annotate new/analysis/analysis.js @ 22:1f375b7d75fd tip

updated warning for breaks during test
author Giulio Moro <giuliomoro@yahoo.it>
date Fri, 13 May 2016 19:01:08 +0100
parents 853caf8cd74b
children
rev   line source
giuliomoro@15 1 /*
giuliomoro@15 2 * Analysis script for WAET
giuliomoro@15 3 */
giuliomoro@15 4
giuliomoro@15 5 // Firefox does not have an XMLDocument.prototype.getElementsByName
giuliomoro@15 6 // and there is no searchAll style command, this custom function will
giuliomoro@15 7 // search all children recusrively for the name. Used for XSD where all
giuliomoro@15 8 // element nodes must have a name and therefore can pull the schema node
giuliomoro@15 9 XMLDocument.prototype.getAllElementsByName = function(name)
giuliomoro@15 10 {
giuliomoro@15 11 name = String(name);
giuliomoro@15 12 var selected = this.documentElement.getAllElementsByName(name);
giuliomoro@15 13 return selected;
giuliomoro@15 14 }
giuliomoro@15 15
giuliomoro@15 16 Element.prototype.getAllElementsByName = function(name)
giuliomoro@15 17 {
giuliomoro@15 18 name = String(name);
giuliomoro@15 19 var selected = [];
giuliomoro@15 20 var node = this.firstElementChild;
giuliomoro@15 21 while(node != null)
giuliomoro@15 22 {
giuliomoro@15 23 if (node.getAttribute('name') == name)
giuliomoro@15 24 {
giuliomoro@15 25 selected.push(node);
giuliomoro@15 26 }
giuliomoro@15 27 if (node.childElementCount > 0)
giuliomoro@15 28 {
giuliomoro@15 29 selected = selected.concat(node.getAllElementsByName(name));
giuliomoro@15 30 }
giuliomoro@15 31 node = node.nextElementSibling;
giuliomoro@15 32 }
giuliomoro@15 33 return selected;
giuliomoro@15 34 }
giuliomoro@15 35
giuliomoro@15 36 XMLDocument.prototype.getAllElementsByTagName = function(name)
giuliomoro@15 37 {
giuliomoro@15 38 name = String(name);
giuliomoro@15 39 var selected = this.documentElement.getAllElementsByTagName(name);
giuliomoro@15 40 return selected;
giuliomoro@15 41 }
giuliomoro@15 42
giuliomoro@15 43 Element.prototype.getAllElementsByTagName = function(name)
giuliomoro@15 44 {
giuliomoro@15 45 name = String(name);
giuliomoro@15 46 var selected = [];
giuliomoro@15 47 var node = this.firstElementChild;
giuliomoro@15 48 while(node != null)
giuliomoro@15 49 {
giuliomoro@15 50 if (node.nodeName == name)
giuliomoro@15 51 {
giuliomoro@15 52 selected.push(node);
giuliomoro@15 53 }
giuliomoro@15 54 if (node.childElementCount > 0)
giuliomoro@15 55 {
giuliomoro@15 56 selected = selected.concat(node.getAllElementsByTagName(name));
giuliomoro@15 57 }
giuliomoro@15 58 node = node.nextElementSibling;
giuliomoro@15 59 }
giuliomoro@15 60 return selected;
giuliomoro@15 61 }
giuliomoro@15 62
giuliomoro@15 63 // Firefox does not have an XMLDocument.prototype.getElementsByName
giuliomoro@15 64 if (typeof XMLDocument.prototype.getElementsByName != "function") {
giuliomoro@15 65 XMLDocument.prototype.getElementsByName = function(name)
giuliomoro@15 66 {
giuliomoro@15 67 name = String(name);
giuliomoro@15 68 var node = this.documentElement.firstElementChild;
giuliomoro@15 69 var selected = [];
giuliomoro@15 70 while(node != null)
giuliomoro@15 71 {
giuliomoro@15 72 if (node.getAttribute('name') == name)
giuliomoro@15 73 {
giuliomoro@15 74 selected.push(node);
giuliomoro@15 75 }
giuliomoro@15 76 node = node.nextElementSibling;
giuliomoro@15 77 }
giuliomoro@15 78 return selected;
giuliomoro@15 79 }
giuliomoro@15 80 }
giuliomoro@15 81
giuliomoro@15 82 var chartContext, testData;
giuliomoro@15 83 window.onload = function() {
giuliomoro@15 84 // Load the Visualization API and the corechart package.
