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Add FFTW3
author Chris Cannam
date Wed, 20 Mar 2013 15:35:50 +0000
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Chris@10 3 <title>Introduction - FFTW 3.3.3</title>
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Chris@10 12 This manual is for FFTW
Chris@10 13 (version 3.3.3, 25 November 2012).
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Chris@10 15 Copyright (C) 2003 Matteo Frigo.
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Chris@10 17 Copyright (C) 2003 Massachusetts Institute of Technology.
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Chris@10 48 <a name="Introduction"></a>
Chris@10 49 <p>
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Chris@10 54 </div>
Chris@10 55
Chris@10 56 <h2 class="chapter">1 Introduction</h2>
Chris@10 57
Chris@10 58 <p>This manual documents version 3.3.3 of FFTW, the
Chris@10 59 <em>Fastest Fourier Transform in the West</em>. FFTW is a comprehensive
Chris@10 60 collection of fast C routines for computing the discrete Fourier
Chris@10 61 transform (DFT) and various special cases thereof.
Chris@10 62 <a name="index-discrete-Fourier-transform-1"></a><a name="index-DFT-2"></a>
Chris@10 63 <ul>
Chris@10 64 <li>FFTW computes the DFT of complex data, real data, even-
Chris@10 65 or odd-symmetric real data (these symmetric transforms are usually
Chris@10 66 known as the discrete cosine or sine transform, respectively), and the
Chris@10 67 discrete Hartley transform (DHT) of real data.
Chris@10 68
Chris@10 69 <li>The input data can have arbitrary length.
Chris@10 70 FFTW employs <i>O</i>(<i>n</i>&nbsp;log&nbsp;<i>n</i>) algorithms for all lengths, including
Chris@10 71 prime numbers.
Chris@10 72
Chris@10 73 <li>FFTW supports arbitrary multi-dimensional data.
Chris@10 74
Chris@10 75 <li>FFTW supports the SSE, SSE2, AVX, Altivec, and MIPS PS instruction
Chris@10 76 sets.
Chris@10 77
Chris@10 78 <li>FFTW includes parallel (multi-threaded) transforms
Chris@10 79 for shared-memory systems.
Chris@10 80 <li>Starting with version 3.3, FFTW includes distributed-memory parallel
Chris@10 81 transforms using MPI.
Chris@10 82 </ul>
Chris@10 83
Chris@10 84 <p>We assume herein that you are familiar with the properties and uses of
Chris@10 85 the DFT that are relevant to your application. Otherwise, see
Chris@10 86 e.g. <cite>The Fast Fourier Transform and Its Applications</cite> by E. O. Brigham
Chris@10 87 (Prentice-Hall, Englewood Cliffs, NJ, 1988).
Chris@10 88 <a href="http://www.fftw.org">Our web page</a> also has links to FFT-related
Chris@10 89 information online.
Chris@10 90 <a name="index-FFTW-3"></a>
Chris@10 91 <!-- TODO: revise. We don't need to brag any longer -->
Chris@10 92 <!-- FFTW is usually faster (and sometimes much faster) than all other -->
Chris@10 93 <!-- freely-available Fourier transform programs found on the Net. It is -->
Chris@10 94 <!-- competitive with (and often faster than) the FFT codes in Sun's -->
Chris@10 95 <!-- Performance Library, IBM's ESSL library, HP's CXML library, and -->
Chris@10 96 <!-- Intel's MKL library, which are targeted at specific machines. -->
Chris@10 97 <!-- Moreover, FFTW's performance is @emph{portable}. Indeed, FFTW is -->
Chris@10 98 <!-- unique in that it automatically adapts itself to your machine, your -->
Chris@10 99 <!-- cache, the size of your memory, your number of registers, and all the -->
Chris@10 100 <!-- other factors that normally make it impossible to optimize a program -->
Chris@10 101 <!-- for more than one machine. An extensive comparison of FFTW's -->
Chris@10 102 <!-- performance with that of other Fourier transform codes has been made, -->
Chris@10 103 <!-- and the results are available on the Web at -->
Chris@10 104 <!-- @uref{http://fftw.org/benchfft, the benchFFT home page}. -->
Chris@10 105 <!-- @cindex benchmark -->
Chris@10 106 <!-- @fpindex benchfft -->
Chris@10 107
Chris@10 108 <p>In order to use FFTW effectively, you need to learn one basic concept
Chris@10 109 of FFTW's internal structure: FFTW does not use a fixed algorithm for
Chris@10 110 computing the transform, but instead it adapts the DFT algorithm to
Chris@10 111 details of the underlying hardware in order to maximize performance.
