comparison scripts/score_parser.py @ 1072:2ea78697aadf

Scripts: comment_parser and score_parser start new CSV files each time; various plots added to generated PDF report
author Brecht De Man <BrechtDeMan@users.noreply.github.com>
date Thu, 20 Aug 2015 11:29:29 +0200
parents a2a245542ae6
children 235594325b84
comparison
equal deleted inserted replaced
1071:e2dd3105a84c 1072:2ea78697aadf
2 2
3 import xml.etree.ElementTree as ET 3 import xml.etree.ElementTree as ET
4 import os 4 import os
5 import sys 5 import sys
6 import csv 6 import csv
7
8 #TODO Remove DEBUG statements
9 7
10 # COMMAND LINE ARGUMENTS 8 # COMMAND LINE ARGUMENTS
11 9
12 assert len(sys.argv)<3, "score_parser takes at most 1 command line argument\n"+\ 10 assert len(sys.argv)<3, "score_parser takes at most 1 command line argument\n"+\
13 "Use: python score_parser.py [rating_folder_location]" 11 "Use: python score_parser.py [rating_folder_location]"
30 print "No write privileges in folder '"+folder_name+"'." 28 print "No write privileges in folder '"+folder_name+"'."
31 29
32 30
33 # CODE 31 # CODE
34 32
33 # remember which files have been opened this time
34 file_history = []
35
35 # get every XML file in folder 36 # get every XML file in folder
36 for file in os.listdir(folder_name): 37 for file in os.listdir(folder_name):
37 if file.endswith(".xml"): 38 if file.endswith(".xml"):
38 tree = ET.parse(folder_name + '/' + file) 39 tree = ET.parse(folder_name + '/' + file)
39 root = tree.getroot() 40 root = tree.getroot()
40 #print "DEBUG Reading " + file + "..."
41 41
42 # get subject ID from XML file 42 # get subject ID from XML file
43 subject_id = file[:-4] # file name (without extension) as subject ID 43 subject_id = file[:-4] # file name (without extension) as subject ID
44 44
45 # get list of all pages this subject evaluated 45 # get list of all pages this subject evaluated
50 print "WARNING: " + file + " contains empty audio holder. (score_parser.py)" 50 print "WARNING: " + file + " contains empty audio holder. (score_parser.py)"
51 break 51 break
52 52
53 file_name = folder_name+'/ratings/'+page_name+'-ratings.csv' # score file name 53 file_name = folder_name+'/ratings/'+page_name+'-ratings.csv' # score file name
54 54
55 # create folder 'ratings if not yet created 55 # create folder 'ratings' if not yet created
56 if not os.path.exists(folder_name + '/ratings'): 56 if not os.path.exists(folder_name + '/ratings'):
57 os.makedirs(folder_name + '/ratings') 57 os.makedirs(folder_name + '/ratings')
58 58
59 # header: fragment IDs in 'alphabetical' order 59 # header: fragment IDs in 'alphabetical' order
60 # go to fragment column, or create new column if it doesn't exist yet 60 # go to fragment column, or create new column if it doesn't exist yet
66 # get alphabetical array of fragment IDs from this subject's XML 66 # get alphabetical array of fragment IDs from this subject's XML
67 fragmentnamelist = [] # make empty list 67 fragmentnamelist = [] # make empty list
68 for audioelement in audiolist: # iterate over all audioelements 68 for audioelement in audiolist: # iterate over all audioelements
69 fragmentnamelist.append(audioelement.get('id')) # add to list 69 fragmentnamelist.append(audioelement.get('id')) # add to list
70 70
71
72 # if file exists, get header and add 'new' fragments 71 # if file exists, get header and add 'new' fragments
73 if os.path.isfile(file_name): 72 if os.path.isfile(file_name):
74 #print "DEBUG file " + file_name + " already exists - reading header"
75 with open(file_name, 'r') as readfile: 73 with open(file_name, 'r') as readfile:
76 filereader = csv.reader(readfile, delimiter=',') 74 filereader = csv.reader(readfile, delimiter=',')
77 headerrow = filereader.next() 75 headerrow = filereader.next()
76
77 # If file hasn't been opened yet this time, remove all rows except header
78 if file_name not in file_history:
79 with open(file_name, 'w') as writefile:
80 filewriter = csv.writer(writefile, delimiter=',')
81 headerrow = sorted(headerrow)
82 filewriter.writerow(headerrow)
83 file_history.append(file_name)
78 84
79 # Which of the fragmentes are in fragmentnamelist but not in headerrow? 85 # Which of the fragmentes are in fragmentnamelist but not in headerrow?