giuliomoro@15 85 google.charts.load('current', {'packages':['corechart']});
giuliomoro@15 86 chartContext = new Chart();
giuliomoro@15 87 testData = new Data();
giuliomoro@15 88 }
giuliomoro@15 89
giuliomoro@15 90 function get(url) {
giuliomoro@15 91 // Return a new promise.
giuliomoro@15 92 return new Promise(function(resolve, reject) {
giuliomoro@15 93 // Do the usual XHR stuff
giuliomoro@15 94 var req = new XMLHttpRequest();
giuliomoro@15 95 req.open('GET', url);
giuliomoro@15 96 req.onload = function() {
giuliomoro@15 97 // This is called even on 404 etc
giuliomoro@15 98 // so check the status
giuliomoro@15 99 if (req.status == 200) {
giuliomoro@15 100 // Resolve the promise with the response text
giuliomoro@15 101 resolve(req.response);
giuliomoro@15 102 }
giuliomoro@15 103 else {
giuliomoro@15 104 // Otherwise reject with the status text
giuliomoro@15 105 // which will hopefully be a meaningful error
giuliomoro@15 106 reject(Error(req.statusText));
giuliomoro@15 107 }
giuliomoro@15 108 };
giuliomoro@15 109
giuliomoro@15 110 // Handle network errors
giuliomoro@15 111 req.onerror = function() {
giuliomoro@15 112 reject(Error("Network Error"));
giuliomoro@15 113 };
giuliomoro@15 114
giuliomoro@15 115 // Make the request
giuliomoro@15 116 req.send();
giuliomoro@15 117 });
giuliomoro@15 118 }
giuliomoro@15 119
giuliomoro@15 120 function arrayMean(values) {
giuliomoro@15 121 var mean = 0;
giuliomoro@15 122 for (var value of values) {
giuliomoro@15 123 mean += value;
giuliomoro@15 124 }
giuliomoro@15 125 mean /= values.length;
giuliomoro@15 126 return mean;
giuliomoro@15 127 }
giuliomoro@15 128
giuliomoro@15 129 function percentile(values, p) {
giuliomoro@15 130 //http://web.stanford.edu/class/archive/anthsci/anthsci192/anthsci192.1064/handouts/calculating%20percentiles.pdf
giuliomoro@15 131 values.sort( function(a,b) {return a - b;} );
giuliomoro@15 132 // get ordinal rank
giuliomoro@15 133 var index = values.length*p/100;
giuliomoro@15 134 var k = Math.floor(index);
giuliomoro@15 135 if (k == index) {
giuliomoro@15 136 return values[k];
giuliomoro@15 137 } else {
giuliomoro@15 138 var f = index-k;
giuliomoro@15 139 var x_int = (1-f)*values[k]+f*values[k+1];
giuliomoro@15 140 return x_int;
giuliomoro@15 141 }
giuliomoro@15 142 }
giuliomoro@15 143
giuliomoro@15 144 function arrayMin(array) {
giuliomoro@15 145 // Return the minimum value of an array
giuliomoro@15 146 var min = array[0];
giuliomoro@15 147 for (var value of array) {
giuliomoro@15 148 if (value < min) {
giuliomoro@15 149 min = value;
giuliomoro@15 150 }
giuliomoro@15 151 }
giuliomoro@15 152 return min;
giuliomoro@15 153 }
giuliomoro@15 154
giuliomoro@15 155 function arrayMax(array) {
giuliomoro@15 156 // Return the minimum value of an array
giuliomoro@15 157 var max = array[0];
giuliomoro@15 158 for (var value of array) {
giuliomoro@15 159 if (value > max) {
giuliomoro@15 160 max = value;
giuliomoro@15 161 }
giuliomoro@15 162 }
giuliomoro@15 163 return max;
giuliomoro@15 164 }
giuliomoro@15 165