Chris@10 112 Hence, the computation of the transform is split into two phases.
Chris@10 113 First, FFTW's <dfn>planner</dfn> &ldquo;learns&rdquo; the fastest way to compute the
Chris@10 114 transform on your machine. The planner
Chris@10 115 <a name="index-planner-4"></a>produces a data structure called a <dfn>plan</dfn> that contains this
Chris@10 116 <a name="index-plan-5"></a>information. Subsequently, the plan is <dfn>executed</dfn>
Chris@10 117 <a name="index-execute-6"></a>to transform the array of input data as dictated by the plan. The
Chris@10 118 plan can be reused as many times as needed. In typical
Chris@10 119 high-performance applications, many transforms of the same size are
Chris@10 120 computed and, consequently, a relatively expensive initialization of
Chris@10 121 this sort is acceptable. On the other hand, if you need a single
Chris@10 122 transform of a given size, the one-time cost of the planner becomes
Chris@10 123 significant. For this case, FFTW provides fast planners based on
Chris@10 124 heuristics or on previously computed plans.
Chris@10 125
Chris@10 126 <p>FFTW supports transforms of data with arbitrary length, rank,
Chris@10 127 multiplicity, and a general memory layout. In simple cases, however,
Chris@10 128 this generality may be unnecessary and confusing. Consequently, we
Chris@10 129 organized the interface to FFTW into three levels of increasing
Chris@10 130 generality.
Chris@10 131 <ul>
Chris@10 132 <li>The <dfn>basic interface</dfn> computes a single
Chris@10 133 transform of contiguous data.
Chris@10 134 <li>The <dfn>advanced interface</dfn> computes transforms
Chris@10 135 of multiple or strided arrays.
Chris@10 136 <li>The <dfn>guru interface</dfn> supports the most general data
Chris@10 137 layouts, multiplicities, and strides.
Chris@10 138 </ul>
Chris@10 139 We expect that most users will be best served by the basic interface,
Chris@10 140 whereas the guru interface requires careful attention to the
Chris@10 141 documentation to avoid problems.
Chris@10 142 <a name="index-basic-interface-7"></a><a name="index-advanced-interface-8"></a><a name="index-guru-interface-9"></a>
Chris@10 143
Chris@10 144 <p>Besides the automatic performance adaptation performed by the planner,
Chris@10 145 it is also possible for advanced users to customize FFTW manually. For
Chris@10 146 example, if code space is a concern, we provide a tool that links only
Chris@10 147 the subset of FFTW needed by your application. Conversely, you may need
Chris@10 148 to extend FFTW because the standard distribution is not sufficient for
Chris@10 149 your needs. For example, the standard FFTW distribution works most
Chris@10 150 efficiently for arrays whose size can be factored into small primes
Chris@10 151 (2, 3, 5, and 7), and otherwise it uses a
Chris@10 152 slower general-purpose routine. If you need efficient transforms of
Chris@10 153 other sizes, you can use FFTW's code generator, which produces fast C
Chris@10 154 programs (&ldquo;codelets&rdquo;) for any particular array size you may care
Chris@10 155 about.
Chris@10 156 <a name="index-code-generator-10"></a><a name="index-codelet-11"></a>For example, if you need transforms of size
Chris@10 157 513&nbsp;=&nbsp;19*3<sup>3</sup>,you can customize FFTW to support the factor 19 efficiently.
