annotate vendor/plugins/redmine_bibliography/app/controllers/publications_controller.rb @ 946:a0c9cc95bcf3 bibplugin_bibtex

Now parses a publication using the BibTex-ruby parser and displays both the "text" format and the bibtex format.
author luisf <luis.figueira@eecs.qmul.ac.uk>
date Thu, 12 Jul 2012 17:47:15 +0100
parents 2b665b7e67f4
children be4106d14a35 fe32745aaa3d
rev   line source
luisf@613 1 # -*- coding: utf-8 -*-
luis@385 2 # vendor/plugins/redmine_bibliography/app/controllers/publications_controller.rb
luis@385 3
luis@328 4 class PublicationsController < ApplicationController
luis@425 5 unloadable
luis@946 6
luis@560 7 model_object Publication
luis@675 8 before_filter :find_model_object, :except => [:new, :create, :index, :get_bibtex_required_fields, :autocomplete_for_project, :add_author, :sort_author_order, :autocomplete_for_author, :get_user_info ]
luis@631 9 before_filter :find_project_by_project_id, :authorize, :only => [ :edit, :new, :update, :create ]
luis@946 10
luis@404 11 def new
luis@539 12 find_project_by_project_id
luis@539 13 @publication = Publication.new
luis@946 14
luis@445 15 # we'll always want a new publication to have its bibtex entry
luis@539 16 @publication.build_bibtex_entry
luis@946 17
luis@446 18 # and at least one author
luis@608 19 # @publication.authorships.build.build_author
chris@647 20 @author_options = [["#{User.current.name} (@#{User.current.mail.partition('@')[2]})", "#{User.current.class.to_s}_#{User.current.id.to_s}"]]
luis@614 21
luis@614 22
luis@519 23 end
luis@409 24
luis@539 25 def create
luisf@613 26 @project = Project.find(params[:project_id])
luisf@613 27
chris@661 28 @author_options = []
luis@614 29
luis@390 30 @publication = Publication.new(params[:publication])
luis@553 31 @publication.projects << @project unless @project.nil?
luis@946 32
luis@448 33 if @publication.save
luis@666 34 @publication.notify_authors_publication_added(@project)
luis@946 35
luis@445 36 flash[:notice] = "Successfully created publication."
luisf@613 37 redirect_to :action => :show, :id => @publication, :project_id => @project
luis@445 38 else
luisf@613 39 render :action => 'new', :project_id => @project
luis@445 40 end
luis@445 41 end
luis@445 42
luis@445 43 def index
luis@538 44 if !params[:project_id].nil?
luis@538 45 find_project_by_project_id
luis@538 46 @project = Project.find(params[:project_id])
luis@538 47 @publications = Publication.find :all, :joins => :projects, :conditions => ["project_id = ?", @project.id]
luis@538 48 else
luis@538 49 @publications = Publication.find :all
luis@538 50 end
luis@445 51 end
luis@445 52
luis@445 53 def new_from_bibfile
luis@391 54 @publication.current_step = session[:publication_step]
luis@946 55
luis@404 56 # contents of the paste text area
luis@404 57 bibtex_entry = params[:bibtex_entry]
luis@384 58
luis@404 59 # method for creating "pasted" bibtex entries
luis@424 60 if bibtex_entry
luis@409 61 parse_bibtex_list bibtex_entry
luis@404 62 end
luis@329 63 end
luis@329 64
luis@675 65 def get_bibtex_required_fields
luis@675 66
luis@699 67 unless params[:value].empty?
luis@699 68 fields = BibtexEntryType.fields(params[:value])
luis@699 69 end
luis@675 70
luis@675 71 respond_to do |format|
luis@675 72 format.js {
luis@699 73 render(:update) {|page|
luis@699 74 if params[:value].empty?
luis@699 75 page << "hideOnLoad();"
luis@699 76 else
luis@699 77 page << "show_required_bibtex_fields(#{fields.to_json()});"
luis@675 78 end
luis@675 79 }
luis@675 80 }
luis@946 81
luis@675 82 end
luis@675 83 end
luis@675 84
luis@467 85 def add_author
luis@467 86 if (request.xhr?)
luis@467 87 render :text => User.find(params[:user_id]).name
luis@467 88 else
luis@467 89 # No? Then render an action.
luis@467 90 #render :action => 'view_attribute', :attr => @name
luis@675 91 logger.error { "Error while adding Author to publication." }
luis@467 92 end
luis@467 93 end
luis@467 94
luis@547 95 def edit
luis@547 96 find_project_by_project_id unless params[:project_id].nil?