giuliomoro@15 166 function boxplotRow(array) {
giuliomoro@15 167 // Take an array of element values and return array of computed intervals
giuliomoro@15 168 var result = {
giuliomoro@15 169 median : percentile(array,50),
giuliomoro@15 170 pct25 : percentile(array,25),
giuliomoro@15 171 pct75 : percentile(array,75),
giuliomoro@15 172 IQR : null,
giuliomoro@15 173 min: null,
giuliomoro@15 174 max: null,
giuliomoro@15 175 outliers: new Array()
giuliomoro@15 176 }
giuliomoro@15 177 result.IQR = result.pct75-result.pct25;
giuliomoro@15 178 var rest = [];
giuliomoro@15 179 var pct75_IQR = result.pct75+1.5*result.IQR;
giuliomoro@15 180 var pct25_IQR = result.pct25-1.5*result.IQR;
giuliomoro@15 181 for (var i=0; i<array.length; i++) {
giuliomoro@15 182 //outliers, ranger above pct75+1.5*IQR or below pct25-1.5*IQR
giuliomoro@15 183 var point = array[i];
giuliomoro@15 184 if (point > pct75_IQR || point < pct25_IQR) {
giuliomoro@15 185 result.outliers.push(point);
giuliomoro@15 186 } else {
giuliomoro@15 187 rest.push(point);
giuliomoro@15 188 }
giuliomoro@15 189 }
giuliomoro@15 190 result.max = arrayMax(rest);
giuliomoro@15 191 result.min = arrayMin(rest);
giuliomoro@15 192 return result;
giuliomoro@15 193
giuliomoro@15 194 }
giuliomoro@15 195
giuliomoro@15 196 function arrayHistogram(values,steps,min,max) {
giuliomoro@15 197 if (steps == undefined) {
giuliomoro@15 198 steps = 0.25;
giuliomoro@15 199 console.log("Warning: arrayHistogram called without steps size set, default to 0.25");
giuliomoro@15 200 }
giuliomoro@15 201 if (min == undefined) {min = arrayMin(values);}
giuliomoro@15 202 if (max == undefined) {max = arrayMax(values);}
giuliomoro@15 203 var histogram = [];
giuliomoro@15 204 var index = min;
giuliomoro@15 205 while(index < max) {
giuliomoro@15 206 histogram.push({
giuliomoro@15 207 marker: index,
giuliomoro@15 208 lt: index,
giuliomoro@15 209 rt: index+steps,
giuliomoro@15 210 count: 0
giuliomoro@15 211 });
giuliomoro@15 212 index += steps;
giuliomoro@15 213 }
giuliomoro@15 214 for (var value of values) {
giuliomoro@15 215 for (var entry of histogram) {
giuliomoro@15 216 if (value >= entry.lt && value <= entry.rt) {
giuliomoro@15 217 entry.count++;
giuliomoro@15 218 break;
giuliomoro@15 219 }
giuliomoro@15 220 }
giuliomoro@15 221 }
giuliomoro@15 222 return histogram;
giuliomoro@15 223 }
giuliomoro@15 224
giuliomoro@15 225 function Chart() {
giuliomoro@15 226 this.valueData;
giuliomoro@15 227 this.charts = [];
giuliomoro@15 228
giuliomoro@15 229 this.chartObject = function(name) {
giuliomoro@15 230 // Create the charting object
giuliomoro@15 231 this.name = name;
giuliomoro@15 232 this.root = document.createElement("div");
giuliomoro@15 233 this.root.className = "chart-holder";
giuliomoro@15 234 this.root.setAttribute("name",name);
giuliomoro@15 235 this.chartDOM = document.createElement("div");
giuliomoro@15 236 this.tableDOM = document.createElement("div");
giuliomoro@15 237 this.latexDOM = document.createElement("div");
giuliomoro@15 238 this.downloadDOM = document.createElement("div");
