annotate src/fftw-3.3.3/doc/FAQ/fftw-faq.bfnn @ 23:619f715526df sv_v2.1

Update Vamp plugin SDK to 2.5
author Chris Cannam
date Thu, 09 May 2013 10:52:46 +0100
parents 37bf6b4a2645
children
rev   line source
Chris@10 1 \comment This is the source for the FFTW FAQ list, in
Chris@10 2 \comment the Bizarre Format With No Name. It is turned into Lout
Chris@10 3 \comment input, HTML, plain ASCII and an Info document by a Perl script.
Chris@10 4 \comment
Chris@10 5 \comment The format and scripts come from the Linux FAQ, by
Chris@10 6 \comment Ian Jackson.
Chris@10 7 \set brieftitle FFTW FAQ
Chris@10 8 \set author <A href="http://www.fftw.org">Matteo Frigo and Steven G. Johnson</A> / <A href="mailto:fftw@fftw.org">fftw@fftw.org</A>
Chris@10 9 \set authormail fftw@fftw.org
Chris@10 10 \set title FFTW Frequently Asked Questions with Answers
Chris@10 11 \set copyholder Matteo Frigo and Massachusetts Institute of Technology
Chris@10 12 \call-html startup html.refs2
Chris@10 13 \copyto ASCII
Chris@10 14 FFTW FREQUENTLY ASKED QUESTIONS WITH ANSWERS
Chris@10 15 `date '+%d %h %Y'`
Chris@10 16 Matteo Frigo
Chris@10 17 Steven G. Johnson
Chris@10 18 <fftw@fftw.org>
Chris@10 19
Chris@10 20 \endcopy
Chris@10 21 \copyto INFO
Chris@10 22 START-INFO-DIR-ENTRY
Chris@10 23 * FFTW FAQ: (fftw-faq). FFTW Frequently Asked Questions with Answers.
Chris@10 24 END-INFO-DIR-ENTRY
Chris@10 25
Chris@10 26 
Chris@10 27 File: $prefix.info, Node: Top, Next: Question 1.1, Up: (dir)
Chris@10 28
Chris@10 29 FFTW FREQUENTLY ASKED QUESTIONS WITH ANSWERS
Chris@10 30 `date '+%d %h %Y'`
Chris@10 31 Matteo Frigo
Chris@10 32 Steven G. Johnson
Chris@10 33 <fftw@fftw.org>
Chris@10 34
Chris@10 35 \endcopy
Chris@10 36
Chris@10 37 This is the list of Frequently Asked Questions about FFTW, a
Chris@10 38 collection of fast C routines for computing the Discrete Fourier
Chris@10 39 Transform in one or more dimensions.
Chris@10 40
Chris@10 41 \section Index
Chris@10 42
Chris@10 43 \index
Chris@10 44
Chris@10 45 \comment ######################################################################
Chris@10 46
Chris@10 47 \section Introduction and General Information
Chris@10 48
Chris@10 49 \question 26aug:whatisfftw What is FFTW?
Chris@10 50
Chris@10 51 FFTW is a free collection of fast C routines for computing the
Chris@10 52 Discrete Fourier Transform in one or more dimensions. It includes
Chris@10 53 complex, real, symmetric, and parallel transforms, and can handle
Chris@10 54 arbitrary array sizes efficiently. FFTW is typically faster than
Chris@10 55 other publically-available FFT implementations, and is even
Chris@10 56 competitive with vendor-tuned libraries. (See our web page for
Chris@10 57 extensive benchmarks.) To achieve this performance, FFTW uses novel
Chris@10 58 code-generation and runtime self-optimization techniques (along with
Chris@10 59 many other tricks).
Chris@10 60
Chris@10 61 \question 26aug:whereisfftw How do I obtain FFTW?
Chris@10 62
Chris@10 63 FFTW can be found at \docref{the FFTW web page\}. You can also
Chris@10 64 retrieve it from \ftpon ftp.fftw.org in \ftpin /pub/fftw.
Chris@10 65
Chris@10 66 \question 26aug:isfftwfree Is FFTW free software?
Chris@10 67
Chris@10 68 Starting with version 1.3, FFTW is Free Software in the technical
Chris@10 69 sense defined by the Free Software Foundation (see \docref{Categories
Chris@10 70 of Free and Non-Free Software\}), and is distributed under the terms
Chris@10 71 of the GNU General Public License. Previous versions of FFTW were
Chris@10 72 distributed without fee for noncommercial use, but were not
Chris@10 73 technically ``free.''
Chris@10 74
Chris@10 75 Non-free licenses for FFTW are also available that permit different
Chris@10 76 terms of use than the GPL.
Chris@10 77
Chris@10 78 \question 10apr:nonfree What is this about non-free licenses?
Chris@10 79
Chris@10 80 The non-free licenses are for companies that wish to use FFTW in their
Chris@10 81 products but are unwilling to release their software under the GPL
Chris@10 82 (which would require them to release source code and allow free
Chris@10 83 redistribution). Such users can purchase an unlimited-use license
Chris@10 84 from MIT. Contact us for more details.
Chris@10 85
Chris@10 86 We could instead have released FFTW under the LGPL, or even disallowed
Chris@10 87 non-Free usage. Suffice it to say, however, that MIT owns the
Chris@10 88 copyright to FFTW and they only let us GPL it because we convinced
Chris@10 89 them that it would neither affect their licensing revenue nor irritate
Chris@10 90 existing licensees.
Chris@10 91
Chris@10 92 \question 24oct:west In the West? I thought MIT was in the East?