luis@946 97
luis@609 98 @edit_view = true;
luis@428 99 @publication = Publication.find(params[:id])
luis@626 100 @selected_bibtex_entry_type_id = @publication.bibtex_entry.entry_type
luis@626 101
chris@647 102 @author_options = []
luis@946 103
luis@685 104 @bibtype_fields = BibtexEntryType.fields(@selected_bibtex_entry_type_id)
luis@430 105 end
luis@430 106
luis@445 107 def update
luis@448 108 @publication = Publication.find(params[:id])
luis@538 109
chris@661 110 @author_options = []
luis@626 111
luis@544 112 logger.error { "INSIDE THE UPDATE ACTION IN THE PUBLICATION CONTROLLER" }
luis@544 113
luis@430 114 if @publication.update_attributes(params[:publication])
luis@430 115 flash[:notice] = "Successfully updated Publication."
luis@538 116
luis@538 117 if !params[:project_id].nil?
luis@538 118 redirect_to :action => :show, :id => @publication, :project_id => params[:project_id]
luis@538 119 else
luis@538 120 redirect_to :action => :show, :id => @publication
luis@538 121 end
luis@430 122 else
luis@448 123 render :action => 'edit'
luis@448 124 end
luis@328 125 end
luis@328 126
luis@946 127
luis@425 128 def show
luis@535 129 find_project_by_project_id unless params[:project_id].nil?
luis@946 130
luis@425 131 if @publication.nil?
luis@579 132 @publications = Publication.all
luis@579 133 render "index", :alert => 'The publication was not found!'
luis@425 134 else
luis@425 135 @authors = @publication.authors
luis@425 136 @bibtext_entry = @publication.bibtex_entry
luis@425 137 end
luis@329 138 end
luis@329 139
luis@406 140 # parse string with bibtex authors
luis@406 141 def parse_authors(authors_entry)
luis@406 142 # in bibtex the authors are always seperated by "and"
luis@407 143 return authors_entry.split(" and ")
luis@406 144 end
luis@406 145
luis@406 146 # parses a list of bibtex
luis@406 147 def parse_bibtex_list(bibtex_list)
luis@406 148 bibliography = BibTeX.parse bibtex_list
luis@406 149
luis@406 150 no_entries = bibliography.data.length
luis@406 151
luis@406 152 # parses the bibtex entries
luis@406 153 bibliography.data.map do |d|
luis@407 154
luis@407 155 if d.class == BibTeX::Entry
luis@407 156 create_bibtex_entry d
luis@407 157 end
luis@406 158 end
luis@407 159 end
luis@407 160
luis@409 161 def create_bibtex_entry(d)
luis@407 162 @publication = Publication.new
luis@407 163 @bentry = BibtexEntry.new
luis@407 164 authors = []
luis@407 165 institution = ""
luis@407 166 email = ""
luis@409 167
luis@407 168 d.fields.keys.map do |field|
luis@407 169 case field.to_s
luis@407 170 when "author"
luis@407 171 authors = parse_authors d[field]
luis@407 172 when "title"
luis@407 173 @publication.title = d[field]
luis@407 174 when "institution"
luis@407 175 institution = d[field]
luis@407 176 when "email"
luis@407 177 email = d[field]
luis@407 178 else
luis@407 179 @bentry[field] = d[field]
luis@407 180 end
luis@407 181 end
luis@406 182
luis@406 183 @publication.bibtex_entry = @bentry
luis@407 184 @publication.save
luis@409 185
luis@424 186 # what is this for???
luis@424 187 # @created_publications << @publication.id
luis@409 188
luis@407 189 # need to save all authors
luis@407 190 # and establish the author-publication association
luis@407 191 # via the authorships table
luis@407 192 authors.each_with_index.map do |authorname, idx|
luis@407 193 author = Author.new(:name => authorname)
luis@407 194 if author.save!
luis@946 195 # todo: catch the errors...