giuliomoro@15 239 this.chart = undefined;
giuliomoro@15 240 this.data = new google.visualization.DataTable();
giuliomoro@15 241 this.options = {};
giuliomoro@15 242 this.print = document.createElement("button");
giuliomoro@15 243 this.sortDataButton = document.createElement("button");
giuliomoro@15 244 this.sortDataButton.textContent = "Sort by Data";
giuliomoro@15 245 this.sortDataButton.addEventListener("click",this);
giuliomoro@15 246 this.sortDataButton.setAttribute("name","sort-data");
giuliomoro@15 247 this.sortNameButton = document.createElement("button");
giuliomoro@15 248 this.sortNameButton.textContent = "Sort by Name";
giuliomoro@15 249 this.sortNameButton.addEventListener("click",this);
giuliomoro@15 250 this.sortNameButton.setAttribute("name","sort-name");
giuliomoro@15 251 this.draw = function() {
giuliomoro@15 252 if (this.chart == undefined) {return;}
giuliomoro@15 253 this.tableDOM.innerHTML = null;
giuliomoro@15 254 this.latexDOM.innerHTML = null;
giuliomoro@15 255 this.buildTable();
giuliomoro@15 256 this.writeLatex();
giuliomoro@15 257 this.chart.draw(this.data,this.options);
giuliomoro@15 258 }
giuliomoro@15 259 this.sortData = function() {
giuliomoro@15 260 this.data.sort(1);
giuliomoro@15 261 }
giuliomoro@15 262 this.sortName = function() {
giuliomoro@15 263 this.data.sort(0);
giuliomoro@15 264 }
giuliomoro@15 265 this.handleEvent = function() {
giuliomoro@15 266 // Only used to handle the chart.event.addListener(this,'ready') callback
giuliomoro@15 267 switch(event.currentTarget.getAttribute("name"))
giuliomoro@15 268 {
giuliomoro@15 269 case "download":
giuliomoro@15 270 window.open(this.chart.getImageURI());
giuliomoro@15 271 break;
giuliomoro@15 272 case "sort-data":
giuliomoro@15 273 this.sortData();
giuliomoro@15 274 this.draw();
giuliomoro@15 275 break;
giuliomoro@15 276 case "sort-name":
giuliomoro@15 277 this.sortName();
giuliomoro@15 278 this.draw();
giuliomoro@15 279 break;
giuliomoro@15 280 }
giuliomoro@15 281 }
giuliomoro@15 282
giuliomoro@15 283 this.root.appendChild(this.chartDOM);
giuliomoro@15 284 this.root.appendChild(this.tableDOM);
giuliomoro@15 285 this.root.appendChild(this.latexDOM);
giuliomoro@15 286 this.root.appendChild(this.sortDataButton);
giuliomoro@15 287 this.root.appendChild(this.sortNameButton);
giuliomoro@15 288 this.root.appendChild(this.print);
giuliomoro@15 289 this.print.textContent = "Download";
giuliomoro@15 290 this.print.setAttribute("name","download");
giuliomoro@15 291 this.print.addEventListener("click",this);
giuliomoro@15 292 this.root.appendChild(this.downloadDOM);
giuliomoro@15 293 this.buildTable = function() {
giuliomoro@15 294 var table = document.createElement("table");
giuliomoro@15 295 table.border = "1";
giuliomoro@15 296 var numRows = this.data.getNumberOfRows();
giuliomoro@15 297 var numColumns = this.data.getNumberOfColumns();
giuliomoro@15 298 for (var columnIndex=0; columnIndex<numColumns; columnIndex++)
giuliomoro@15 299 {
giuliomoro@15 300 var tableTitle = this.data.getColumnLabel(columnIndex);