Chris@10 93
Chris@10 94 Not to an Italian. You could say that we're a Spaghetti Western
Chris@10 95 (with apologies to Sergio Leone).
Chris@10 96
Chris@10 97 \comment ######################################################################
Chris@10 98
Chris@10 99 \section Installing FFTW
Chris@10 100
Chris@10 101 \question 26aug:systems Which systems does FFTW run on?
Chris@10 102
Chris@10 103 FFTW is written in ANSI C, and should work on any system with a decent
Chris@10 104 C compiler. (See also \qref runOnWindows, \qref compilerCrashes.)
Chris@10 105 FFTW can also take advantage of certain hardware-specific features,
Chris@10 106 such as cycle counters and SIMD instructions, but this is optional.
Chris@10 107
Chris@10 108 \question 26aug:runOnWindows Does FFTW run on Windows?
Chris@10 109
Chris@10 110 Yes, many people have reported successfully using FFTW on Windows with
Chris@10 111 various compilers. FFTW was not developed on Windows, but the source
Chris@10 112 code is essentially straight ANSI C. See also the \docref{FFTW
Chris@10 113 Windows installation notes\}, \qref compilerCrashes, and \qref
Chris@10 114 vbetalia.
Chris@10 115
Chris@10 116 \question 26aug:compilerCrashes My compiler has trouble with FFTW.
Chris@10 117
Chris@10 118 Complain fiercely to the vendor of the compiler.
Chris@10 119
Chris@10 120 We have successfully used \courier{gcc\} 3.2.x on x86 and PPC, a
Chris@10 121 recent Compaq C compiler for Alpha, version 6 of IBM's \courier{xlc\}
Chris@10 122 compiler for AIX, Intel's \courier{icc\} versions 5-7, and Sun
Chris@10 123 WorkShop \courier{cc\} version 6.
Chris@10 124
Chris@10 125 FFTW is likely to push compilers to their limits, however, and several
Chris@10 126 compiler bugs have been exposed by FFTW. A partial list follows.
Chris@10 127
Chris@10 128 \courier{gcc\} 2.95.x for Solaris/SPARC produces incorrect code for
Chris@10 129 the test program (workaround: recompile the \courier{libbench2\}
Chris@10 130 directory with \courier{-O2\}).
Chris@10 131
Chris@10 132 NetBSD/macppc 1.6 comes with a \courier{gcc\} version that also
Chris@10 133 miscompiles the test program. (Please report a workaround if you know
Chris@10 134 one.)
Chris@10 135
Chris@10 136 \courier{gcc\} 3.2.3 for ARM reportedly crashes during compilation.
Chris@10 137 This bug is reportedly fixed in later versions of \courier{gcc\}.
Chris@10 138
Chris@10 139 Versions 8.0 and 8.1 of Intel's \courier{icc\} falsely claim to be
Chris@10 140 \courier{gcc\}, so you should specify \courier{CC="icc -no-gcc"\};
Chris@10 141 this is automatic in FFTW 3.1. \courier{icc-8.0.066\} reportely
Chris@10 142 produces incorrect code for FFTW 2.1.5, but is fixed in version 8.1.
Chris@10 143 \courier{icc-7.1\} compiler build 20030402Z appears to produce
Chris@10 144 incorrect dependencies, causing the compilation to fail.
Chris@10 145 \courier{icc-7.1\} build 20030307Z appears to work fine. (Use
Chris@10 146 \courier{icc -V\} to check which build you have.) As of 2003/04/18,
Chris@10 147 build 20030402Z appears not to be available any longer on Intel's
Chris@10 148 website, whereas the older build 20030307Z is available.
Chris@10 149
Chris@10 150 \courier{ranlib\} of GNU \courier{binutils\} 2.9.1 on Irix has been
Chris@10 151 observed to corrupt the FFTW libraries, causing a link failure when
Chris@10 152 FFTW is compiled. Since \courier{ranlib\} is completely superfluous
Chris@10 153 on Irix, we suggest deleting it from your system and replacing it with
Chris@10 154 a symbolic link to \courier{/bin/echo\}.
Chris@10 155
Chris@10 156 If support for SIMD instructions is enabled in FFTW, further compiler
Chris@10 157 problems may appear:
Chris@10 158
Chris@10 159 \courier{gcc\} 3.4.[0123] for x86 produces incorrect SSE2 code for
Chris@10 160 FFTW when \courier{-O2\} (the best choice for FFTW) is used, causing
Chris@10 161 FFTW to crash (\courier{make check\} crashes). This bug is fixed in
Chris@10 162 \courier{gcc\} 3.4.4. On x86_64 (amd64/em64t), \courier{gcc\} 3.4.4
Chris@10 163 reportedly still has a similar problem, but this is fixed as of
Chris@10 164 \courier{gcc\} 3.4.6.
Chris@10 165
Chris@10 166 \courier{gcc-3.2\} for x86 produces incorrect SIMD code if
Chris@10 167 \courier{-O3\} is used. The same compiler produces incorrect SIMD
Chris@10 168 code if no optimization is used, too. When using \courier{gcc-3.2\},
Chris@10 169 it is a good idea not to change the default \courier{CFLAGS\} selected
Chris@10 170 by the \courier{configure\} script.
Chris@10 171
Chris@10 172 Some 3.0.x and 3.1.x versions of \courier{gcc\} on \courier{x86\} may
Chris@10 173 crash. \courier{gcc\} so-called 2.96 shipping with RedHat 7.3 crashes
Chris@10 174 when compiling SIMD code. In both cases, please upgrade to
Chris@10 175 \courier{gcc-3.2\} or later.
