annotate toolboxes/FullBNT-1.0.7/bnt/inference/dynamic/@hmm_inf_engine/private/mk_hmm_obs_lik_matrix.m @ 0:e9a9cd732c1e tip

first hg version after svn
author wolffd
date Tue, 10 Feb 2015 15:05:51 +0000
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wolffd@0 1 function obslik = mk_hmm_obs_lik_matrix(engine, evidence)
wolffd@0 2
wolffd@0 3 T = size(evidence,2);
wolffd@0 4 Q = length(engine.startprob);
wolffd@0 5 obslik = ones(Q, T);
wolffd@0 6 bnet = bnet_from_engine(engine);
wolffd@0 7 % P(o1,o2| Q1,Q2) = P(o1|Q1,Q2) * P(o2|Q1,Q2)
wolffd@0 8 onodes = bnet.observed;
wolffd@0 9 for i=1:length(onodes)
wolffd@0 10 data = cell2num(evidence(onodes(i),:));
wolffd@0 11 if bnet.auto_regressive(onodes(i))
wolffd@0 12 params = engine.obsprob{i};
wolffd@0 13 mu = params.big_mu;
wolffd@0 14 Sigma = params.big_Sigma,
wolffd@0 15 W = params.big_W;
wolffd@0 16 mu0 = params.big_mu0;
wolffd@0 17 Sigma0 = params.big_Sigma0;
wolffd@0 18 %obslik_i = mk_arhmm_obs_lik(data, mu, Sigma, W, mu0, Sigma0
wolffd@0 19 obslik_i = clg_prob(data(:,1:T-1), data(:,2:T), mu, Sigma, W);
wolffd@0 20 obslik_i = [mixgauss_prob(data(:,1), mu0, Sigma0) obslik_i];
wolffd@0 21 elseif myismember(onodes(i), bnet.dnodes)
wolffd@0 22 %obslik_i = eval_pdf_cond_multinomial(data, engine.obsprob{i}.big_CPT);
wolffd@0 23 obslik_i = multinomial_prob(data, engine.obsprob{i}.big_CPT);
wolffd@0 24 else
wolffd@0 25 %obslik_i = eval_pdf_cond_gauss(data, engine.obsprob{i}.big_mu, engine.obsprob{i}.big_Sigma);
wolffd@0 26 obslik_i = mixgauss_prob(data, engine.obsprob{i}.big_mu, engine.obsprob{i}.big_Sigma);
wolffd@0 27 end
wolffd@0 28 obslik = obslik .* obslik_i;
wolffd@0 29 end
wolffd@0 30