giuliomoro@15 301 if (tableTitle != "") {
giuliomoro@15 302 var table_row = document.createElement('tr');
giuliomoro@15 303 table.appendChild(table_row);
giuliomoro@15 304 var row_title = document.createElement('td');
giuliomoro@15 305 table_row.appendChild(row_title);
giuliomoro@15 306 row_title.textContent = tableTitle;
giuliomoro@15 307 for (var rowIndex=0; rowIndex<numRows; rowIndex++)
giuliomoro@15 308 {
giuliomoro@15 309 var row_entry = document.createElement('td');
giuliomoro@15 310 table_row.appendChild(row_entry);
giuliomoro@15 311 var entry = this.data.getValue(rowIndex,columnIndex);
giuliomoro@15 312 if (isFinite(Number(entry)))
giuliomoro@15 313 {
giuliomoro@15 314 entry = String(Number(entry).toFixed(4));
giuliomoro@15 315 }
giuliomoro@15 316 row_entry.textContent = entry;
giuliomoro@15 317 }
giuliomoro@15 318 }
giuliomoro@15 319 }
giuliomoro@15 320 this.tableDOM.appendChild(table);
giuliomoro@15 321 };
giuliomoro@15 322 this.writeLatex = function() {
giuliomoro@15 323 var numRows = this.data.getNumberOfRows();
giuliomoro@15 324 var numColumns = this.data.getNumberOfColumns();
giuliomoro@15 325 var root = document.createElement("div");
giuliomoro@15 326 root.className = "code";
giuliomoro@15 327 var holder = document.createElement("pre");
giuliomoro@15 328 // Table start
giuliomoro@15 329 var start = document.createElement("p");
giuliomoro@15 330 start.textContent = "\\" + "begin{tabular}{|l|";
giuliomoro@15 331 holder.appendChild(start);
giuliomoro@15 332 for (var i=0; i<numRows; i++) {
giuliomoro@15 333 start.textContent = start.textContent+"c|";
giuliomoro@15 334 }
giuliomoro@15 335 start.textContent = start.textContent.concat("}");
giuliomoro@15 336 // Now write the rows:
giuliomoro@15 337 for (var rIndex=0; rIndex<numColumns; rIndex++) {
giuliomoro@15 338 var tableTitle = this.data.getColumnLabel(rIndex);
giuliomoro@15 339 if(tableTitle != "")
giuliomoro@15 340 {
giuliomoro@15 341 var row = document.createElement("p");
giuliomoro@15 342 row.textContent = tableTitle.concat(" & ");
giuliomoro@15 343 for (var cIndex=0; cIndex<numRows; cIndex++) {
giuliomoro@15 344 var entry = this.data.getValue(cIndex,rIndex);
giuliomoro@15 345 if (isFinite(Number(entry)))
giuliomoro@15 346 {
giuliomoro@15 347 entry = String(Number(entry).toFixed(4));
giuliomoro@15 348 }
giuliomoro@15 349 row.textContent = row.textContent.concat(entry);
giuliomoro@15 350 if (cIndex < numRows-1) {
giuliomoro@15 351 row.textContent = row.textContent.concat(" & ");
giuliomoro@15 352 } else {
giuliomoro@15 353 row.textContent = row.textContent.concat(" \\\\ \\hline");
giuliomoro@15 354 }
giuliomoro@15 355 }
giuliomoro@15 356 holder.appendChild(row);
giuliomoro@15 357 }
giuliomoro@15 358 }
giuliomoro@15 359 // Table end
giuliomoro@15 360 var end = document.createElement("p");
giuliomoro@15 361 end.textContent = "\\" + "end{tabular}";
giuliomoro@15 362 holder.appendChild(end);
giuliomoro@15 363 root.appendChild(holder);
giuliomoro@15 364 this.latexDOM.appendChild(root);