Chris@10 176
Chris@10 177 Intel's \courier{icc\} 6.0 misaligns SSE constants, but FFTW has a
Chris@10 178 workaround. \courier{icc\} 8.x fails to compile FFTW 3.0.x because it
Chris@10 179 falsely claims to be \courier{gcc\}; we believe this to be a bug in
Chris@10 180 \courier{icc\}, but FFTW 3.1 has a workaround.
Chris@10 181
Chris@10 182 Visual C++ 2003 reportedly produces incorrect code for SSE/SSE2 when
Chris@10 183 compiling FFTW. This bug was reportedly fixed in VC++ 2005;
Chris@10 184 alternatively, you could switch to the Intel compiler. VC++ 6.0 also
Chris@10 185 reportedly produces incorrect code for the file
Chris@10 186 \courier{reodft11e-r2hc-odd.c\} unless optimizations are disabled for
Chris@10 187 that file.
Chris@10 188
Chris@10 189 \courier{gcc\} 2.95 on MacOS X miscompiles AltiVec code (fixed in
Chris@10 190 later versions). \courier{gcc\} 3.2.x miscompiles AltiVec
Chris@10 191 permutations, but FFTW has a workaround. \courier{gcc\} 4.0.1 on
Chris@10 192 MacOS for Intel crashes when compiling FFTW; a workaround is to
Chris@10 193 compile one file without optimization: \courier{cd kernel; make
Chris@10 194 CFLAGS=" " trig.lo\}.
Chris@10 195
Chris@10 196 \courier{gcc\} 4.1.1 reportedly crashes when compiling FFTW for MIPS;
Chris@10 197 the workaround is to compile the file it crashes on
Chris@10 198 (\courier{t2_64.c\}) with a lower optimization level.
Chris@10 199
Chris@10 200 \courier{gcc\} versions 4.1.2 to 4.2.0 for x86 reportedly miscompile
Chris@10 201 FFTW 3.1's test program, causing \courier{make check\} to crash
Chris@10 202 (\courier{gcc\} bug #26528). The bug was reportedly fixed in
Chris@10 203 \courier{gcc\} version 4.2.1 and later. A workaround is to compile
Chris@10 204 \courier{libbench2/verify-lib.c\} without optimization.
Chris@10 205
Chris@10 206 \question 26aug:solarisSucks FFTW does not compile on Solaris, complaining about \courier{const\}.
Chris@10 207
Chris@10 208 We know that at least on Solaris 2.5.x with Sun's compilers 4.2 you
Chris@10 209 might get error messages from \courier{make\} such as
Chris@10 210
Chris@10 211 \courier{"./fftw.h", line 88: warning: const is a keyword in ANSI C\}
Chris@10 212
Chris@10 213 This is the case when the \courier{configure\} script reports that
Chris@10 214 \courier{const\} does not work:
Chris@10 215
Chris@10 216 \courier{checking for working const... (cached) no\}
Chris@10 217
Chris@10 218 You should be aware that Solaris comes with two compilers, namely,
Chris@10 219 \courier{/opt/SUNWspro/SC4.2/bin/cc\} and \courier{/usr/ucb/cc\}. The
Chris@10 220 latter compiler is non-ANSI. Indeed, it is a perverse shell script
Chris@10 221 that calls the real compiler in non-ANSI mode. In order
Chris@10 222 to compile FFTW, change your path so that the right \courier{cc\}
Chris@10 223 is used.
Chris@10 224
Chris@10 225 To know whether your compiler is the right one, type
Chris@10 226 \courier{cc -V\}. If the compiler prints ``\courier{ucbcc\}'',
Chris@10 227 as in
Chris@10 228
Chris@10 229 \courier{ucbcc: WorkShop Compilers 4.2 30 Oct 1996 C 4.2\}
Chris@10 230
Chris@10 231 then the compiler is wrong. The right message is something like
Chris@10 232
Chris@10 233 \courier{cc: WorkShop Compilers 4.2 30 Oct 1996 C 4.2\}
Chris@10 234
Chris@10 235 \question 19mar:3dnow What's the difference between \courier{--enable-3dnow\} and \courier{--enable-k7\}?
Chris@10 236
Chris@10 237 \courier{--enable-k7\} enables 3DNow! instructions on K7 processors
Chris@10 238 (AMD Athlon and its variants). K7 support is provided by assembly
Chris@10 239 routines generated by a special purpose compiler.
Chris@10 240 As of fftw-3.2, --enable-k7 is no longer supported.
Chris@10 241
Chris@10 242 \courier{--enable-3dnow\} enables generic 3DNow! support using
Chris@10 243 \courier{gcc\} builtin functions. This works on earlier AMD
Chris@10 244 processors, but it is not as fast as our special assembly routines.
Chris@10 245 As of fftw-3.1, --enable-3dnow is no longer supported.
Chris@10 246
Chris@10 247 \question 18apr:fma What's the difference between the fma and the non-fma versions?
Chris@10 248
Chris@10 249 The fma version tries to exploit the fused multiply-add instructions
Chris@10 250 implemented in many processors such as PowerPC, ia-64, and MIPS. The
Chris@10 251 two FFTW packages are otherwise identical. In FFTW 3.1, the fma and
Chris@10 252 non-fma versions were merged together into a single package, and the
Chris@10 253 \courier{configure\} script attempts to automatically guess which
Chris@10 254 version to use.
