Mercurial > hg > plosone_underreview

changeset 41:57f53b0d1eaa branch-tests

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fixed crashed notebook
author Maria Panteli <m.x.panteli@gmail.com>
date Fri, 15 Sep 2017 12:27:11 +0100
parents e6e10013e11c
children 90f8a2ea6f6f b1d9ba5f888e
files notebooks/test_hubness.ipynb
diffstat 1 files changed, 15 insertions(+), 22 deletions(-) [+]
line wrap: on
line diff
--- a/notebooks/test_hubness.ipynb	Fri Sep 15 11:55:00 2017 +0100
+++ b/notebooks/test_hubness.ipynb	Fri Sep 15 12:27:11 2017 +0100
@@ -2,7 +2,7 @@
  "cells": [
   {
    "cell_type": "code",
-   "execution_count": 2,
+   "execution_count": 1,
    "metadata": {
     "collapsed": true
    },
@@ -27,17 +27,23 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 3,
-   "metadata": {
-    "collapsed": false
-   },
+   "execution_count": 2,
+   "metadata": {},
    "outputs": [
     {
+     "name": "stderr",
+     "output_type": "stream",
+     "text": [
+      "/homes/mp305/anaconda/lib/python2.7/site-packages/pysal/weights/weights.py:189: UserWarning: There are 21 disconnected observations\n",
+      "  warnings.warn(\"There are %d disconnected observations\" % ni)\n",
+      "/homes/mp305/anaconda/lib/python2.7/site-packages/pysal/weights/weights.py:190: UserWarning: Island ids: 3, 6, 26, 35, 39, 45, 52, 61, 62, 66, 77, 85, 94, 97, 98, 102, 103, 107, 110, 120, 121\n",
+      "  warnings.warn(\"Island ids: %s\" % ', '.join(str(island) for island in self.islands))\n"
+     ]
+    },
+    {
      "name": "stdout",
      "output_type": "stream",
      "text": [
-      "WARNING: there are 21 disconnected observations\n",
-      "Island ids:  [3, 6, 26, 35, 39, 45, 52, 61, 62, 66, 77, 85, 94, 97, 98, 102, 103, 107, 110, 120, 121]\n",
       "Antigua and Barbuda\n",
       "Australia\n",
       "Cuba\n",
@@ -77,9 +83,7 @@
   {
    "cell_type": "code",
    "execution_count": 3,
-   "metadata": {
-    "collapsed": false
-   },
+   "metadata": {},
    "outputs": [
     {
      "data": {
@@ -110,8 +114,6 @@
   {
    "cell_type": "code",
    "execution_count": 5,
-    "collapsed": false
-   },
    "metadata": {},
    "outputs": [
     {
@@ -132,8 +134,6 @@
   {
    "cell_type": "code",
    "execution_count": 6,
-    "collapsed": false
-   },
    "metadata": {},
    "outputs": [
     {
@@ -171,11 +171,6 @@
   {
    "cell_type": "code",
    "execution_count": 8,
-   "outputs": [
-      "\u001b[0;31m---------------------------------------------------------------------------\u001b[0m",
-      "\u001b[0;31mNameError\u001b[0m                                 Traceback (most recent call last)",
-      "\u001b[0;32m<ipython-input-1-0aacb5dec8fd>\u001b[0m in \u001b[0;36m<module>\u001b[0;34m()\u001b[0m\n\u001b[0;32m----> 1\u001b[0;31m \u001b[0mN_k\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mn_occurrence_from_D\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mD\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mk\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0;36m100\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m      2\u001b[0m \u001b[0;32mprint\u001b[0m \u001b[0mskew\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mN_k\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m      3\u001b[0m \u001b[0mplt\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mfigure\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m      4\u001b[0m \u001b[0mplt\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mhist\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mN_k\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mbins\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0;36m100\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m;\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m      5\u001b[0m \u001b[0mplt\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mfigure\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
-      "\u001b[0;31mNameError\u001b[0m: name 'n_occurrence_from_D' is not defined"
    "metadata": {},
    "outputs": [
     {
@@ -239,9 +234,7 @@
   {
    "cell_type": "code",
    "execution_count": 17,
-   "metadata": {
-    "collapsed": false
-   },
+   "metadata": {},
    "outputs": [
     {
      "data": {