giuliomoro@15 365 }
giuliomoro@15 366 }
giuliomoro@15 367
giuliomoro@15 368 this.clear = function() {
giuliomoro@15 369 var inject = document.getElementById("test-pages");
giuliomoro@15 370 for (var chart of this.charts) {
giuliomoro@15 371 inject.removeChild(chart.root);
giuliomoro@15 372 }
giuliomoro@15 373 this.charts = [];
giuliomoro@15 374 }
giuliomoro@15 375
giuliomoro@15 376 this.drawTestMean = function() {
giuliomoro@15 377 // This draws one bargraph per axis with every test element on
giuliomoro@15 378 if (this.valueData == null) {
giuliomoro@15 379 console.log("Error - Data not loaded");
giuliomoro@15 380 return;
giuliomoro@15 381 }
giuliomoro@15 382 var chartList = [];
giuliomoro@15 383
giuliomoro@15 384 // Create the data table
giuliomoro@15 385 for (var page of this.valueData.pages) {
giuliomoro@15 386 for (var element of page.elements) {
giuliomoro@15 387 for (var axis of element.axis) {
giuliomoro@15 388 // Find the axis
giuliomoro@15 389 var axisChart = chartList.find(function(element,index,array){
giuliomoro@15 390 if (element.name == this) {return true;} else {return false;}
giuliomoro@15 391 },"mean-test-"+axis.name);
giuliomoro@15 392 if (axisChart == null) {
giuliomoro@15 393 axisChart = new this.chartObject("mean-test-"+axis.name);
giuliomoro@15 394 axisChart.options = {
giuliomoro@15 395 'title':'Mean of axis: '+axis.name,
giuliomoro@15 396 'width':window.innerWidth*0.9,
giuliomoro@15 397 'height':(window.innerWidth*0.9)/1.77
giuliomoro@15 398 }
giuliomoro@15 399 axisChart.data.addColumn('string','id');
giuliomoro@15 400 axisChart.data.addColumn('number',axis.name);
giuliomoro@15 401 chartList.push(axisChart);
giuliomoro@15 402 document.getElementById("test-pages").appendChild(axisChart.root);
giuliomoro@15 403 }
giuliomoro@15 404 var mean = arrayMean(axis.values);
giuliomoro@15 405 axisChart.data.addRow([element.id,mean]);
giuliomoro@15 406 }
giuliomoro@15 407 }
giuliomoro@15 408 }
giuliomoro@15 409
giuliomoro@15 410 // Build and push charts
giuliomoro@15 411 for (var chart of chartList) {
giuliomoro@15 412 chart.chart = new google.visualization.ColumnChart(chart.chartDOM);
giuliomoro@15 413 chart.chart.draw(chart.data,chart.options);
giuliomoro@15 414 chart.buildTable();
giuliomoro@15 415 chart.writeLatex();
giuliomoro@15 416 this.charts.push(chart);
giuliomoro@15 417 }
giuliomoro@15 418 }
giuliomoro@15 419
giuliomoro@15 420 this.drawTestBoxplot = function() {
giuliomoro@15 421 if (this.valueData == null) {
giuliomoro@15 422 console.log("Error - Data not loaded");
giuliomoro@15 423 return;
giuliomoro@15 424 }
giuliomoro@15 425 var chartList = [];
giuliomoro@15 426
giuliomoro@15 427 // Creates one chart per axis
giuliomoro@15 428
giuliomoro@15 429 // Create the data table
giuliomoro@15 430 for (var page of this.valueData.pages) {
giuliomoro@15 431 for (var element of page.elements) {
giuliomoro@15 432 for (var axis of element.axis) {
giuliomoro@15 433 // Find the axis
giuliomoro@15 434 var axisChart = chartList.find(function(element,index,array){