Chris@10 255
Chris@10 256 The FFTW 3.1 \courier{configure\} script enables fma by default on
Chris@10 257 PowerPC, Itanium, and PA-RISC, and disables it otherwise. You can
Chris@10 258 force one or the other by using the \courier{--enable-fma\} or
Chris@10 259 \courier{--disable-fma\} flag for \courier{configure\}.
Chris@10 260
Chris@10 261 Definitely use fma if you have a PowerPC-based system with
Chris@10 262 \courier{gcc\} (or IBM \courier{xlc\}). This includes all GNU/Linux
Chris@10 263 systems for PowerPC and the older PowerPC-based MacOS systems. Also
Chris@10 264 use it on PA-RISC and Itanium with the HP/UX compiler.
Chris@10 265
Chris@10 266 Definitely do not use the fma version if you have an ia-32 processor
Chris@10 267 (Intel, AMD, MacOS on Intel, etcetera).
Chris@10 268
Chris@10 269 For other architectures/compilers, the situation is not so clear. For
Chris@10 270 example, ia-64 has the fma instruction, but \courier{gcc-3.2\} appears
Chris@10 271 not to exploit it correctly. Other compilers may do the right thing,
Chris@10 272 but we have not tried them. Please send us your feedback so that we
Chris@10 273 can update this FAQ entry.
Chris@10 274
Chris@10 275 \question 26aug:languages Which language is FFTW written in?
Chris@10 276
Chris@10 277 FFTW is written in ANSI C. Most of the code, however, was
Chris@10 278 automatically generated by a program called \courier{genfft\}, written
Chris@10 279 in the Objective Caml dialect of ML. You do not need to know ML or to
Chris@10 280 have an Objective Caml compiler in order to use FFTW.
Chris@10 281
Chris@10 282 \courier{genfft\} is provided with the FFTW sources, which means that
Chris@10 283 you can play with the code generator if you want. In this case, you
Chris@10 284 need a working Objective Caml system. Objective Caml is available
Chris@10 285 from \docref{the Caml web page\}.
Chris@10 286
Chris@10 287 \question 26aug:fortran Can I call FFTW from Fortran?
Chris@10 288
Chris@10 289 Yes, FFTW (versions 1.3 and higher) contains a Fortran-callable
Chris@10 290 interface, documented in the FFTW manual.
Chris@10 291
Chris@10 292 By default, FFTW configures its Fortran interface to work with the
Chris@10 293 first compiler it finds, e.g. \courier{g77\}. To configure for a
Chris@10 294 different, incompatible Fortran compiler \courier{foobar\}, use
Chris@10 295 \courier{./configure F77=foobar\} when installing FFTW. (In the case
Chris@10 296 of \courier{g77\}, however, FFTW 3.x also includes an extra set of
Chris@10 297 Fortran-callable routines with one less underscore at the end of
Chris@10 298 identifiers, which should cover most other Fortran compilers on Linux
Chris@10 299 at least.)
Chris@10 300
Chris@10 301 \question 26aug:cplusplus Can I call FFTW from C++?
Chris@10 302
Chris@10 303 Most definitely. FFTW should compile and/or link under any C++
Chris@10 304 compiler. Moreover, it is likely that the C++ \courier{<complex>\}
Chris@10 305 template class is bit-compatible with FFTW's complex-number format
Chris@10 306 (see the FFTW manual for more details).
Chris@10 307
Chris@10 308 \question 26aug:whynotfortran Why isn't FFTW written in Fortran/C++?
Chris@10 309
Chris@10 310 Because we don't like those languages, and neither approaches the
Chris@10 311 portability of C.
Chris@10 312
Chris@10 313 \question 29mar:singleprec How do I compile FFTW to run in single precision?
Chris@10 314
Chris@10 315 On a Unix system: \courier{configure --enable-float\}. On a non-Unix
Chris@10 316 system: edit \courier{config.h\} to \courier{#define\} the symbol
Chris@10 317 \courier{FFTW_SINGLE\} (for FFTW 3.x). In both cases, you must then
Chris@10 318 recompile FFTW. In FFTW 3, all FFTW identifiers will then begin with
Chris@10 319 \courier{fftwf_\} instead of \courier{fftw_\}.
Chris@10 320
Chris@10 321 \question 28mar:64bitk7 --enable-k7 does not work on x86-64
Chris@10 322
Chris@10 323 Support for --enable-k7 was discontinued in fftw-3.2.
Chris@10 324
Chris@10 325 The fftw-3.1 release supports --enable-k7. This option only works on
Chris@10 326 32-bit x86 machines that implement 3DNow!, including the AMD Athlon
Chris@10 327 and the AMD Opteron in 32-bit mode. --enable-k7 does not work on AMD
Chris@10 328 Opteron in 64-bit mode. Use --enable-sse for x86-64 machines.
Chris@10 329
Chris@10 330 FFTW supports 3DNow! by means of assembly code generated by a
Chris@10 331 special-purpose compiler. It is hard to produce assembly code that
Chris@10 332 works in both 32-bit and 64-bit mode.
Chris@10 333
Chris@10 334 \comment ######################################################################
Chris@10 335
Chris@10 336 \section Using FFTW
Chris@10 337
Chris@10 338 \question 15mar:fftw2to3 Why not support the FFTW 2 interface in FFTW 3?
