annotate scripts/score_parser.py @ 1546:11218378feef

SMC Paper: increased XML size, condensed XML content and rest of paper.
author Brecht De Man <b.deman@qmul.ac.uk>
date Fri, 19 Jun 2015 12:21:05 +0100
parents 45363ee3632d
children cd20f076f6a3 a049c6cf7eb3
rev   line source
b@1543 1 import xml.etree.ElementTree as ET
b@1543 2 import os
b@1543 3 import csv
b@1543 4
b@1543 5 #TODO Remove DEBUG statements
b@1543 6
b@1543 7 # get every XML file in folder
b@1543 8 for file in os.listdir("."): # You have to put this in folder where output XML files are.
b@1543 9 if file.endswith(".xml"):
b@1543 10 tree = ET.parse(file)
b@1543 11 root = tree.getroot()
b@1543 12 #print ["DEBUG Reading " + file + "..."]
b@1543 13
b@1543 14 # get subject ID from XML file
b@1543 15 subject_id = file # file name as subject ID
b@1543 16
b@1543 17 # get list of all pages this subject evaluated
b@1543 18 for audioholder in root.findall("./audioholder"): # iterate over pages
b@1543 19 page_name = audioholder.get('id') # get page name
b@1543 20 #print ["DEBUG page " + page_name]
b@1543 21
b@1543 22 if page_name is None: # ignore 'empty' audio_holders
b@1543 23 break
b@1543 24
b@1543 25 file_name = 'ratings/'+page_name+'-ratings.csv' # score file name
b@1543 26
b@1543 27 # create folder 'ratings if not yet created
b@1543 28 if not os.path.exists('ratings'):
b@1543 29 os.makedirs('ratings')
b@1543 30
b@1543 31 # header: fragment IDs in 'alphabetical' order
b@1543 32 # go to fragment column, or create new column if it doesn't exist yet
b@1543 33
b@1543 34 # get array of audio elements and number of audio elements
b@1543 35 audiolist = root.findall("*/[@id='"+page_name+"']/audioelement")
b@1543 36 n_fragments = len(audiolist)
b@1543 37
b@1543 38 # get alphabetical array of fragment IDs from this subject's XML
b@1543 39 fragmentnamelist = [] # make empty list
b@1543 40 for audioelement in audiolist: # iterate over all audioelements
b@1543 41 fragmentnamelist.append(audioelement.get('id')) # add to list
b@1543 42
b@1543 43
b@1543 44 # if file exists, get header and add 'new' fragments
b@1543 45 if os.path.isfile(file_name):
b@1543 46 #print ["DEBUG file " + file_name + " already exists - reading header"]
b@1543 47 with open(file_name, 'r') as readfile:
b@1543 48 filereader = csv.reader(readfile, delimiter=',')
b@1543 49 headerrow = filereader.next()
b@1543 50 #headerrow = headerrow[1:] # remove first column (empty)
b@1543 51
b@1543 52 # Which of the fragmentes are in fragmentnamelist but not in headerrow?
b@1543 53 newfragments = list(set(fragmentnamelist)-set(headerrow))
b@1543 54 newfragments = sorted(newfragments) # new fragments in alphabetical order
b@1543 55 # If not empty, read file and rewrite adding extra columns
b@1543 56 if newfragments: # if not empty
b@1543 57 print ["DEBUG New fragments found: " + str(newfragments)]
b@1543 58 with open('temp.csv', 'w') as writefile:
b@1543 59 filewriter = csv.writer(writefile, delimiter=',')
b@1543 60 filewriter.writerow(headerrow + newfragments) # write new header
b@1543 61 for row in filereader: # rewrite row plus empty cells for every new fragment name
b@1543 62 #print ["DEBUG Old row: " + str(row)]
b@1543 63 filewriter.writerow(row + ['']*len(newfragments))
b@1543 64 #print ["DEBUG New row: " + str(row + ['']*len(newfragments))]
b@1543 65 os.rename('temp.csv', file_name) # replace old file with temp file
b@1543 66 headerrow = headerrow + newfragments
b@1543 67 print ["DEBUG New header row: " + str(headerrow)]
b@1543 68
b@1543 69 # if not, create file and make header
b@1543 70 else:
b@1543 71 #print ["DEBUG file " + file_name + " doesn't exist yet - making new one"]
b@1543 72 headerrow = sorted(fragmentnamelist) # sort alphabetically
b@1543 73 headerrow.insert(0,'')
b@1543 74 fragmentnamelist = fragmentnamelist[1:] #HACKY FIX inserting in firstrow also affects fragmentnamelist
b@1543 75 with open(file_name, 'w') as writefile:
b@1543 76 filewriter = csv.writer(writefile, delimiter=',')
b@1543 77 filewriter.writerow(headerrow)
b@1543 78
b@1543 79 # open file to write for this page
b@1543 80 writefile = open(file_name, 'a')
b@1543 81 filewriter = csv.writer(writefile, delimiter=',')
b@1543 82
b@1543 83 # prepare row to be written for this subject for this page
b@1543 84 ratingrow = [subject_id]
b@1543 85
b@1543 86 # get scores related to fragment [id]
b@1543 87 for fragmentname in headerrow[1:]: # iterate over fragments in header (skip first empty column)
b@1543 88 elementvalue = root.find("*/[@id='"
b@1543 89 + page_name
b@1543 90 + "']/audioelement/[@id='"
b@1543 91 + fragmentname
b@1543 92 + "']/value")
b@1543 93 if hasattr(elementvalue, 'text'): # if rating for this fragment exists
b@1543 94 ratingrow.append(elementvalue.text) # add to rating row
b@1543 95 else: # if this subject has not rated this fragment
b@1543 96 ratingrow.append('') # append empty cell
b@1543 97
b@1543 98 # write row: [subject ID, rating fragment ID 1, ..., rating fragment ID M]
b@1543 99 filewriter.writerow(ratingrow)
b@1543 100