annotate data/fileio/CSVFormat.cpp @ 1510:5f1b2a117a4f import-audio-data

Debug etc
author Chris Cannam
date Wed, 05 Sep 2018 11:56:45 +0100
parents 48e9f538e6e9
children c9c2aa17439a
rev   line source
Chris@392 1 /* -*- c-basic-offset: 4 indent-tabs-mode: nil -*- vi:set ts=8 sts=4 sw=4: */
Chris@392 2
Chris@392 3 /*
Chris@392 4 Sonic Visualiser
Chris@392 5 An audio file viewer and annotation editor.
Chris@392 6 Centre for Digital Music, Queen Mary, University of London.
Chris@392 7 This file copyright 2006 Chris Cannam.
Chris@392 8
Chris@392 9 This program is free software; you can redistribute it and/or
Chris@392 10 modify it under the terms of the GNU General Public License as
Chris@392 11 published by the Free Software Foundation; either version 2 of the
Chris@392 12 License, or (at your option) any later version. See the file
Chris@392 13 COPYING included with this distribution for more information.
Chris@392 14 */
Chris@392 15
Chris@392 16 #include "CSVFormat.h"
Chris@392 17
Chris@629 18 #include "base/StringBits.h"
Chris@629 19
Chris@392 20 #include <QFile>
Chris@392 21 #include <QString>
Chris@392 22 #include <QRegExp>
Chris@392 23 #include <QStringList>
Chris@392 24 #include <QTextStream>
Chris@392 25
Chris@392 26 #include <iostream>
Chris@392 27
Chris@1362 28 #include "base/Debug.h"
Chris@1362 29
Chris@629 30 CSVFormat::CSVFormat(QString path) :
Chris@629 31 m_separator(""),
Chris@392 32 m_sampleRate(44100),
Chris@392 33 m_windowSize(1024),
Chris@629 34 m_allowQuoting(true)
Chris@392 35 {
Chris@629 36 guessFormatFor(path);
Chris@629 37 }
Chris@629 38
Chris@629 39 void
Chris@629 40 CSVFormat::guessFormatFor(QString path)
Chris@629 41 {
Chris@629 42 m_modelType = TwoDimensionalModel;
Chris@629 43 m_timingType = ExplicitTiming;
Chris@629 44 m_timeUnits = TimeSeconds;
Chris@629 45
Chris@629 46 m_maxExampleCols = 0;
Chris@629 47 m_columnCount = 0;
Chris@629 48 m_variableColumnCount = false;
Chris@629 49
Chris@629 50 m_example.clear();
Chris@629 51 m_columnQualities.clear();
Chris@629 52 m_columnPurposes.clear();
Chris@629 53 m_prevValues.clear();
Chris@629 54
Chris@629 55 QFile file(path);
Chris@392 56 if (!file.exists()) return;
Chris@392 57 if (!file.open(QIODevice::ReadOnly | QIODevice::Text)) return;
Chris@392 58
Chris@392 59 QTextStream in(&file);
Chris@392 60 in.seek(0);
Chris@392 61
Chris@629 62 int lineno = 0;
Chris@392 63
Chris@392 64 while (!in.atEnd()) {
Chris@392 65
Chris@392 66 // See comment about line endings in CSVFileReader::load()
Chris@392 67
Chris@392 68 QString chunk = in.readLine();
Chris@392 69 QStringList lines = chunk.split('\r', QString::SkipEmptyParts);
Chris@392 70
Chris@897 71 for (int li = 0; li < lines.size(); ++li) {
Chris@392 72
Chris@392 73 QString line = lines[li];
Chris@629 74 if (line.startsWith("#") || line == "") continue;
Chris@392 75
Chris@629 76 guessQualities(line, lineno);
Chris@392 77
Chris@840 78 ++lineno;
Chris@629 79 }
Chris@840 80
Chris@840 81 if (lineno >= 50) break;
Chris@629 82 }
Chris@392 83
Chris@629 84 guessPurposes();
Chris@629 85 }
Chris@629 86
Chris@629 87 void
Chris@629 88 CSVFormat::guessSeparator(QString line)
Chris@629 89 {
Chris@629 90 char candidates[] = { ',', '\t', ' ', '|', '/', ':' };
Chris@897 91 for (int i = 0; i < int(sizeof(candidates)/sizeof(candidates[0])); ++i) {
