annotate scripts/timeline_view_movement.py @ 2074:8252be2ba747

Scripts: timeline view of marker movements
author Brecht De Man <b.deman@qmul.ac.uk>
date Tue, 11 Aug 2015 20:49:34 +0200
parents
children 4fb6448759a9
rev   line source
b@2074 1 #!/usr/bin/python
b@2074 2
b@2074 3 import xml.etree.ElementTree as ET
b@2074 4 import os # list files in directory
b@2074 5 import sys # command line arguments
b@2074 6 import matplotlib.pyplot as plt # plots
b@2074 7 import matplotlib.patches as patches # rectangles
b@2074 8
b@2074 9
b@2074 10 # COMMAND LINE ARGUMENTS
b@2074 11
b@2074 12 assert len(sys.argv)<3, "timeline_view_movement takes at most 1 command line argument\n"+\
b@2074 13 "Use: python timeline_view_movement.py [XML_files_location]"
b@2074 14
b@2074 15 # XML results files location
b@2074 16 if len(sys.argv) == 1:
b@2074 17 folder_name = "../saves" # Looks in 'saves/' folder from 'scripts/' folder
b@2074 18 print "Use: python timeline_view_movement.py [XML_files_location]"
b@2074 19 print "Using default path: " + folder_name
b@2074 20 elif len(sys.argv) == 2:
b@2074 21 folder_name = sys.argv[1] # First command line argument is folder
b@2074 22
b@2074 23 # check if folder_name exists
b@2074 24 if not os.path.exists(folder_name):
b@2074 25 #the file is not there
b@2074 26 print "Folder '"+folder_name+"' does not exist."
b@2074 27 sys.exit() # terminate script execution
b@2074 28 elif not os.access(os.path.dirname(folder_name), os.W_OK):
b@2074 29 #the file does exist but write privileges are not given
b@2074 30 print "No write privileges in folder '"+folder_name+"'."
b@2074 31
b@2074 32
b@2074 33 # CONFIGURATION
b@2074 34
b@2074 35 # Folder where to store timelines
b@2074 36 timeline_folder = folder_name + '/timelines_movement/' # Stores in 'saves/timelines_movement/' by default
b@2074 37
b@2074 38 # Font settings
b@2074 39 font = {'weight' : 'bold',
b@2074 40 'size' : 16}
b@2074 41 plt.rc('font', **font)
b@2074 42
b@2074 43 # Colormap for to cycle through
b@2074 44 colormap = ['b', 'g', 'c', 'm', 'y', 'k']
b@2074 45
b@2074 46 # figure size
b@2074 47 fig_width = 25
b@2074 48 fig_height = 10
b@2074 49
b@2074 50
b@2074 51 # CODE
b@2074 52
b@2074 53 # create timeline_folder if not yet created
b@2074 54 if not os.path.exists(timeline_folder):
b@2074 55 os.makedirs(timeline_folder)
b@2074 56
b@2074 57 # get every XML file in folder
b@2074 58 for file in os.listdir(folder_name):
b@2074 59 if file.endswith(".xml"):
b@2074 60 tree = ET.parse(folder_name + '/' + file)
b@2074 61 root = tree.getroot()
b@2074 62 subject_id = file[:-4] # drop '.xml'
b@2074 63
b@2074 64 previous_audioholder_time = 0 # time spent before current audioholder
b@2074 65 time_offset = 0 # test starts at zero
b@2074 66
b@2074 67 # ONE TIMELINE PER PAGE - make new plot per page
b@2074 68
b@2074 69 # get list of all page names
b@2074 70 for audioholder in root.findall("./audioholder"): # iterate over pages
b@2074 71 page_name = audioholder.get('id') # get page name
b@2074 72
b@2074 73 if page_name is None: # ignore 'empty' audio_holders
b@2074 74 print "Skipping empty audioholder name from "+subject_id+"."
b@2074 75 break
b@2074 76
b@2074 77 # subtract total audioholder length from subsequent audioholder event times
b@2074 78 audioholder_time_temp = audioholder.find("./metric/metricresult/[@id='testTime']")
b@2074 79 if audioholder_time_temp is not None:
b@2074 80 audioholder_time = float(audioholder_time_temp.text)
b@2074 81 else:
b@2074 82 print "Skipping audioholder without total time specified from "+subject_id+"."
b@2074 83 break
b@2074 84
b@2074 85 # get audioelements
b@2074 86 audioelements = audioholder.findall("./audioelement")
b@2074 87
b@2074 88 # sort alphabetically
b@2074 89 data = []
b@2074 90 for elem in audioelements: # from http://effbot.org/zone/element-sort.htm
b@2074 91 key = elem.get("id")
b@2074 92 data.append((key, elem))
b@2074 93 data.sort()
b@2074 94
b@2074 95 N_audioelements = len(audioelements) # number of audio elements for this page
b@2074 96 increment = 0 # increased for every new audioelement
b@2074 97
b@2074 98 # get axes handle
b@2074 99 fig = plt.figure(figsize=(fig_width, fig_height))
b@2074 100 ax = fig.add_subplot(111)
b@2074 101
b@2074 102 # for page [page_name], print comments related to fragment [id]
b@2074 103 #for tuple in data:
b@2074 104 # audioelement = tuple[1]
b@2074 105 for tuple in data:
b@2074 106 audioelement = tuple[1]
b@2074 107 if audioelement is not None: # Check it exists
b@2074 108 audio_id = str(audioelement.get('id'))
b@2074 109
b@2074 110 # break if no initial position or move events registered
b@2074 111 initial_position_temp = audioelement.find("./metric/metricresult/[@name='elementInitialPosition']")
b@2074 112 if initial_position_temp is None:
b@2074 113 print "Skipping "+page_name+" from "+subject_id+": does not have initial positions specified."
