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author | Chris Cannam <cannam@all-day-breakfast.com> |
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date | Mon, 02 Mar 2020 14:03:47 +0000 |
parents | bd3cc4d1df30 |
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<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd"> <html> <!-- This manual is for FFTW (version 3.3.8, 24 May 2018). Copyright (C) 2003 Matteo Frigo. Copyright (C) 2003 Massachusetts Institute of Technology. Permission is granted to make and distribute verbatim copies of this manual provided the copyright notice and this permission notice are preserved on all copies. Permission is granted to copy and distribute modified versions of this manual under the conditions for verbatim copying, provided that the entire resulting derived work is distributed under the terms of a permission notice identical to this one. Permission is granted to copy and distribute translations of this manual into another language, under the above conditions for modified versions, except that this permission notice may be stated in a translation approved by the Free Software Foundation. --> <!-- Created by GNU Texinfo 6.3, http://www.gnu.org/software/texinfo/ --> <head> <title>FFTW 3.3.8: Basic distributed-transpose interface</title> <meta name="description" content="FFTW 3.3.8: Basic distributed-transpose interface"> <meta name="keywords" content="FFTW 3.3.8: Basic distributed-transpose interface"> <meta name="resource-type" content="document"> <meta name="distribution" content="global"> <meta name="Generator" content="makeinfo"> <meta http-equiv="Content-Type" content="text/html; charset=utf-8"> <link href="index.html#Top" rel="start" title="Top"> <link href="Concept-Index.html#Concept-Index" rel="index" title="Concept Index"> <link href="index.html#SEC_Contents" rel="contents" title="Table of Contents"> <link href="FFTW-MPI-Transposes.html#FFTW-MPI-Transposes" rel="up" title="FFTW MPI Transposes"> <link href="Advanced-distributed_002dtranspose-interface.html#Advanced-distributed_002dtranspose-interface" rel="next" title="Advanced distributed-transpose interface"> <link href="FFTW-MPI-Transposes.html#FFTW-MPI-Transposes" rel="prev" title="FFTW MPI Transposes"> <style type="text/css"> <!-- a.summary-letter {text-decoration: none} blockquote.indentedblock {margin-right: 0em} blockquote.smallindentedblock {margin-right: 0em; font-size: smaller} blockquote.smallquotation {font-size: smaller} div.display {margin-left: 3.2em} div.example {margin-left: 3.2em} div.lisp {margin-left: 3.2em} div.smalldisplay {margin-left: 3.2em} div.smallexample {margin-left: 3.2em} div.smalllisp {margin-left: 3.2em} kbd {font-style: oblique} pre.display {font-family: inherit} pre.format {font-family: inherit} pre.menu-comment {font-family: serif} pre.menu-preformatted {font-family: serif} pre.smalldisplay {font-family: inherit; font-size: smaller} pre.smallexample {font-size: smaller} pre.smallformat {font-family: inherit; font-size: smaller} pre.smalllisp {font-size: smaller} span.nolinebreak {white-space: nowrap} span.roman {font-family: initial; font-weight: normal} span.sansserif {font-family: sans-serif; font-weight: normal} ul.no-bullet {list-style: none} --> </style> </head> <body lang="en"> <a name="Basic-distributed_002dtranspose-interface"></a> <div class="header"> <p> Next: <a href="Advanced-distributed_002dtranspose-interface.html#Advanced-distributed_002dtranspose-interface" accesskey="n" rel="next">Advanced distributed-transpose interface</a>, Previous: <a href="FFTW-MPI-Transposes.html#FFTW-MPI-Transposes" accesskey="p" rel="prev">FFTW MPI Transposes</a>, Up: <a href="FFTW-MPI-Transposes.html#FFTW-MPI-Transposes" accesskey="u" rel="up">FFTW MPI Transposes</a> [<a href="index.html#SEC_Contents" title="Table of contents" rel="contents">Contents</a>][<a href="Concept-Index.html#Concept-Index" title="Index" rel="index">Index</a>]</p> </div> <hr> <a name="Basic-distributed_002dtranspose-interface-1"></a> <h4 class="subsection">6.7.1 Basic distributed-transpose interface</h4> <p>In particular, suppose that we have an <code>n0</code> by <code>n1</code> array in row-major order, block-distributed across the <code>n0</code> dimension. To transpose this into an <code>n1</code> by <code>n0</code> array block-distributed across the <code>n1</code> dimension, we would create a plan by calling the following function: </p> <div class="example"> <pre class="example">fftw_plan fftw_mpi_plan_transpose(ptrdiff_t n0, ptrdiff_t n1, double *in, double *out, MPI_Comm comm, unsigned flags); </pre></div> <a name="index-fftw_005fmpi_005fplan_005ftranspose"></a> <p>The input and output arrays (<code>in</code> and <code>out</code>) can be the same. The transpose is actually executed by calling <code>fftw_execute</code> on the plan, as usual. <a name="index-fftw_005fexecute-3"></a> </p> <p>The <code>flags</code> are the usual FFTW planner flags, but support two additional flags: <code>FFTW_MPI_TRANSPOSED_OUT</code> and/or <code>FFTW_MPI_TRANSPOSED_IN</code>. What these flags indicate, for transpose plans, is that the output and/or input, respectively, are <em>locally</em> transposed. That is, on each process input data is normally stored as a <code>local_n0</code> by <code>n1</code> array in row-major order, but for an <code>FFTW_MPI_TRANSPOSED_IN</code> plan the input data is stored as <code>n1</code> by <code>local_n0</code> in row-major order. Similarly, <code>FFTW_MPI_TRANSPOSED_OUT</code> means that the output is <code>n0</code> by <code>local_n1</code> instead of <code>local_n1</code> by <code>n0</code>. <a name="index-FFTW_005fMPI_005fTRANSPOSED_005fOUT-1"></a> <a name="index-FFTW_005fMPI_005fTRANSPOSED_005fIN-1"></a> </p> <p>To determine the local size of the array on each process before and after the transpose, as well as the amount of storage that must be allocated, one should call <code>fftw_mpi_local_size_2d_transposed</code>, just as for a 2d DFT as described in the previous section: <a name="index-data-distribution-4"></a> </p> <div class="example"> <pre class="example">ptrdiff_t fftw_mpi_local_size_2d_transposed (ptrdiff_t n0, ptrdiff_t n1, MPI_Comm comm, ptrdiff_t *local_n0, ptrdiff_t *local_0_start, ptrdiff_t *local_n1, ptrdiff_t *local_1_start); </pre></div> <a name="index-fftw_005fmpi_005flocal_005fsize_005f2d_005ftransposed"></a> <p>Again, the return value is the local storage to allocate, which in this case is the number of <em>real</em> (<code>double</code>) values rather than complex numbers as in the previous examples. </p> <hr> <div class="header"> <p> Next: <a href="Advanced-distributed_002dtranspose-interface.html#Advanced-distributed_002dtranspose-interface" accesskey="n" rel="next">Advanced distributed-transpose interface</a>, Previous: <a href="FFTW-MPI-Transposes.html#FFTW-MPI-Transposes" accesskey="p" rel="prev">FFTW MPI Transposes</a>, Up: <a href="FFTW-MPI-Transposes.html#FFTW-MPI-Transposes" accesskey="u" rel="up">FFTW MPI Transposes</a> [<a href="index.html#SEC_Contents" title="Table of contents" rel="contents">Contents</a>][<a href="Concept-Index.html#Concept-Index" title="Index" rel="index">Index</a>]</p> </div> </body> </html>