Chris@629 92 if (StringBits::split(line, candidates[i], m_allowQuoting).size() >= 2) {
Chris@629 93 m_separator = candidates[i];
Chris@1510 94 SVDEBUG << "Estimated column separator: '" << m_separator
Chris@1510 95 << "'" << endl;
Chris@629 96 return;
Chris@629 97 }
Chris@629 98 }
Chris@629 99 }
Chris@629 100
Chris@629 101 void
Chris@629 102 CSVFormat::guessQualities(QString line, int lineno)
Chris@629 103 {
Chris@629 104 if (m_separator == "") guessSeparator(line);
Chris@629 105
Chris@1362 106 QStringList list = StringBits::split(line, getSeparator(), m_allowQuoting);
Chris@629 107
Chris@629 108 int cols = list.size();
Chris@991 109 if (lineno == 0 || (cols > m_columnCount)) m_columnCount = cols;
Chris@629 110 if (cols != m_columnCount) m_variableColumnCount = true;
Chris@629 111
Chris@629 112 // All columns are regarded as having these qualities until we see
Chris@629 113 // something that indicates otherwise:
Chris@629 114
Chris@629 115 ColumnQualities defaultQualities =
Chris@1021 116 ColumnNumeric | ColumnIntegral | ColumnIncreasing | ColumnNearEmpty;
Chris@629 117
Chris@629 118 for (int i = 0; i < cols; ++i) {
Chris@1429 119
Chris@629 120 while (m_columnQualities.size() <= i) {
Chris@629 121 m_columnQualities.push_back(defaultQualities);
Chris@629 122 m_prevValues.push_back(0.f);
Chris@629 123 }
Chris@629 124
Chris@629 125 QString s(list[i]);
Chris@629 126 bool ok = false;
Chris@629 127
Chris@629 128 ColumnQualities qualities = m_columnQualities[i];
Chris@629 129
Chris@629 130 bool numeric = (qualities & ColumnNumeric);
Chris@629 131 bool integral = (qualities & ColumnIntegral);
Chris@629 132 bool increasing = (qualities & ColumnIncreasing);
Chris@629 133 bool large = (qualities & ColumnLarge); // this one defaults to off
Chris@1021 134 bool emptyish = (qualities & ColumnNearEmpty);
Chris@629 135
Chris@1021 136 if (lineno > 1 && s.trimmed() != "") {
Chris@1021 137 emptyish = false;
Chris@1021 138 }
Chris@1021 139
Chris@629 140 float value = 0.f;
Chris@629 141
Chris@629 142 //!!! how to take into account headers?
Chris@629 143
Chris@629 144 if (numeric) {
Chris@629 145 value = s.toFloat(&ok);
Chris@629 146 if (!ok) {
Chris@629 147 value = (float)StringBits::stringToDoubleLocaleFree(s, &ok);
Chris@629 148 }
Chris@629 149 if (ok) {
Chris@629 150 if (lineno < 2 && value > 1000.f) large = true;
Chris@629 151 } else {
Chris@629 152 numeric = false;
Chris@629 153 }
Chris@629 154 }
Chris@629 155
Chris@629 156 if (numeric) {
Chris@629 157
Chris@629 158 if (integral) {
Chris@629 159 if (s.contains('.') || s.contains(',')) {
Chris@629 160 integral = false;
Chris@392 161 }
Chris@392 162 }
Chris@392 163
Chris@629 164 if (increasing) {
Chris@629 165 if (lineno > 0 && value <= m_prevValues[i]) {
Chris@629 166 increasing = false;
Chris@392 167 }
Chris@392 168 }
Chris@392 169
Chris@629 170 m_prevValues[i] = value;
Chris@629 171 }
Chris@392 172
Chris@629 173 m_columnQualities[i] =
Chris@629 174 (numeric ? ColumnNumeric : 0) |
Chris@629 175 (integral ? ColumnIntegral : 0) |
Chris@629 176 (increasing ? ColumnIncreasing : 0) |
Chris@1021 177 (large ? ColumnLarge : 0) |
Chris@1021 178 (emptyish ? ColumnNearEmpty : 0);
Chris@629 179 }
Chris@392 180
Chris@629 181 if (lineno < 10) {
Chris@629 182 m_example.push_back(list);
Chris@629 183 if (lineno == 0 || cols > m_maxExampleCols) {