giuliomoro@15 435 if (element.name == this) {return true;} else {return false;}
giuliomoro@15 436 },"boxplot-test-"+axis.name);
giuliomoro@15 437 if (axisChart == null) {
giuliomoro@15 438 // Axis chart doesn't exist
giuliomoro@15 439 axisChart = new this.chartObject("boxplot-test-"+axis.name);
giuliomoro@15 440 axisChart.options = {
giuliomoro@15 441 'title':'Boxplot of axis '+axis.name,
giuliomoro@15 442 'width':window.innerWidth*0.9,
giuliomoro@15 443 'height':(window.innerWidth*0.9)/1.77,
giuliomoro@15 444 legend: {position: 'none'},
giuliomoro@15 445 lineWidth: 0,
giuliomoro@15 446 series: [{'color': '#D3362D'}],
giuliomoro@15 447 intervals: {
giuliomoro@15 448 barWidth: 1,
giuliomoro@15 449 boxWidth: 1,
giuliomoro@15 450 lineWidth: 2,
giuliomoro@15 451 style: 'boxes'
giuliomoro@15 452 },
giuliomoro@15 453 interval: {
giuliomoro@15 454 max: {
giuliomoro@15 455 style: 'bars',
giuliomoro@15 456 fillOpacity: 1,
giuliomoro@15 457 color: '#777'
giuliomoro@15 458 },
giuliomoro@15 459 min: {
giuliomoro@15 460 style: 'bars',
giuliomoro@15 461 fillOpacity: 1,
giuliomoro@15 462 color: '#777'
giuliomoro@15 463 }
giuliomoro@15 464 }
giuliomoro@15 465 };
giuliomoro@15 466 axisChart.data.addColumn('string','id');
giuliomoro@15 467 axisChart.data.addColumn('number','median');
giuliomoro@15 468 axisChart.data.addColumn({id:'max',type:'number',role:'interval'});
giuliomoro@15 469 axisChart.data.addColumn({id:'min',type:'number',role:'interval'});
giuliomoro@15 470 axisChart.data.addColumn({id:'firstQuartile',type:'number',role:'interval'});
giuliomoro@15 471 axisChart.data.addColumn({id:'median',type:'number',role:'interval'});
giuliomoro@15 472 axisChart.data.addColumn({id:'thirdQuartile',type:'number',role:'interval'});
giuliomoro@15 473 chartList.push(axisChart);
giuliomoro@15 474 document.getElementById("test-pages").appendChild(axisChart.root);
giuliomoro@15 475 }
giuliomoro@15 476 var result = boxplotRow(axis.values);
giuliomoro@15 477 axisChart.data.addRow([element.id,result.median,result.max,result.min,result.pct25,result.median,result.pct75]);
giuliomoro@15 478 }
giuliomoro@15 479 }
giuliomoro@15 480 }
giuliomoro@15 481 // Build and push charts
giuliomoro@15 482 for (var chart of chartList) {
giuliomoro@15 483 chart.chart = new google.visualization.LineChart(chart.chartDOM);
giuliomoro@15 484 chart.chart.draw(chart.data,chart.options);
giuliomoro@15 485 chart.buildTable();
giuliomoro@15 486 chart.writeLatex();
giuliomoro@15 487 this.charts.push(chart);
giuliomoro@15 488 }
giuliomoro@15 489 }
giuliomoro@15 490
giuliomoro@15 491 this.drawPageMean = function() {
giuliomoro@15 492 // First we must get the value data
giuliomoro@15 493 if (this.valueData == null) {
giuliomoro@15 494 console.log("Error - Data not loaded");
giuliomoro@15 495 return;
giuliomoro@15 496 }
giuliomoro@15 497 // We create one plot per page
giuliomoro@15 498 for (var page of this.valueData.pages) {
giuliomoro@15 499
giuliomoro@15 500 // Create the chart resulting point