luis@407 196 puts "SAVED"
luis@407 197 else
luis@407 198 puts "NOT SAVED"
luis@406 199 end
luis@406 200
luis@407 201 author.authorships.create!(
luis@946 202 :publication => @publication,
luis@946 203 :institution => institution,
luis@946 204 :email => email,
luis@946 205 :order => idx)
luis@407 206 end
luis@407 207 end
luis@409 208
luis@407 209 # parses the bibtex file
luis@407 210 def parse_bibtex_file
luis@407 211
luis@406 212 end
luis@406 213
luis@444 214 def import
luis@444 215 @publication = Publication.new
luis@946 216
luis@946 217
luis@444 218 end
luis@946 219
luis@461 220 def autocomplete_for_project
luis@461 221 @publication = Publication.find(params[:id])
luis@946 222
luis@464 223 @projects = Project.active.like(params[:q]).find(:all, :limit => 100) - @publication.projects
luis@461 224 logger.debug "Query for \"#{params[:q]}\" returned \"#{@projects.size}\" results"
luis@461 225 render :layout => false
luis@409 226 end
luis@471 227
luis@601 228 def autocomplete_for_author
luis@519 229 @results = []
luis@946 230
luis@596 231 object_id = params[:object_id]
luis@598 232 @object_name = "publications[authorships_attributes][#{object_id}][search_results]"
luis@946 233
Chris@674 234 # cc 20110909 -- revert to like instead of like_unique -- see #289
Chris@674 235 authorships_list = Authorship.like(params[:q]).find(:all, :limit => 100)
luis@480 236 users_list = User.active.like(params[:q]).find(:all, :limit => 100)
luis@480 237
luis@591 238 logger.debug "Query for \"#{params[:q]}\" returned \"#{authorships_list.size}\" authorships and \"#{users_list.size}\" users"
luis@946 239
luis@601 240 @results = users_list
luis@601 241
luis@601 242 # TODO: can be optimized…
luis@601 243 authorships_list.each do |authorship|
luis@601 244 flag = true
luis@946 245
luis@601 246 users_list.each do |user|
luis@601 247 if authorship.name == user.name && authorship.email == user.mail && authorship.institution == user.institution
luis@601 248 Rails.logger.debug { "Rejecting Authorship #{authorship.id}" }
luis@601 249 flag = false
luis@601 250 break
luis@601 251 end
luis@601 252 end
luis@601 253
luis@601 254 @results << authorship if flag
luis@592 255 end
luis@592 256
luis@598 257 render :layout => false
luis@598 258 end
luis@946 259
luis@598 260 def get_user_info
luis@598 261 object_id = params[:object_id]
luis@598 262 value = params[:value]
luis@598 263 classname = Kernel.const_get(value.split('_')[0])
luis@592 264
luis@598 265 item = classname.find(value.split('_')[1])
luis@598 266
luis@598 267 name_field = "publication_authorships_attributes_#{object_id}_name_on_paper".to_sym
luis@598 268 email_field = "publication_authorships_attributes_#{object_id}_email".to_sym
luis@600 269 institution_field = "publication_authorships_attributes_#{object_id}_institution".to_sym
luis@946 270
luis@600 271 yes_radio = "publication_authorships_attributes_#{object_id}_identify_author_yes".to_sym
luis@946 272
luis@598 273 respond_to do |format|
luis@675 274 format.js {
luis@598 275 render(:update) {|page|
luis@598 276 page[name_field].value = item.name
luis@598 277 page[email_field].value = item.mail
luis@600 278 page[institution_field].value = item.institution
luis@600 279
luis@600 280 page[yes_radio].checked = true
luis@601 281 page[name_field].readOnly = true
luis@601 282 page[email_field].readOnly = true
luis@601 283 page[institution_field].readOnly = true
luis@598 284 }
luis@598 285 }
luis@598 286 end
luis@477 287 end
luis@471 288
luis@557 289 def sort_author_order
luis@557 290 params[:authorships].each_with_index do |id, index|
luis@557 291 Authorship.update_all(['auth_order=?', index+1], ['id=?', id])
luis@471 292 end
luis@471 293 render :nothing => true
luis@471 294 end
luis@574 295
luis@574 296 def add_project
luis@574 297 @projects = Project.find(params[:publication][:project_ids])
luis@574 298 @publication.projects << @projects
luis@579 299 @project = Project.find(params[:project_id])
luis@946 300
luis@574 301 # TODO luisf should also respond to HTML???
luis@574 302 respond_to do |format|
luis@574 303 format.html { redirect_to :back }
luis@574 304 format.js {
luis@574 305 render(:update) {|page|
luis@574 306 page[:add_project_form].reset
luis@574 307 page.replace_html :list_projects, :partial => 'list_projects'
luis@574 308 }
luis@574 309 }
luis@574 310 end
luis@574 311 end
luis@946 312
luis@946 313
luis@574 314 def remove_project
luis@579 315 @project = Project.find(params[:project_id])
luis@579 316 proj = Project.find(params[:remove_project_id])
luis@554 317
luis@574 318 if @publication.projects.length > 1
luis@579 319 if @publication.projects.exists? proj
luis@579 320 @publication.projects.delete proj if request.post?
luis@554 321 end
luis@554 322 else
luis@579 323 logger.error { "Cannot remove project from publication list" }
luis@554 324 end
luis@946 325
luis@591 326 logger.error { "CURRENT project name#{proj.name} and wanna delete #{@project.name}" }
luis@946 327
luis@579 328 render(:update) {|page|
luis@579 329 page.replace_html "list_projects", :partial => 'list_projects', :id => @publication
luis@579 330 }
luis@554 331 end
luis@946 332
luis@560 333 def destroy
luis@560 334 find_project_by_project_id
luis@946 335
luis@560 336 @publication.destroy
luis@946 337
luis@560 338 flash[:notice] = "Successfully deleted Publication."
luis@560 339 redirect_to :controller => :publications, :action => 'index', :project_id => @project
luis@560 340 end
luis@471 341
luis@538 342 private
luis@478 343
luis@328 344 end