Chris@629 184 m_maxExampleCols = cols;
Chris@392 185 }
Chris@392 186 }
Chris@392 187
Chris@1362 188 if (lineno < 10) {
Chris@1362 189 SVDEBUG << "Estimated column qualities for line " << lineno << " (reporting up to first 10): ";
Chris@1362 190 for (int i = 0; i < m_columnCount; ++i) {
Chris@1362 191 SVDEBUG << int(m_columnQualities[i]) << " ";
Chris@1362 192 }
Chris@1362 193 SVDEBUG << endl;
Chris@1362 194 }
Chris@629 195 }
Chris@629 196
Chris@629 197 void
Chris@629 198 CSVFormat::guessPurposes()
Chris@629 199 {
Chris@629 200 m_timingType = CSVFormat::ImplicitTiming;
Chris@629 201 m_timeUnits = CSVFormat::TimeWindows;
Chris@1429 202
Chris@629 203 int timingColumnCount = 0;
Chris@1021 204
Chris@1510 205 SVDEBUG << "Estimated column qualities overall: ";
Chris@1510 206 for (int i = 0; i < m_columnCount; ++i) {
Chris@1510 207 SVDEBUG << int(m_columnQualities[i]) << " ";
Chris@1510 208 }
Chris@1510 209 SVDEBUG << endl;
Chris@1510 210
Chris@1021 211 // if our first column has zero or one entries in it and the rest
Chris@1021 212 // have more, then we'll default to ignoring the first column and
Chris@1021 213 // counting the next one as primary. (e.g. Sonic Annotator output
Chris@1021 214 // with filename at start of first column.)
Chris@1021 215
Chris@1021 216 int primaryColumnNo = 0;
Chris@1021 217
Chris@1021 218 if (m_columnCount >= 2) {
Chris@1021 219 if ( (m_columnQualities[0] & ColumnNearEmpty) &&
Chris@1021 220 !(m_columnQualities[1] & ColumnNearEmpty)) {
Chris@1021 221 primaryColumnNo = 1;
Chris@1021 222 }
Chris@1021 223 }
Chris@629 224
Chris@629 225 for (int i = 0; i < m_columnCount; ++i) {
Chris@629 226
Chris@629 227 ColumnPurpose purpose = ColumnUnknown;
Chris@1021 228
Chris@1021 229 if (i < primaryColumnNo) {
Chris@1021 230 setColumnPurpose(i, purpose);
Chris@1021 231 continue;
Chris@1021 232 }
Chris@1021 233
Chris@1021 234 bool primary = (i == primaryColumnNo);
Chris@392 235
Chris@629 236 ColumnQualities qualities = m_columnQualities[i];
Chris@392 237
Chris@629 238 bool numeric = (qualities & ColumnNumeric);
Chris@629 239 bool integral = (qualities & ColumnIntegral);
Chris@629 240 bool increasing = (qualities & ColumnIncreasing);
Chris@629 241 bool large = (qualities & ColumnLarge);
Chris@629 242
Chris@629 243 bool timingColumn = (numeric && increasing);
Chris@629 244
Chris@629 245 if (timingColumn) {
Chris@629 246
Chris@629 247 ++timingColumnCount;
Chris@629 248
Chris@629 249 if (primary) {
Chris@629 250
Chris@629 251 purpose = ColumnStartTime;
Chris@629 252
Chris@629 253 m_timingType = ExplicitTiming;
Chris@629 254
Chris@629 255 if (integral && large) {
Chris@629 256 m_timeUnits = TimeAudioFrames;
Chris@629 257 } else {
Chris@629 258 m_timeUnits = TimeSeconds;
Chris@629 259 }
Chris@629 260
Chris@629 261 } else {
Chris@629 262
Chris@629 263 if (timingColumnCount == 2 && m_timingType == ExplicitTiming) {
Chris@629 264 purpose = ColumnEndTime;
Chris@629 265 }
Chris@629 266 }
Chris@629 267 }
Chris@629 268
Chris@629 269 if (purpose == ColumnUnknown) {
Chris@629 270 if (numeric) {
Chris@629 271 purpose = ColumnValue;
Chris@629 272 } else {
Chris@629 273 purpose = ColumnLabel;
Chris@629 274 }
Chris@629 275 }
Chris@629 276
Chris@631 277 setColumnPurpose(i, purpose);
Chris@629 278 }
Chris@629 279
Chris@629 280 int valueCount = 0;