Chris@10 339
Chris@10 340 FFTW 3 has semantics incompatible with earlier versions: its plans can
Chris@10 341 only be used for a given stride, multiplicity, and other
Chris@10 342 characteristics of the input and output arrays; these stronger
Chris@10 343 semantics are necessary for performance reasons. Thus, it is
Chris@10 344 impossible to efficiently emulate the older interface (whose plans can
Chris@10 345 be used for any transform of the same size). We believe that it
Chris@10 346 should be possible to upgrade most programs without any difficulty,
Chris@10 347 however.
Chris@10 348
Chris@10 349 \question 20mar:planperarray Why do FFTW 3 plans encapsulate the input/output arrays and not just the algorithm?
Chris@10 350
Chris@10 351 There are several reasons:
Chris@10 352
Chris@10 353 \call startlist
Chris@10 354 \call item
Chris@10 355 It was important for performance reasons that the plan be specific to
Chris@10 356 array characteristics like the stride (and alignment, for SIMD), and
Chris@10 357 requiring that the user maintain these invariants is error prone.
Chris@10 358 \call item
Chris@10 359 In most high-performance applications, as far as we can tell, you are
Chris@10 360 usually transforming the same array over and over, so FFTW's semantics
Chris@10 361 should not be a burden.
Chris@10 362 \call item
Chris@10 363 If you need to transform another array of the same size, creating a
Chris@10 364 new plan once the first exists is a cheap operation.
Chris@10 365 \call item
Chris@10 366 If you need to transform many arrays of the same size at once, you
Chris@10 367 should really use the \courier{plan_many\} routines in FFTW's "advanced"
Chris@10 368 interface.
Chris@10 369 \call item
Chris@10 370 If the abovementioned array characteristics are the same, you are
Chris@10 371 willing to pay close attention to the documentation, and you really
Chris@10 372 need to, we provide a "new-array execution" interface to apply a plan
Chris@10 373 to a new array.
Chris@10 374 \call endlist
Chris@10 375
Chris@10 376 \question 25may:slow FFTW seems really slow.
Chris@10 377
Chris@10 378 You are probably recreating the plan before every transform, rather
Chris@10 379 than creating it once and reusing it for all transforms of the same
Chris@10 380 size. FFTW is designed to be used in the following way:
Chris@10 381
Chris@10 382 \call startlist
Chris@10 383 \call item
Chris@10 384 First, you create a plan. This will take several seconds.
Chris@10 385 \call item
Chris@10 386 Then, you reuse the plan many times to perform FFTs. These are fast.
Chris@10 387 \call endlist
Chris@10 388
Chris@10 389 If you don't need to compute many transforms and the time for the
Chris@10 390 planner is significant, you have two options. First, you can use the
Chris@10 391 \courier{FFTW_ESTIMATE\} option in the planner, which uses heuristics
Chris@10 392 instead of runtime measurements and produces a good plan in a short
Chris@10 393 time. Second, you can use the wisdom feature to precompute the plan;
Chris@10 394 see \qref savePlans
Chris@10 395
Chris@10 396 \question 22oct:slows FFTW slows down after repeated calls.
Chris@10 397
Chris@10 398 Probably, NaNs or similar are creeping into your data, and the
Chris@10 399 slowdown is due to the resulting floating-point exceptions. For
Chris@10 400 example, be aware that repeatedly FFTing the same array is a diverging
Chris@10 401 process (because FFTW computes the unnormalized transform).
Chris@10 402
Chris@10 403 \question 22oct:segfault An FFTW routine is crashing when I call it.
Chris@10 404
Chris@10 405 Did the FFTW test programs pass (\courier{make check\}, or \courier{cd
Chris@10 406 tests; make bigcheck\} if you want to be paranoid)? If so, you almost
Chris@10 407 certainly have a bug in your own code. For example, you could be
Chris@10 408 passing invalid arguments (such as wrongly-sized arrays) to FFTW, or
Chris@10 409 you could simply have memory corruption elsewhere in your program that
Chris@10 410 causes random crashes later on. Please don't complain to us unless
Chris@10 411 you can come up with a minimal self-contained program (preferably
Chris@10 412 under 30 lines) that illustrates the problem.
Chris@10 413
Chris@10 414 \question 22oct:fortran64 My Fortran program crashes when calling FFTW.
Chris@10 415
Chris@10 416 As described in the manual, on 64-bit machines you must store the
Chris@10 417 plans in variables large enough to hold a pointer, for example
Chris@10 418 \courier{integer*8\}. We recommend using \courier{integer*8\} on
Chris@10 419 32-bit machines as well, to simplify porting.
Chris@10 420
Chris@10 421 \question 24mar:conventions FFTW gives results different from my old FFT.
Chris@10 422
Chris@10 423 People follow many different conventions for the DFT, and you should
Chris@10 424 be sure to know the ones that we use (described in the FFTW manual).
Chris@10 425 In particular, you should be aware that the
Chris@10 426 \courier{FFTW_FORWARD\}/\courier{FFTW_BACKWARD\} directions correspond
Chris@10 427 to signs of -1/+1 in the exponent of the DFT definition.
Chris@10 428 (\italic{Numerical Recipes\} uses the opposite convention.)
Chris@10 429
Chris@10 430 You should also know that we compute an unnormalized transform. In
Chris@10 431 contrast, Matlab is an example of program that computes a normalized
Chris@10 432 transform. See \qref whyscaled.
Chris@10 433
Chris@10 434 Finally, note that floating-point arithmetic is not exact, so
Chris@10 435 different FFT algorithms will give slightly different results (on the
Chris@10 436 order of the numerical accuracy; typically a fractional difference of
Chris@10 437 1e-15 or so in double precision).