80 newfragments = list(set(fragmentnamelist)-set(headerrow)) 86 newfragments = list(set(fragmentnamelist)-set(headerrow))
81 newfragments = sorted(newfragments) # new fragments in alphabetical order 87 newfragments = sorted(newfragments) # new fragments in alphabetical order
82 # If not empty, read file and rewrite adding extra columns 88 # If not empty, read file and rewrite adding extra columns
83 if newfragments: # if not empty 89 if newfragments: # if not empty
84 #print "DEBUG New fragments found: " + str(newfragments)
85 with open('temp.csv', 'w') as writefile: 90 with open('temp.csv', 'w') as writefile:
86 filewriter = csv.writer(writefile, delimiter=',') 91 filewriter = csv.writer(writefile, delimiter=',')
87 filewriter.writerow(headerrow + newfragments) # write new header 92 filewriter.writerow(headerrow + newfragments) # write new header
88 #print " "+str(headerrow + newfragments) # DEBUG
89 with open(file_name, 'r') as readfile: 93 with open(file_name, 'r') as readfile:
90 filereader = csv.reader(readfile, delimiter=',') 94 filereader = csv.reader(readfile, delimiter=',')
91 filereader.next() # skip header 95 filereader.next() # skip header
92 for row in filereader: # rewrite row plus empty cells for every new fragment name 96 for row in filereader: # rewrite row plus empty cells for every new fragment name
93 #print " Old row: " + str(row) # DEBUG
94 filewriter.writerow(row + ['']*len(newfragments)) 97 filewriter.writerow(row + ['']*len(newfragments))
95 #print " New row: " + str(row + ['']*len(newfragments)) # DEBUG
96 os.rename('temp.csv', file_name) # replace old file with temp file 98 os.rename('temp.csv', file_name) # replace old file with temp file
97 headerrow = headerrow + newfragments 99 headerrow = headerrow + newfragments
98 #print "DEBUG New header row: " + str(headerrow)
99 100
100 # if not, create file and make header 101 # if not, create file and make header
101 else: 102 else:
102 #print ["DEBUG file " + file_name + " doesn't exist yet - making new one"]
103 headerrow = sorted(fragmentnamelist) # sort alphabetically 103 headerrow = sorted(fragmentnamelist) # sort alphabetically
104 headerrow.insert(0,'') 104 headerrow.insert(0,'')
105 fragmentnamelist = fragmentnamelist[1:] #HACKY FIX inserting in firstrow also affects fragmentnamelist 105 fragmentnamelist = fragmentnamelist[1:] #HACKY FIX inserting in firstrow also affects fragmentnamelist
106 with open(file_name, 'w') as writefile: 106 with open(file_name, 'w') as writefile:
107 filewriter = csv.writer(writefile, delimiter=',') 107 filewriter = csv.writer(writefile, delimiter=',')
125 ratingrow.append('') # append empty cell 125 ratingrow.append('') # append empty cell
126 126
127 # write row: [subject ID, rating fragment ID 1, ..., rating fragment ID M] 127 # write row: [subject ID, rating fragment ID 1, ..., rating fragment ID M]
128 if any(ratingrow[1:]): # append to file if row non-empty (except subject name) 128 if any(ratingrow[1:]): # append to file if row non-empty (except subject name)
129 filewriter.writerow(ratingrow) 129 filewriter.writerow(ratingrow)
130