Chris@629 281 for (int i = 0; i < m_columnCount; ++i) {
Chris@629 282 if (m_columnPurposes[i] == ColumnValue) ++valueCount;
Chris@629 283 }
Chris@629 284
Chris@630 285 if (valueCount == 2 && timingColumnCount == 1) {
Chris@630 286 // If we have exactly two apparent value columns and only one
Chris@630 287 // timing column, but one value column is integral and the
Chris@630 288 // other is not, guess that whichever one matches the integral
Chris@630 289 // status of the time column is either duration or end time
Chris@630 290 if (m_timingType == ExplicitTiming) {
Chris@630 291 int a = -1, b = -1;
Chris@630 292 for (int i = 0; i < m_columnCount; ++i) {
Chris@630 293 if (m_columnPurposes[i] == ColumnValue) {
Chris@630 294 if (a == -1) a = i;
Chris@630 295 else b = i;
Chris@630 296 }
Chris@630 297 }
Chris@630 298 if ((m_columnQualities[a] & ColumnIntegral) !=
Chris@630 299 (m_columnQualities[b] & ColumnIntegral)) {
Chris@630 300 int timecol = a;
Chris@630 301 if ((m_columnQualities[a] & ColumnIntegral) !=
Chris@630 302 (m_columnQualities[0] & ColumnIntegral)) {
Chris@630 303 timecol = b;
Chris@630 304 }
Chris@630 305 if (m_columnQualities[timecol] & ColumnIncreasing) {
Chris@630 306 // This shouldn't happen; should have been settled above
Chris@630 307 m_columnPurposes[timecol] = ColumnEndTime;
Chris@630 308 } else {
Chris@630 309 m_columnPurposes[timecol] = ColumnDuration;
Chris@630 310 }
Chris@630 311 --valueCount;
Chris@630 312 }
Chris@630 313 }
Chris@630 314 }
Chris@630 315
Chris@631 316 if (timingColumnCount > 1) {
Chris@631 317 m_modelType = TwoDimensionalModelWithDuration;
Chris@392 318 } else {
Chris@631 319 if (valueCount == 0) {
Chris@631 320 m_modelType = OneDimensionalModel;
Chris@631 321 } else if (valueCount == 1) {
Chris@631 322 m_modelType = TwoDimensionalModel;
Chris@631 323 } else {
Chris@631 324 m_modelType = ThreeDimensionalModel;
Chris@631 325 }
Chris@629 326 }
Chris@392 327
Chris@1362 328 SVDEBUG << "Estimated column purposes: ";
Chris@1362 329 for (int i = 0; i < m_columnCount; ++i) {
Chris@1362 330 SVDEBUG << int(m_columnPurposes[i]) << " ";
Chris@1362 331 }
Chris@1362 332 SVDEBUG << endl;
Chris@392 333
Chris@1362 334 SVDEBUG << "Estimated model type: " << m_modelType << endl;
Chris@1362 335 SVDEBUG << "Estimated timing type: " << m_timingType << endl;
Chris@1362 336 SVDEBUG << "Estimated units: " << m_timeUnits << endl;
Chris@392 337 }
Chris@392 338
Chris@631 339 CSVFormat::ColumnPurpose
Chris@631 340 CSVFormat::getColumnPurpose(int i)
Chris@631 341 {
Chris@631 342 while (m_columnPurposes.size() <= i) {
Chris@631 343 m_columnPurposes.push_back(ColumnUnknown);
Chris@631 344 }
Chris@631 345 return m_columnPurposes[i];
Chris@631 346 }
Chris@629 347
Chris@631 348 CSVFormat::ColumnPurpose
Chris@631 349 CSVFormat::getColumnPurpose(int i) const
Chris@631 350 {
Chris@668 351 if (m_columnPurposes.size() <= i) {
Chris@668 352 return ColumnUnknown;
Chris@668 353 }
Chris@631 354 return m_columnPurposes[i];
Chris@631 355 }
Chris@631 356
Chris@631 357 void
Chris@631 358 CSVFormat::setColumnPurpose(int i, ColumnPurpose p)
Chris@631 359 {
Chris@631 360 while (m_columnPurposes.size() <= i) {
Chris@631 361 m_columnPurposes.push_back(ColumnUnknown);
Chris@631 362 }
Chris@631 363 m_columnPurposes[i] = p;
Chris@631 364 }
Chris@631 365
Chris@631 366
Chris@631 367
Chris@631 368