Chris@10 438
Chris@10 439 \question 31aug:nondeterministic FFTW gives different results between runs
Chris@10 440
Chris@10 441 If you use \courier{FFTW_MEASURE\} or \courier{FFTW_PATIENT\} mode,
Chris@10 442 then the algorithm FFTW employs is not deterministic: it depends on
Chris@10 443 runtime performance measurements. This will cause the results to vary
Chris@10 444 slightly from run to run. However, the differences should be slight,
Chris@10 445 on the order of the floating-point precision, and therefore should
Chris@10 446 have no practical impact on most applications.
Chris@10 447
Chris@10 448 If you use saved plans (wisdom) or \courier{FFTW_ESTIMATE\} mode,
Chris@10 449 however, then the algorithm is deterministic and the results should be
Chris@10 450 identical between runs.
Chris@10 451
Chris@10 452 \question 26aug:savePlans Can I save FFTW's plans?
Chris@10 453
Chris@10 454 Yes. Starting with version 1.2, FFTW provides the \courier{wisdom\}
Chris@10 455 mechanism for saving plans; see the FFTW manual.
Chris@10 456
Chris@10 457 \question 14sep:whyscaled Why does your inverse transform return a scaled result?
Chris@10 458
Chris@10 459 Computing the forward transform followed by the backward transform (or
Chris@10 460 vice versa) yields the original array scaled by the size of the array.
Chris@10 461 (For multi-dimensional transforms, the size of the array is the
Chris@10 462 product of the dimensions.) We could, instead, have chosen a
Chris@10 463 normalization that would have returned the unscaled array. Or, to
Chris@10 464 accomodate the many conventions in this matter, the transform routines
Chris@10 465 could have accepted a "scale factor" parameter. We did not do this,
Chris@10 466 however, for two reasons. First, we didn't want to sacrifice
Chris@10 467 performance in the common case where the scale factor is 1. Second, in
Chris@10 468 real applications the FFT is followed or preceded by some computation
Chris@10 469 on the data, into which the scale factor can typically be absorbed at
Chris@10 470 little or no cost.
Chris@10 471
Chris@10 472 \question 02dec:centerorigin How can I make FFTW put the origin (zero frequency) at the center of its output?
Chris@10 473
Chris@10 474 For human viewing of a spectrum, it is often convenient to put the
Chris@10 475 origin in frequency space at the center of the output array, rather
Chris@10 476 than in the zero-th element (the default in FFTW). If all of the
Chris@10 477 dimensions of your array are even, you can accomplish this by simply
Chris@10 478 multiplying each element of the input array by (-1)^(i + j + ...),
Chris@10 479 where i, j, etcetera are the indices of the element. (This trick is a
Chris@10 480 general property of the DFT, and is not specific to FFTW.)
Chris@10 481
Chris@10 482 \question 08may:imageaudio How do I FFT an image/audio file in \italic{foobar\} format?
Chris@10 483
Chris@10 484 FFTW performs an FFT on an array of floating-point values. You can
Chris@10 485 certainly use it to compute the transform of an image or audio stream,
Chris@10 486 but you are responsible for figuring out your data format and
Chris@10 487 converting it to the form FFTW requires.
Chris@10 488
Chris@10 489 \question 09apr:linkfails My program does not link (on Unix).
Chris@10 490
Chris@10 491 The libraries must be listed in the correct order (\courier{-lfftw3
Chris@10 492 -lm\} for FFTW 3.x) and \italic{after\} your program sources/objects.
Chris@10 493 (The general rule is that if \italic{A\} uses \italic{B\}, then
Chris@10 494 \italic{A\} must be listed before \italic{B\} in the link command.).
Chris@10 495
Chris@10 496 \question 15mar:linkheader I included your header, but linking still fails.
Chris@10 497
Chris@10 498 You're a C++ programmer, aren't you? You have to compile the FFTW
Chris@10 499 library and link it into your program, not just \courier{#include
Chris@10 500 <fftw3.h>\}. (Yes, this is really a FAQ.)
Chris@10 501
Chris@10 502 \question 22oct:nostack My program crashes, complaining about stack space.
Chris@10 503
Chris@10 504 You cannot declare large arrays with automatic storage (e.g. via
Chris@10 505 \courier{fftw_complex array[N]\}); you should use
Chris@10 506 \courier{fftw_malloc\} (or equivalent) to allocate the arrays you want
Chris@10 507 to transform if they are larger than a few hundred elements.
Chris@10 508
Chris@10 509 \question 13may:leaks FFTW seems to have a memory leak.
Chris@10 510
Chris@10 511 After you create a plan, FFTW caches the information required to
Chris@10 512 quickly recreate the plan. (See \qref savePlans) It also maintains a
Chris@10 513 small amount of other persistent memory. You can deallocate all of
Chris@10 514 FFTW's internally allocated memory, if you wish, by calling
Chris@10 515 \courier{fftw_cleanup()\}, as documented in the manual.
Chris@10 516
Chris@10 517 \question 16may:allzero The output of FFTW's transform is all zeros.
Chris@10 518
Chris@10 519 You should initialize your input array \italic{after\} creating the
Chris@10 520 plan, unless you use \courier{FFTW_ESTIMATE\}: planning with
Chris@10 521 \courier{FFTW_MEASURE\} or \courier{FFTW_PATIENT\} overwrites the
Chris@10 522 input/output arrays, as described in the manual.
Chris@10 523
Chris@10 524 \question 05sep:vbetalia How do I call FFTW from the Microsoft language du jour?
