@239
|
614 }
|
mas01cr@498
|
615 trackOffset = (*adb->track_offsets)[track];
|
mas01cr@498
|
616 if(track != t) {
|
mas01cr@498
|
617 lseek(adb->fd, adb->header->dataOffset + trackOffset, SEEK_SET);
|
mas01cr@498
|
618 }
|
mas01cr@498
|
619 trackIndexOffset = trackOffset / (adb->header->dim * sizeof(double)); // dbpointers.nvectors offset
|
mas01cr@239
|
620
|
mas01cr@498
|
621 if(audiodb_read_data(adb, adb->fd, track, &data_buffer, &data_buffer_size)) {
|
mas01cr@498
|
622 return 1;
|
mas01mc@292
|
623 }
|
mas01cr@498
|
624 if(wL <= (*adb->track_lengths)[track]) { // test for short sequences
|
mas01cr@498
|
625
|
mas01cr@498
|
626 audiodb_initialize_arrays(adb, spec, track, qpointers.nvectors, query, data_buffer, D, DD);
|
mas01mc@292
|
627
|
mas01cr@498
|
628 if((!(spec->refine.flags & ADB_REFINE_DURATION_RATIO)) ||
|
mas01cr@498
|
629 fabs(dbpointers.mean_duration[track]-qpointers.mean_duration[0]) < qpointers.mean_duration[0]*spec->refine.duration_ratio) {
|
mas01cr@239
|
630
|
mas01cr@239
|
631 // Search for minimum distance by shingles (concatenated vectors)
|
mas01cr@498
|
632 for(j = 0; j <= qpointers.nvectors - wL; j += HOP_SIZE) {
|
mas01cr@498
|
633 for(k = 0; k <= (*adb->track_lengths)[track] - wL; k += HOP_SIZE) {
|
mas01cr@498
|
634 double thisDist = 0;
|
mas01cr@498
|
635 double qn = qpointers.l2norm[j];
|
mas01cr@498
|
636 double sn = dbpointers.l2norm[trackIndexOffset + k];
|
mas01cr@498
|
637 switch(spec->params.distance) {
|
mas01cr@498
|
638 case ADB_DISTANCE_EUCLIDEAN_NORMED:
|
mas01cr@498
|
639 thisDist = 2-(2/(qn*sn))*DD[j][k];
|
mas01cr@498
|
640 break;
|
mas01cr@498
|
641 case ADB_DISTANCE_EUCLIDEAN:
|
mas01cr@498
|
642 thisDist = qn*qn + sn*sn - 2*DD[j][k];
|
mas01cr@498
|
643 break;
|
mas01cr@498
|
644 case ADB_DISTANCE_DOT_PRODUCT:
|
mas01cr@498
|
645 thisDist = DD[j][k];
|
mas01cr@498
|
646 break;
|
mas01cr@498
|
647 }
|
mas01cr@239
|
648 // Power test
|
mas01cr@498
|
649 if ((!power_refine) || audiodb_powers_acceptable(&spec->refine, qpointers.power[j], dbpointers.power[trackIndexOffset + k])) {
|
mas01cr@239
|
650 // radius test
|
mas01cr@498
|
651 if((!(spec->refine.flags & ADB_REFINE_RADIUS)) ||
|
mas01cr@509
|
652 thisDist <= (spec->refine.radius + ADB_DISTANCE_TOLERANCE)) {
|
mas01cr@498
|
653 adb_result_t r;
|
mas01cr@498
|
654 r.key = (*adb->keys)[track].c_str();
|
mas01cr@498
|
655 r.dist = thisDist;
|
mas01cr@498
|
656 if(spec->qid.flags & ADB_QID_FLAG_EXHAUSTIVE) {
|
mas01cr@498
|
657 r.qpos = j;
|
mas01cr@498
|
658 } else {
|
mas01cr@498
|
659 r.qpos = spec->qid.sequence_start;
|
mas01cr@498
|
660 }
|
mas01cr@498
|
661 r.ipos = k;
|
mas01cr@498
|
662 qstate->accumulator->add_point(&r);
|
mas01cr@239
|
663 }
|
mas01cr@239
|
664 }
|
mas01cr@239
|
665 }
|
mas01cr@239
|
666 }
|
mas01cr@239
|
667 } // Duration match
|
mas01cr@498
|
668 audiodb_delete_arrays(track, qpointers.nvectors, D, DD);
|
mas01cr@239
|
669 }
|
mas01cr@239
|
670 }
|
mas01cr@239
|
671
|
mas01cr@498
|
672 loop_finish:
|
mas01cr@498
|
673
|
mas01cr@239
|
674 free(data_buffer);
|
mas01cr@239
|
675
|
mas01cr@239
|
676 // Clean up
|
mas01cr@239
|
677 if(query_data)
|
mas01cr@239
|
678 delete[] query_data;
|
mas01cr@498
|
679 if(qpointers.l2norm_data)
|
mas01cr@498
|
680 delete[] qpointers.l2norm_data;
|
mas01cr@498
|
681 if(qpointers.power_data)
|
mas01cr@498
|
682 delete[] qpointers.power_data;
|
mas01cr@498
|
683 if(qpointers.mean_duration)
|
mas01cr@498
|
684 delete[] qpointers.mean_duration;
|
mas01cr@498
|
685 if(dbpointers.power_data)
|
mas01cr@498
|
686 delete[] dbpointers.power_data;
|
mas01cr@498
|
687 if(dbpointers.l2norm_data)
|
mas01cr@498
|
688 delete[] dbpointers.l2norm_data;
|
mas01cr@239
|
689 if(D)
|
mas01cr@239
|
690 delete[] D;
|
mas01cr@239
|
691 if(DD)
|
mas01cr@239
|
692 delete[] DD;
|
mas01cr@498
|
693 if(dbpointers.mean_duration)
|
mas01cr@498
|
694 delete[] dbpointers.mean_duration;
|
mas01cr@498
|
695
|
mas01cr@498
|
696 return 0;
|
mas01cr@239
|
697 }
|