Revision 26:b03ef38fe497 parameterStore/MAPparamsEndo.m

View differences:

parameterStore/MAPparamsEndo.m
1 1 
function method=MAPparamsEndo ...
2 
    (BFlist, sampleRate, showParams)
2 
    (BFlist, sampleRate, showParams, paramChanges)
3 3 
% MAPparams<> establishes a complete set of MAP parameters
4 4 
% Parameter file names must be of the form <MAPparams> <name>
5 5 
%
......
58 58 
% i.e. a minimum ratio of 0.056.
59 59 
% 'spikes' model: AR based on brainstem spiking activity (LSR)
60 60 
OMEParams.rateToAttenuationFactor=0.006;   % * N(all ICspikes)
61 
%     OMEParams.rateToAttenuationFactor=0;   % * N(all ICspikes)
61 
% OMEParams.rateToAttenuationFactor=0;   % * N(all ICspikes)
62 62 

  		




  63
  63
  
    
% 'probability model': Ar based on AN firing probabilities (LSR)


  		




  64
  64
  
    
OMEParams.rateToAttenuationFactorProb=0.01;% * N(all ANrates)


  		




  65
  
  
    
%     OMEParams.rateToAttenuationFactorProb=0;% * N(all ANrates)


  		




  
  65
  
    
% OMEParams.rateToAttenuationFactorProb=0;% * N(all ANrates)


  		




  66
  66
  
    

  		




  67
  67
  
    
% asymptote should be around 100-200 ms


  		




  68
  68
  
    
OMEParams.ARtau=.05; % AR smoothing function


  		




  ......




  104
  104
  
    
DRNLParams.rateToAttenuationFactor = .01;  % strength of MOC


  		




  105
  105
  
    
%      DRNLParams.rateToAttenuationFactor = 0;  % strength of MOC


  		




  106
  106
  
    
% 'probability' model: MOC based on AN spiking activity (HSR)


  		




  107
  
  
    
DRNLParams.rateToAttenuationFactorProb = .005;  % strength of MOC


  		




  
  107
  
    
DRNLParams.rateToAttenuationFactorProb = .0055;  % strength of MOC


  		




  108
  108
  
    
% DRNLParams.rateToAttenuationFactorProb = .0;  % strength of MOC


  		




  109
  
  
    
DRNLParams.MOCrateThreshold =70;                % spikes/s probability only


  		




  
  109
  
    
DRNLParams.MOCrateThresholdProb =70;                % spikes/s probability only


  		




  110
  110
  
    

  		




  111
  111
  
    
DRNLParams.MOCtau =.1;                         % smoothing for MOC


  		




  112
  112
  
    

  		




  ......




  263
  263
  
    
end


  		




  264
  264
  
    

  		




  265
  265
  
    

  		




  
  266
  
    
%% now accept last minute parameter changes required by the calling program


  		




  
  267
  
    
% paramChanges


  		




  
  268
  
    
if nargin>3 && ~isempty(paramChanges)


  		




  
  269
  
    
    nChanges=length(paramChanges);


  		




  
  270
  
    
    for idx=1:nChanges


  		




  
  271
  
    
        eval(paramChanges{idx})


  		




  
  272
  
    
    end


  		




  
  273
  
    
end


  		




  
  274
  
    

  		




  
  275
  
    

  		




  266
  276
  
    
%% write all parameters to the command window


  		




  267
  277
  
    
% showParams is currently set at the top of htis function


  		




  268
  278
  
    
if showParams


  		




  ......




  276
  286
  
    
            eval(['UTIL_showStructureSummary(' nm{i} ', ''' nm{i} ''', 10)'])


  		




  277
  287
  
    
        end


  		




  278
  288
  
    
    end


  		




  
  289
  
    

  		




  
  290
  
    
    % highlight parameter changes made locally


  		




  
  291
  
    
    if nargin>3 && ~isempty(paramChanges)


  		




  
  292
  
    
        fprintf('\n Local parameter changes:\n')


  		




  
  293
  
    
        for i=1:length(paramChanges)


  		




  
  294
  
    
            disp(paramChanges{i})


  		




  
  295
  
    
        end


  		




  
  296
  
    
    end


  		




  279
  297
  
    
end


  		




  280
  298
  
    

  		




  281
  299
  
    

  		












Also available in:  Unified diff