annotate scripts/score_parser.py @ 294:df7263170715 Dev_main

Bug #1370: Fragments marked as outside reference are no longer checked for movement parameters in APE.
author Nicholas Jillings <n.g.r.jillings@se14.qmul.ac.uk>
date Thu, 10 Sep 2015 12:32:56 +0100
parents 3c5689af726b
children 4345ba8a1b6e
rev   line source
b@246 1 #!/usr/bin/python
b@246 2
b@147 3 import xml.etree.ElementTree as ET
b@147 4 import os
b@147 5 import csv
b@147 6
b@147 7 #TODO Remove DEBUG statements
b@147 8
b@245 9 # XML results files location (modify as needed):
b@245 10 folder_name = "../saves" # Looks in 'saves/' folder from 'scripts/' folder
b@245 11
b@147 12 # get every XML file in folder
b@247 13 for file in os.listdir(folder_name):
b@147 14 if file.endswith(".xml"):
b@245 15 tree = ET.parse(folder_name + '/' + file)
b@147 16 root = tree.getroot()
b@246 17 #print "DEBUG Reading " + file + "..."
b@147 18
b@147 19 # get subject ID from XML file
b@246 20 subject_id = file[:-4] # file name (without extension) as subject ID
b@147 21
b@147 22 # get list of all pages this subject evaluated
b@147 23 for audioholder in root.findall("./audioholder"): # iterate over pages
b@147 24 page_name = audioholder.get('id') # get page name
b@246 25
b@206 26 if page_name is None: # ignore 'empty' audio_holders
b@251 27 print "WARNING: " + file + " contains empty audio holder. (score_parser.py)"
b@206 28 break
b@147 29
b@245 30 file_name = folder_name+'/ratings/'+page_name+'-ratings.csv' # score file name
b@147 31
b@147 32 # create folder 'ratings if not yet created
b@245 33 if not os.path.exists(folder_name + '/ratings'):
b@245 34 os.makedirs(folder_name + '/ratings')
b@147 35
b@147 36 # header: fragment IDs in 'alphabetical' order
b@147 37 # go to fragment column, or create new column if it doesn't exist yet
b@147 38
b@147 39 # get array of audio elements and number of audio elements
b@245 40 audiolist = audioholder.findall("./audioelement")
b@147 41 n_fragments = len(audiolist)
b@147 42
b@147 43 # get alphabetical array of fragment IDs from this subject's XML
b@147 44 fragmentnamelist = [] # make empty list
b@147 45 for audioelement in audiolist: # iterate over all audioelements
b@147 46 fragmentnamelist.append(audioelement.get('id')) # add to list
b@147 47
b@147 48
b@147 49 # if file exists, get header and add 'new' fragments
b@147 50 if os.path.isfile(file_name):
b@246 51 #print "DEBUG file " + file_name + " already exists - reading header"
b@147 52 with open(file_name, 'r') as readfile:
b@147 53 filereader = csv.reader(readfile, delimiter=',')
b@147 54 headerrow = filereader.next()
b@147 55
b@246 56 # Which of the fragmentes are in fragmentnamelist but not in headerrow?
b@246 57 newfragments = list(set(fragmentnamelist)-set(headerrow))
b@246 58 newfragments = sorted(newfragments) # new fragments in alphabetical order
b@246 59 # If not empty, read file and rewrite adding extra columns
b@246 60 if newfragments: # if not empty
b@246 61 #print "DEBUG New fragments found: " + str(newfragments)
b@246 62 with open('temp.csv', 'w') as writefile:
b@246 63 filewriter = csv.writer(writefile, delimiter=',')
b@246 64 filewriter.writerow(headerrow + newfragments) # write new header
b@246 65 #print " "+str(headerrow + newfragments) # DEBUG
b@246 66 with open(file_name, 'r') as readfile:
b@246 67 filereader = csv.reader(readfile, delimiter=',')
b@246 68 filereader.next() # skip header
b@147 69 for row in filereader: # rewrite row plus empty cells for every new fragment name
b@246 70 #print " Old row: " + str(row) # DEBUG
b@147 71 filewriter.writerow(row + ['']*len(newfragments))
b@246 72 #print " New row: " + str(row + ['']*len(newfragments)) # DEBUG
b@246 73 os.rename('temp.csv', file_name) # replace old file with temp file
b@246 74 headerrow = headerrow + newfragments
b@246 75 #print "DEBUG New header row: " + str(headerrow)
b@147 76
b@147 77 # if not, create file and make header
b@147 78 else:
b@147 79 #print ["DEBUG file " + file_name + " doesn't exist yet - making new one"]
b@147 80 headerrow = sorted(fragmentnamelist) # sort alphabetically
b@147 81 headerrow.insert(0,'')
b@147 82 fragmentnamelist = fragmentnamelist[1:] #HACKY FIX inserting in firstrow also affects fragmentnamelist
b@147 83 with open(file_name, 'w') as writefile:
b@147 84 filewriter = csv.writer(writefile, delimiter=',')
b@147 85 filewriter.writerow(headerrow)
b@147 86
b@147 87 # open file to write for this page
b@147 88 writefile = open(file_name, 'a')
b@147 89 filewriter = csv.writer(writefile, delimiter=',')
b@147 90
b@147 91 # prepare row to be written for this subject for this page
b@147 92 ratingrow = [subject_id]
b@147 93
b@147 94 # get scores related to fragment [id]
b@147 95 for fragmentname in headerrow[1:]: # iterate over fragments in header (skip first empty column)
b@245 96 elementvalue = audioholder.find("./audioelement/[@id='"
b@147 97 + fragmentname
b@147 98 + "']/value")
b@147 99 if hasattr(elementvalue, 'text'): # if rating for this fragment exists
b@147 100 ratingrow.append(elementvalue.text) # add to rating row
b@147 101 else: # if this subject has not rated this fragment
b@147 102 ratingrow.append('') # append empty cell
b@147 103
b@147 104 # write row: [subject ID, rating fragment ID 1, ..., rating fragment ID M]
b@247 105 if any(ratingrow[1:]): # append to file if row non-empty (except subject name)
b@247 106 filewriter.writerow(ratingrow)
nicholas@150 107