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Expose the processing parameters Simon suggests
Fix compiler warnings, etc
Allocate Agents separately on the heap and make AgentList contain pointers only (much quicker)
refactor: pull method implementations into .cpp files
More debug output, and a minor fix
Debug output, and some actual debugging... getting there.
Many fixes. This now compiles and passes the plugin tester, but I don't expect it produces any results yet.
Add agent list class, and continue plodding through
Introduce a number of new classes derived from the Java