Chris@10 525
Chris@10 526 Please \italic{do not\} ask us Windows-specific questions. We do not
Chris@10 527 use Windows. We know nothing about Visual Basic, Visual C++, or .NET.
Chris@10 528 Please find the appropriate Usenet discussion group and ask your
Chris@10 529 question there. See also \qref runOnWindows.
Chris@10 530
Chris@10 531 \question 15oct:pruned Can I compute only a subset of the DFT outputs?
Chris@10 532
Chris@10 533 In general, no, an FFT intrinsically computes all outputs from all
Chris@10 534 inputs. In principle, there is something called a \italic{pruned
Chris@10 535 FFT\} that can do what you want, but to compute K outputs out of N the
Chris@10 536 complexity is in general O(N log K) instead of O(N log N), thus saving
Chris@10 537 only a small additive factor in the log. (The same argument holds if
Chris@10 538 you instead have only K nonzero inputs.)
Chris@10 539
Chris@10 540 There are some specific cases in which you can get the O(N log K)
Chris@10 541 performance benefits easily, however, by combining a few ordinary
Chris@10 542 FFTs. In particular, the case where you want the first K outputs,
Chris@10 543 where K divides N, can be handled by performing N/K transforms of size
Chris@10 544 K and then summing the outputs multiplied by appropriate phase
Chris@10 545 factors. For more details, see \docref{pruned FFTs with FFTW\}.
Chris@10 546
Chris@10 547 There are also some algorithms that compute pruned transforms
Chris@10 548 \italic{approximately\}, but they are beyond the scope of this FAQ.
Chris@10 549
Chris@10 550 \question 21jan:transpose Can I use FFTW's routines for in-place and out-of-place matrix transposition?
Chris@10 551
Chris@10 552 You can use the FFTW guru interface to create a rank-0 transform of
Chris@10 553 vector rank 2 where the vector strides are transposed. (A rank-0
Chris@10 554 transform is equivalent to a 1D transform of size 1, which. just
Chris@10 555 copies the input into the output.) Specifying the same location for
Chris@10 556 the input and output makes the transpose in-place.
Chris@10 557
Chris@10 558 For double-valued data stored in row-major format, plan creation looks like
Chris@10 559 this:
Chris@10 560
Chris@10 561 \verbatim
Chris@10 562 fftw_plan plan_transpose(int rows, int cols, double *in, double *out)
Chris@10 563 {
Chris@10 564 const unsigned flags = FFTW_ESTIMATE; /* other flags are possible */
Chris@10 565 fftw_iodim howmany_dims[2];
Chris@10 566
Chris@10 567 howmany_dims[0].n = rows;
Chris@10 568 howmany_dims[0].is = cols;
Chris@10 569 howmany_dims[0].os = 1;
Chris@10 570
Chris@10 571 howmany_dims[1].n = cols;
Chris@10 572 howmany_dims[1].is = 1;
Chris@10 573 howmany_dims[1].os = rows;
Chris@10 574
Chris@10 575 return fftw_plan_guru_r2r(/*rank=*/ 0, /*dims=*/ NULL,
Chris@10 576 /*howmany_rank=*/ 2, howmany_dims,
Chris@10 577 in, out, /*kind=*/ NULL, flags);
Chris@10 578 }
Chris@10 579 \endverbatim
Chris@10 580
Chris@10 581 (This entry was written by Rhys Ulerich.)
Chris@10 582
Chris@10 583 \comment ######################################################################
Chris@10 584
Chris@10 585 \section Internals of FFTW
Chris@10 586
Chris@10 587 \question 26aug:howworks How does FFTW work?
Chris@10 588
Chris@10 589 The innovation (if it can be so called) in FFTW consists in having a
Chris@10 590 variety of composable \italic{solvers\}, representing different FFT
Chris@10 591 algorithms and implementation strategies, whose combination into a
Chris@10 592 particular \italic{plan\} for a given size can be determined at
Chris@10 593 runtime according to the characteristics of your machine/compiler.
Chris@10 594 This peculiar software architecture allows FFTW to adapt itself to
Chris@10 595 almost any machine.
Chris@10 596
Chris@10 597 For more details (albeit somewhat outdated), see the paper "FFTW: An
Chris@10 598 Adaptive Software Architecture for the FFT", by M. Frigo and
Chris@10 599 S. G. Johnson, \italic{Proc. ICASSP\} 3, 1381 (1998), also
Chris@10 600 available at \docref{the FFTW web page\}.
Chris@10 601
Chris@10 602 \question 26aug:whyfast Why is FFTW so fast?
Chris@10 603
Chris@10 604 This is a complex question, and there is no simple answer. In fact,
Chris@10 605 the authors do not fully know the answer, either. In addition to many
Chris@10 606 small performance hacks throughout FFTW, there are three general
Chris@10 607 reasons for FFTW's speed.
Chris@10 608
Chris@10 609 \call startlist
Chris@10 610 \call item
Chris@10 611 FFTW uses a variety of FFT algorithms and implementation styles
Chris@10 612 that can be arbitrarily composed to adapt itself to
Chris@10 613 a machine. See \qref howworks.
Chris@10 614 \call item
Chris@10 615 FFTW uses a code generator to produce highly-optimized
Chris@10 616 routines for computing small transforms.
Chris@10 617 \call item
Chris@10 618 FFTW uses explicit divide-and-conquer to take advantage
Chris@10 619 of the memory hierarchy.