b@2074 114 break
b@2074 115
b@2074 116 # for this audioelement, loop over all move events
b@2074 117 initial_position = float(initial_position_temp.text)
b@2074 118 move_events = audioelement.findall("./metric/metricresult/[@name='elementTrackerFull']/timepos")
b@2074 119 final_position = float(audioelement.find("./value").text)
b@2074 120
b@2074 121 # display fragment name at start
b@2074 122 plt.text(0,initial_position+0.02,audio_id,color=colormap[increment%len(colormap)]) #,rotation=45
b@2074 123
b@2074 124 # previous position and time
b@2074 125 previous_position = initial_position
b@2074 126 previous_time = 0
b@2074 127
b@2074 128 # draw all segments except final one
b@2074 129 for event in move_events:
b@2074 130 new_time = float(event.find("./time").text)-time_offset
b@2074 131 new_position = float(event.find("./position").text)
b@2074 132 # horizontal line from previous to current time
b@2074 133 plt.plot([previous_time, new_time], # x-values
b@2074 134 [previous_position, previous_position], # y-values
b@2074 135 color=colormap[increment%len(colormap)],
b@2074 136 linewidth=3
b@2074 137 )
b@2074 138 # vertical line from previous to current position
b@2074 139 plt.plot([new_time, new_time], # x-values
b@2074 140 [previous_position, new_position], # y-values
b@2074 141 color=colormap[increment%len(colormap)],
b@2074 142 linewidth=3
b@2074 143 )
b@2074 144
b@2074 145 # update previous_position value
b@2074 146 previous_position = new_position
b@2074 147 previous_time = new_time
b@2074 148
b@2074 149 # draw final segment
b@2074 150 # horizontal line from previous time to end of audioholder
b@2074 151 plt.plot([previous_time, audioholder_time-time_offset], # x-values
b@2074 152 [previous_position, previous_position], # y-values
b@2074 153 color=colormap[increment%len(colormap)],
b@2074 154 linewidth=3
b@2074 155 )
b@2074 156
b@2074 157 # display fragment name at end
b@2074 158 plt.text(audioholder_time-time_offset,previous_position,\
b@2074 159 audio_id,color=colormap[increment%len(colormap)]) #,rotation=45
b@2074 160
b@2074 161 # for this audioelement, loop over all listen events
b@2074 162 # listen_events = audioelement.findall("./metric/metricresult/[@name='elementListenTracker']/event")
b@2074 163 # for event in listen_events:
b@2074 164 # # get testtime: start and stop
b@2074 165 # start_time = float(event.find('testtime').get('start'))
b@2074 166 # stop_time = float(event.find('testtime').get('stop'))
b@2074 167
b@2074 168
b@2074 169 increment+=1 # to next audioelement
b@2074 170
b@2074 171 last_audioholder_duration = audioholder_time-time_offset
b@2074 172 time_offset = audioholder_time
b@2074 173
b@2074 174
b@2074 175 # set plot parameters
b@2074 176 plt.title('Timeline ' + file + ": "+page_name)
b@2074 177 plt.xlabel('Time [seconds]')
b@2074 178 plt.xlim(0, last_audioholder_duration)
b@2074 179 plt.ylabel('Rating') # default
b@2074 180 plt.ylim(0, 1) # rating between 0 and 1
b@2074 181
b@2074 182 #y-ticks: labels on rating axis
b@2074 183 label_positions = []
b@2074 184 label_text = []
b@2074 185 scale_tags = root.findall("./BrowserEvalProjectDocument/audioHolder/interface/scale")
b@2074 186 scale_title = root.find("./BrowserEvalProjectDocument/audioHolder/interface/title")
b@2074 187 for tag in scale_tags:
b@2074 188 label_positions.append(float(tag.get('position'))/100) # on a scale from 0 to 100
b@2074 189 label_text.append(tag.text)
b@2074 190 if len(label_positions) > 0:
b@2074 191 plt.yticks(label_positions, label_text) # show rating axis labels
b@2074 192 # set label Y-axis
b@2074 193 if scale_title is not None:
b@2074 194 plt.ylabel(scale_title.text)
b@2074 195
b@2074 196 #plt.show() # uncomment to show plot; comment when just saving
b@2074 197 #exit()
b@2074 198
b@2074 199 plt.savefig(timeline_folder+subject_id+"-"+page_name+".pdf", bbox_inches='tight')
b@2074 200 plt.close()
b@2074 201