Chris@10 158
Chris@10 159 <p>For more information regarding FFTW, see the paper, &ldquo;The Design and
Chris@10 160 Implementation of FFTW3,&rdquo; by M. Frigo and S. G. Johnson, which was an
Chris@10 161 invited paper in <cite>Proc. IEEE</cite> <b>93</b> (2), p. 216 (2005). The
Chris@10 162 code generator is described in the paper &ldquo;A fast Fourier transform
Chris@10 163 compiler&rdquo;,
Chris@10 164 <a name="index-compiler-12"></a>by M. Frigo, in the <cite>Proceedings of the 1999 ACM SIGPLAN Conference
Chris@10 165 on Programming Language Design and Implementation (PLDI), Atlanta,
Chris@10 166 Georgia, May 1999</cite>. These papers, along with the latest version of
Chris@10 167 FFTW, the FAQ, benchmarks, and other links, are available at
Chris@10 168 <a href="http://www.fftw.org">the FFTW home page</a>.
Chris@10 169
Chris@10 170 <p>The current version of FFTW incorporates many good ideas from the past
Chris@10 171 thirty years of FFT literature. In one way or another, FFTW uses the
Chris@10 172 Cooley-Tukey algorithm, the prime factor algorithm, Rader's algorithm
Chris@10 173 for prime sizes, and a split-radix algorithm (with a
Chris@10 174 &ldquo;conjugate-pair&rdquo; variation pointed out to us by Dan Bernstein).
Chris@10 175 FFTW's code generator also produces new algorithms that we do not
Chris@10 176 completely understand.
Chris@10 177 <a name="index-algorithm-13"></a>The reader is referred to the cited papers for the appropriate
Chris@10 178 references.
Chris@10 179
Chris@10 180 <p>The rest of this manual is organized as follows. We first discuss the
Chris@10 181 sequential (single-processor) implementation. We start by describing
Chris@10 182 the basic interface/features of FFTW in <a href="Tutorial.html#Tutorial">Tutorial</a>.
Chris@10 183 Next, <a href="Other-Important-Topics.html#Other-Important-Topics">Other Important Topics</a> discusses data alignment
Chris@10 184 (see <a href="SIMD-alignment-and-fftw_005fmalloc.html#SIMD-alignment-and-fftw_005fmalloc">SIMD alignment and fftw_malloc</a>),
Chris@10 185 the storage scheme of multi-dimensional arrays
Chris@10 186 (see <a href="Multi_002ddimensional-Array-Format.html#Multi_002ddimensional-Array-Format">Multi-dimensional Array Format</a>), and FFTW's mechanism for
Chris@10 187 storing plans on disk (see <a href="Words-of-Wisdom_002dSaving-Plans.html#Words-of-Wisdom_002dSaving-Plans">Words of Wisdom-Saving Plans</a>). Next,
Chris@10 188 <a href="FFTW-Reference.html#FFTW-Reference">FFTW Reference</a> provides comprehensive documentation of all
Chris@10 189 FFTW's features. Parallel transforms are discussed in their own
Chris@10 190 chapters: <a href="Multi_002dthreaded-FFTW.html#Multi_002dthreaded-FFTW">Multi-threaded FFTW</a> and <a href="Distributed_002dmemory-FFTW-with-MPI.html#Distributed_002dmemory-FFTW-with-MPI">Distributed-memory FFTW with MPI</a>. Fortran programmers can also use FFTW, as described in
Chris@10 191 <a href="Calling-FFTW-from-Legacy-Fortran.html#Calling-FFTW-from-Legacy-Fortran">Calling FFTW from Legacy Fortran</a> and <a href="Calling-FFTW-from-Modern-Fortran.html#Calling-FFTW-from-Modern-Fortran">Calling FFTW from Modern Fortran</a>. <a href="Installation-and-Customization.html#Installation-and-Customization">Installation and Customization</a> explains how to
Chris@10 192 install FFTW in your computer system and how to adapt FFTW to your
Chris@10 193 needs. License and copyright information is given in <a href="License-and-Copyright.html#License-and-Copyright">License and Copyright</a>. Finally, we thank all the people who helped us in
Chris@10 194 <a href="Acknowledgments.html#Acknowledgments">Acknowledgments</a>.
Chris@10 195
Chris@10 196 </body></html>
Chris@10 197