annotate scripts/score_parser.py @ 1106:282dfb8076f5

Merge default to dev_main
author Nicholas Jillings <n.g.r.jillings@se14.qmul.ac.uk>
date Wed, 17 Feb 2016 11:29:18 +0000
parents
children b5bf2f57187c a4ad9e55b5b8
rev   line source
n@1106 1 #!/usr/bin/python
n@1106 2
n@1106 3 import xml.etree.ElementTree as ET
n@1106 4 import os
n@1106 5 import sys
n@1106 6 import csv
n@1106 7
n@1106 8 # COMMAND LINE ARGUMENTS
n@1106 9
n@1106 10 assert len(sys.argv)<3, "score_parser takes at most 1 command line argument\n"+\
n@1106 11 "Use: python score_parser.py [rating_folder_location]"
n@1106 12
n@1106 13 # XML results files location
n@1106 14 if len(sys.argv) == 1:
n@1106 15 folder_name = "../saves" # Looks in 'saves/' folder from 'scripts/' folder
n@1106 16 print "Use: python score_parser.py [rating_folder_location]"
n@1106 17 print "Using default path: " + folder_name
n@1106 18 elif len(sys.argv) == 2:
n@1106 19 folder_name = sys.argv[1] # First command line argument is folder
n@1106 20
n@1106 21 # check if folder_name exists
n@1106 22 if not os.path.exists(folder_name):
n@1106 23 #the file is not there
n@1106 24 print "Folder '"+folder_name+"' does not exist."
n@1106 25 sys.exit() # terminate script execution
n@1106 26 elif not os.access(os.path.dirname(folder_name), os.W_OK):
n@1106 27 #the file does exist but write privileges are not given
n@1106 28 print "No write privileges in folder '"+folder_name+"'."
n@1106 29
n@1106 30
n@1106 31 # CODE
n@1106 32
n@1106 33 # remember which files have been opened this time
n@1106 34 file_history = []
n@1106 35
n@1106 36 # get every XML file in folder
n@1106 37 for file_name in os.listdir(folder_name):
n@1106 38 if file_name.endswith(".xml"):
n@1106 39 tree = ET.parse(folder_name + '/' + file_name)
n@1106 40 root = tree.getroot()
n@1106 41
n@1106 42 # get subject ID from XML file
n@1106 43 subject_id = file_name[:-4] # file name (without extension) as subject ID
n@1106 44
n@1106 45 # get list of all pages this subject evaluated
n@1106 46 for audioholder in root.findall("./audioholder"): # iterate over pages
n@1106 47 page_name = audioholder.get('id') # get page name
n@1106 48
n@1106 49 if page_name is None: # ignore 'empty' audio_holders
n@1106 50 print "WARNING: " + file_name + " contains empty audio holder. (score_parser.py)"
n@1106 51 break
n@1106 52
n@1106 53 file_name = folder_name+'/ratings/'+page_name+'-ratings.csv' # score file name
n@1106 54
n@1106 55 # create folder 'ratings' if not yet created
n@1106 56 if not os.path.exists(folder_name + '/ratings'):
n@1106 57 os.makedirs(folder_name + '/ratings')
n@1106 58
n@1106 59 # header: fragment IDs in 'alphabetical' order
n@1106 60 # go to fragment column, or create new column if it doesn't exist yet
n@1106 61
n@1106 62 # get array of audio elements and number of audio elements
n@1106 63 audiolist = audioholder.findall("./audioelement")
n@1106 64 n_fragments = len(audiolist)
n@1106 65
n@1106 66 # get alphabetical array of fragment IDs from this subject's XML
n@1106 67 fragmentnamelist = [] # make empty list
n@1106 68 for audioelement in audiolist: # iterate over all audioelements
n@1106 69 fragmentnamelist.append(audioelement.get('id')) # add to list
n@1106 70
n@1106 71
n@1106 72 # if file exists, get header and add any 'new' fragments not yet in the header
n@1106 73 if os.path.isfile(file_name):
n@1106 74 with open(file_name, 'r') as readfile:
n@1106 75 filereader = csv.reader(readfile, delimiter=',')
n@1106 76 headerrow = filereader.next()
n@1106 77
n@1106 78 # If file hasn't been opened yet this time, remove all rows except header
n@1106 79 if file_name not in file_history:
n@1106 80 with open(file_name, 'w') as writefile:
n@1106 81 filewriter = csv.writer(writefile, delimiter=',')
n@1106 82 headerrow = sorted(headerrow)
n@1106 83 filewriter.writerow(headerrow)
n@1106 84 file_history.append(file_name)
n@1106 85
n@1106 86 # Which of the fragments are in fragmentnamelist but not in headerrow?
n@1106 87 newfragments = list(set(fragmentnamelist)-set(headerrow))
n@1106 88 newfragments = sorted(newfragments) # new fragments in alphabetical order
n@1106 89 # If not empty, read file and rewrite adding extra columns
n@1106 90 if newfragments: # if not empty
n@1106 91 with open('temp.csv', 'w') as writefile:
n@1106 92 filewriter = csv.writer(writefile, delimiter=',')
n@1106 93 filewriter.writerow(headerrow + newfragments) # write new header
n@1106 94 with open(file_name, 'r') as readfile:
n@1106 95 filereader = csv.reader(readfile, delimiter=',')
n@1106 96 filereader.next() # skip header
n@1106 97 for row in filereader: # rewrite row plus empty cells for every new fragment name
n@1106 98 filewriter.writerow(row + ['']*len(newfragments))
n@1106 99 os.rename('temp.csv', file_name) # replace old file with temp file
n@1106 100 headerrow = headerrow + newfragments
n@1106 101
n@1106 102
n@1106 103 # if file does not exist yet, create file and make header
n@1106 104 else:
n@1106 105 headerrow = sorted(fragmentnamelist) # sort alphabetically
n@1106 106 headerrow.insert(0,'')
n@1106 107 fragmentnamelist = fragmentnamelist[1:] #HACKY FIX inserting in firstrow also affects fragmentnamelist
n@1106 108 with open(file_name, 'w') as writefile:
n@1106 109 filewriter = csv.writer(writefile, delimiter=',')
n@1106 110 filewriter.writerow(headerrow)
n@1106 111 file_history.append(file_name)
n@1106 112
n@1106 113 # open file to write for this page
n@1106 114 writefile = open(file_name, 'a')
n@1106 115 filewriter = csv.writer(writefile, delimiter=',')
n@1106 116
n@1106 117 # prepare row to be written for this subject for this page
n@1106 118 ratingrow = [subject_id]
n@1106 119
n@1106 120 # get scores related to fragment [id]
n@1106 121 for fragmentname in headerrow[1:]: # iterate over fragments in header (skip first empty column)
n@1106 122 elementvalue = audioholder.find("./audioelement/[@id='"
n@1106 123 + fragmentname
n@1106 124 + "']/value")
n@1106 125 if hasattr(elementvalue, 'text'): # if rating for this fragment exists
n@1106 126 ratingrow.append(elementvalue.text) # add to rating row
n@1106 127 else: # if this subject has not rated this fragment
n@1106 128 ratingrow.append('') # append empty cell
n@1106 129
n@1106 130 # write row: [subject ID, rating fragment ID 1, ..., rating fragment ID M]
n@1106 131 if any(ratingrow[1:]): # append to file if row non-empty (except subject name)
n@1106 132 filewriter.writerow(ratingrow)