annotate scripts/timeline_view_movement.py @ 1807:4a492e3b0488

Scripts: timeline view of marker movements
author Brecht De Man <b.deman@qmul.ac.uk>
date Tue, 11 Aug 2015 20:49:34 +0200
parents
children 4fb6448759a9
rev   line source
b@1807 1 #!/usr/bin/python
b@1807 2
b@1807 3 import xml.etree.ElementTree as ET
b@1807 4 import os # list files in directory
b@1807 5 import sys # command line arguments
b@1807 6 import matplotlib.pyplot as plt # plots
b@1807 7 import matplotlib.patches as patches # rectangles
b@1807 8
b@1807 9
b@1807 10 # COMMAND LINE ARGUMENTS
b@1807 11
b@1807 12 assert len(sys.argv)<3, "timeline_view_movement takes at most 1 command line argument\n"+\
b@1807 13 "Use: python timeline_view_movement.py [XML_files_location]"
b@1807 14
b@1807 15 # XML results files location
b@1807 16 if len(sys.argv) == 1:
b@1807 17 folder_name = "../saves" # Looks in 'saves/' folder from 'scripts/' folder
b@1807 18 print "Use: python timeline_view_movement.py [XML_files_location]"
b@1807 19 print "Using default path: " + folder_name
b@1807 20 elif len(sys.argv) == 2:
b@1807 21 folder_name = sys.argv[1] # First command line argument is folder
b@1807 22
b@1807 23 # check if folder_name exists
b@1807 24 if not os.path.exists(folder_name):
b@1807 25 #the file is not there
b@1807 26 print "Folder '"+folder_name+"' does not exist."
b@1807 27 sys.exit() # terminate script execution
b@1807 28 elif not os.access(os.path.dirname(folder_name), os.W_OK):
b@1807 29 #the file does exist but write privileges are not given
b@1807 30 print "No write privileges in folder '"+folder_name+"'."
b@1807 31
b@1807 32
b@1807 33 # CONFIGURATION
b@1807 34
b@1807 35 # Folder where to store timelines
b@1807 36 timeline_folder = folder_name + '/timelines_movement/' # Stores in 'saves/timelines_movement/' by default
b@1807 37
b@1807 38 # Font settings
b@1807 39 font = {'weight' : 'bold',
b@1807 40 'size' : 16}
b@1807 41 plt.rc('font', **font)
b@1807 42
b@1807 43 # Colormap for to cycle through
b@1807 44 colormap = ['b', 'g', 'c', 'm', 'y', 'k']
b@1807 45
b@1807 46 # figure size
b@1807 47 fig_width = 25
b@1807 48 fig_height = 10
b@1807 49
b@1807 50
b@1807 51 # CODE
b@1807 52
b@1807 53 # create timeline_folder if not yet created
b@1807 54 if not os.path.exists(timeline_folder):
b@1807 55 os.makedirs(timeline_folder)
b@1807 56
b@1807 57 # get every XML file in folder
b@1807 58 for file in os.listdir(folder_name):
b@1807 59 if file.endswith(".xml"):
b@1807 60 tree = ET.parse(folder_name + '/' + file)
b@1807 61 root = tree.getroot()
b@1807 62 subject_id = file[:-4] # drop '.xml'
b@1807 63
b@1807 64 previous_audioholder_time = 0 # time spent before current audioholder
b@1807 65 time_offset = 0 # test starts at zero
b@1807 66
b@1807 67 # ONE TIMELINE PER PAGE - make new plot per page
b@1807 68
b@1807 69 # get list of all page names
b@1807 70 for audioholder in root.findall("./audioholder"): # iterate over pages
b@1807 71 page_name = audioholder.get('id') # get page name
b@1807 72
b@1807 73 if page_name is None: # ignore 'empty' audio_holders
b@1807 74 print "Skipping empty audioholder name from "+subject_id+"."
b@1807 75 break
b@1807 76
b@1807 77 # subtract total audioholder length from subsequent audioholder event times
b@1807 78 audioholder_time_temp = audioholder.find("./metric/metricresult/[@id='testTime']")
b@1807 79 if audioholder_time_temp is not None:
b@1807 80 audioholder_time = float(audioholder_time_temp.text)
b@1807 81 else:
b@1807 82 print "Skipping audioholder without total time specified from "+subject_id+"."
b@1807 83 break
b@1807 84
b@1807 85 # get audioelements
b@1807 86 audioelements = audioholder.findall("./audioelement")
b@1807 87
b@1807 88 # sort alphabetically
b@1807 89 data = []
b@1807 90 for elem in audioelements: # from http://effbot.org/zone/element-sort.htm
b@1807 91 key = elem.get("id")
b@1807 92 data.append((key, elem))
b@1807 93 data.sort()
b@1807 94
b@1807 95 N_audioelements = len(audioelements) # number of audio elements for this page
b@1807 96 increment = 0 # increased for every new audioelement
b@1807 97
b@1807 98 # get axes handle
b@1807 99 fig = plt.figure(figsize=(fig_width, fig_height))
b@1807 100 ax = fig.add_subplot(111)
b@1807 101
b@1807 102 # for page [page_name], print comments related to fragment [id]
b@1807 103 #for tuple in data:
b@1807 104 # audioelement = tuple[1]
b@1807 105 for tuple in data:
b@1807 106 audioelement = tuple[1]
b@1807 107 if audioelement is not None: # Check it exists
b@1807 108 audio_id = str(audioelement.get('id'))
b@1807 109
b@1807 110 # break if no initial position or move events registered
b@1807 111 initial_position_temp = audioelement.find("./metric/metricresult/[@name='elementInitialPosition']")
b@1807 112 if initial_position_temp is None:
b@1807 113 print "Skipping "+page_name+" from "+subject_id+": does not have initial positions specified."