Chris@10 620 \call endlist
Chris@10 621
Chris@10 622 For more details (albeit somewhat outdated), see the paper "FFTW: An
Chris@10 623 Adaptive Software Architecture for the FFT", by M. Frigo and
Chris@10 624 S. G. Johnson, \italic{Proc. ICASSP\} 3, 1381 (1998),
Chris@10 625 available along with other references at \docref{the FFTW web page\}.
Chris@10 626
Chris@10 627 \comment ######################################################################
Chris@10 628
Chris@10 629 \section Known bugs
Chris@10 630
Chris@10 631 \question 27aug:rfftwndbug FFTW 1.1 crashes in rfftwnd on Linux.
Chris@10 632
Chris@10 633 This bug was fixed in FFTW 1.2. There was a bug in \courier{rfftwnd\}
Chris@10 634 causing an incorrect amount of memory to be allocated. The bug showed
Chris@10 635 up in Linux with libc-5.3.12 (and nowhere else that we know of).
Chris@10 636
Chris@10 637 \question 15oct:fftwmpibug The MPI transforms in FFTW 1.2 give incorrect results/leak memory.
Chris@10 638
Chris@10 639 These bugs were corrected in FFTW 1.2.1. The MPI transforms (really,
Chris@10 640 just the transpose routines) in FFTW 1.2 had bugs that could cause
Chris@10 641 errors in some situations.
Chris@10 642
Chris@10 643 \question 05nov:testsingbug The test programs in FFTW 1.2.1 fail when I change FFTW to use single precision.
Chris@10 644
Chris@10 645 This bug was fixed in FFTW 1.3. (Older versions of FFTW did
Chris@10 646 work in single precision, but the test programs didn't--the error
Chris@10 647 tolerances in the tests were set for double precision.)
Chris@10 648
Chris@10 649 \question 24mar:teststoobig The test program in FFTW 1.2.1 fails for n > 46340.
Chris@10 650
Chris@10 651 This bug was fixed in FFTW 1.3. FFTW 1.2.1 produced the right answer,
Chris@10 652 but the test program was wrong. For large n, n*n in the naive
Chris@10 653 transform that we used for comparison overflows 32 bit integer
Chris@10 654 precision, breaking the test.
Chris@10 655
Chris@10 656 \question 24aug:linuxthreads The threaded code fails on Linux Redhat 5.0
Chris@10 657
Chris@10 658 We had problems with glibc-2.0.5. The code should work with
Chris@10 659 glibc-2.0.7.
Chris@10 660
Chris@10 661 \question 26sep:bigrfftwnd FFTW 2.0's rfftwnd fails for rank > 1 transforms with a final dimension >= 65536.
Chris@10 662
Chris@10 663 This bug was fixed in FFTW 2.0.1. (There was a 32-bit integer overflow due
Chris@10 664 to a poorly-parenthesized expression.)
Chris@10 665
Chris@10 666 \question 26mar:primebug FFTW 2.0's complex transforms give the wrong results with prime factors 17 to 97.
Chris@10 667
Chris@10 668 There was a bug in the complex transforms that could cause incorrect
Chris@10 669 results under (hopefully rare) circumstances for lengths with
Chris@10 670 intermediate-size prime factors (17-97). This bug was fixed in FFTW
Chris@10 671 2.1.1.
Chris@10 672
Chris@10 673 \question 05apr:mpichbug FFTW 2.1.1's MPI test programs crash with MPICH.
Chris@10 674
Chris@10 675 This bug was fixed in FFTW 2.1.2. The 2.1/2.1.1 MPI test programs crashed
Chris@10 676 when using the MPICH implementation of MPI with the \courier{ch_p4\}
Chris@10 677 device (TCP/IP); the transforms themselves worked fine.
Chris@10 678
Chris@10 679 \question 25may:aixthreadbug FFTW 2.1.2's multi-threaded transforms don't work on AIX.
Chris@10 680
Chris@10 681 This bug was fixed in FFTW 2.1.3. The multi-threaded transforms in
Chris@10 682 previous versions didn't work with AIX's \courier{pthreads\}
Chris@10 683 implementation, which idiosyncratically creates threads in detached
Chris@10 684 (non-joinable) mode by default.
Chris@10 685
Chris@10 686 \question 27sep:bigprimebug FFTW 2.1.2's complex transforms give incorrect results for large prime sizes.
Chris@10 687
Chris@10 688 This bug was fixed in FFTW 2.1.3. FFTW's complex-transform algorithm
Chris@10 689 for prime sizes (in versions 2.0 to 2.1.2) had an integer overflow
Chris@10 690 problem that caused incorrect results for many primes greater than
Chris@10 691 32768 (on 32-bit machines). (Sizes without large prime factors are
Chris@10 692 not affected.)
Chris@10 693
Chris@10 694 \question 25may:solaristhreadbug FFTW 2.1.3's multi-threaded transforms don't give any speedup on Solaris.
Chris@10 695
Chris@10 696 This bug was fixed in FFTW 2.1.4. (By default, Solaris creates
Chris@10 697 threads that do not parallelize over multiple processors, so one has
Chris@10 698 to request the proper behavior specifically.)
Chris@10 699
Chris@10 700 \question 03may:aixflags FFTW 2.1.3 crashes on AIX.
Chris@10 701
Chris@10 702 The FFTW 2.1.3 \courier{configure\} script picked incorrect compiler
Chris@10 703 flags for the \courier{xlc\} compiler on newer IBM processors. This
Chris@10 704 is fixed in FFTW 2.1.4.
Chris@10 705
Chris@10 706 \comment Here it ends!
Chris@10 707