b@1807 114 break
b@1807 115
b@1807 116 # for this audioelement, loop over all move events
b@1807 117 initial_position = float(initial_position_temp.text)
b@1807 118 move_events = audioelement.findall("./metric/metricresult/[@name='elementTrackerFull']/timepos")
b@1807 119 final_position = float(audioelement.find("./value").text)
b@1807 120
b@1807 121 # display fragment name at start
b@1807 122 plt.text(0,initial_position+0.02,audio_id,color=colormap[increment%len(colormap)]) #,rotation=45
b@1807 123
b@1807 124 # previous position and time
b@1807 125 previous_position = initial_position
b@1807 126 previous_time = 0
b@1807 127
b@1807 128 # draw all segments except final one
b@1807 129 for event in move_events:
b@1807 130 new_time = float(event.find("./time").text)-time_offset
b@1807 131 new_position = float(event.find("./position").text)
b@1807 132 # horizontal line from previous to current time
b@1807 133 plt.plot([previous_time, new_time], # x-values
b@1807 134 [previous_position, previous_position], # y-values
b@1807 135 color=colormap[increment%len(colormap)],
b@1807 136 linewidth=3
b@1807 137 )
b@1807 138 # vertical line from previous to current position
b@1807 139 plt.plot([new_time, new_time], # x-values
b@1807 140 [previous_position, new_position], # y-values
b@1807 141 color=colormap[increment%len(colormap)],
b@1807 142 linewidth=3
b@1807 143 )
b@1807 144
b@1807 145 # update previous_position value
b@1807 146 previous_position = new_position
b@1807 147 previous_time = new_time
b@1807 148
b@1807 149 # draw final segment
b@1807 150 # horizontal line from previous time to end of audioholder
b@1807 151 plt.plot([previous_time, audioholder_time-time_offset], # x-values
b@1807 152 [previous_position, previous_position], # y-values
b@1807 153 color=colormap[increment%len(colormap)],
b@1807 154 linewidth=3
b@1807 155 )
b@1807 156
b@1807 157 # display fragment name at end
b@1807 158 plt.text(audioholder_time-time_offset,previous_position,\
b@1807 159 audio_id,color=colormap[increment%len(colormap)]) #,rotation=45
b@1807 160
b@1807 161 # for this audioelement, loop over all listen events
b@1807 162 # listen_events = audioelement.findall("./metric/metricresult/[@name='elementListenTracker']/event")
b@1807 163 # for event in listen_events:
b@1807 164 # # get testtime: start and stop
b@1807 165 # start_time = float(event.find('testtime').get('start'))
b@1807 166 # stop_time = float(event.find('testtime').get('stop'))
b@1807 167
b@1807 168
b@1807 169 increment+=1 # to next audioelement
b@1807 170
b@1807 171 last_audioholder_duration = audioholder_time-time_offset
b@1807 172 time_offset = audioholder_time
b@1807 173
b@1807 174
b@1807 175 # set plot parameters
b@1807 176 plt.title('Timeline ' + file + ": "+page_name)
b@1807 177 plt.xlabel('Time [seconds]')
b@1807 178 plt.xlim(0, last_audioholder_duration)
b@1807 179 plt.ylabel('Rating') # default
b@1807 180 plt.ylim(0, 1) # rating between 0 and 1
b@1807 181
b@1807 182 #y-ticks: labels on rating axis
b@1807 183 label_positions = []
b@1807 184 label_text = []
b@1807 185 scale_tags = root.findall("./BrowserEvalProjectDocument/audioHolder/interface/scale")
b@1807 186 scale_title = root.find("./BrowserEvalProjectDocument/audioHolder/interface/title")
b@1807 187 for tag in scale_tags:
b@1807 188 label_positions.append(float(tag.get('position'))/100) # on a scale from 0 to 100
b@1807 189 label_text.append(tag.text)
b@1807 190 if len(label_positions) > 0:
b@1807 191 plt.yticks(label_positions, label_text) # show rating axis labels
b@1807 192 # set label Y-axis
b@1807 193 if scale_title is not None:
b@1807 194 plt.ylabel(scale_title.text)
b@1807 195
b@1807 196 #plt.show() # uncomment to show plot; comment when just saving
b@1807 197 #exit()
b@1807 198
b@1807 199 plt.savefig(timeline_folder+subject_id+"-"+page_name+".pdf", bbox_inches='tight')
b@1807 200 plt.close()
b@1807 201