giuliomoro@15 501 var chart = new this.chartObject("mean-page-"+page.id);
giuliomoro@15 502 document.getElementById("test-pages").appendChild(chart.root);
giuliomoro@15 503
giuliomoro@15 504 // Create the data table
giuliomoro@15 505 chart.data.addColumn('string','id');
giuliomoro@15 506 // Get axis labels
giuliomoro@15 507 for (var axis of page.elements[0].axis) {
giuliomoro@15 508 chart.data.addColumn('number',axis.name);
giuliomoro@15 509 }
giuliomoro@15 510 var rows = []; // Rows is an array of tuples [col1, col2, col3 ... colN];
giuliomoro@15 511 for (var element of page.elements) {
giuliomoro@15 512 var entry = [element.id];
giuliomoro@15 513 for (var i=0; i<page.elements[0].axis.length; i++) {
giuliomoro@15 514 var mean =0;
giuliomoro@15 515 if (i < element.axis.length) {
giuliomoro@15 516 var axis = element.axis[i];
giuliomoro@15 517 mean = arrayMean(axis.values);
giuliomoro@15 518 }
giuliomoro@15 519 entry.push(mean);
giuliomoro@15 520 }
giuliomoro@15 521 rows.push(entry);
giuliomoro@15 522 }
giuliomoro@15 523 chart.data.addRows(rows);
giuliomoro@15 524 chart.options = {
giuliomoro@15 525 'title':'Mean of page: '+page.id,
giuliomoro@15 526 'width':800,
giuliomoro@15 527 'height':700
giuliomoro@15 528 }
giuliomoro@15 529 // Draw the chart
giuliomoro@15 530 chart.chart = new google.visualization.ColumnChart(chart.chartDOM);
giuliomoro@15 531 chart.chart.draw(chart.data,chart.options);
giuliomoro@15 532 chart.buildTable();
giuliomoro@15 533 chart.writeLatex();
giuliomoro@15 534 this.charts.push(chart);
giuliomoro@15 535 }
giuliomoro@15 536 }
giuliomoro@15 537
giuliomoro@15 538 this.drawElementHistogram = function() {
giuliomoro@15 539 // First we must get the value data
giuliomoro@15 540 if (this.valueData == null) {
giuliomoro@15 541 console.log("Error - Data not loaded");
giuliomoro@15 542 return;
giuliomoro@15 543 }
giuliomoro@15 544 // We create one plot per element, enjoy...
giuliomoro@15 545 for (var page of this.valueData.pages) {
giuliomoro@15 546 for (var element of page.elements) {
giuliomoro@15 547 // Build the chart object
giuliomoro@15 548 var chart = new this.chartObject("histogram-element-"+element.id);
giuliomoro@15 549 document.getElementById("test-pages").appendChild(chart.root);
giuliomoro@15 550 chart.data.addColumn('string','index');
giuliomoro@15 551 var histograms = [];
giuliomoro@15 552 for (var axis of element.axis) {
giuliomoro@15 553 chart.data.addColumn('number',axis.name);
giuliomoro@15 554 histograms.push(arrayHistogram(axis.values,0.125,0.0,1.0));
giuliomoro@15 555 }
giuliomoro@15 556 for (var axis of element.axis) {
giuliomoro@15 557 for (var i=0; i<histograms[0].length; i++)
giuliomoro@15 558 {
giuliomoro@15 559 var entry = [""+histograms[0][i].lt.toPrecision(2)+"-"+histograms[0][i].rt.toPrecision(3)]
giuliomoro@15 560 for (var histogram of histograms) {
giuliomoro@15 561 entry.push(histogram[i].count);
giuliomoro@15 562 }
giuliomoro@15 563 chart.data.addRow(entry);
giuliomoro@15 564 }
giuliomoro@15 565 }
giuliomoro@15 566 chart.options = {
giuliomoro@15 567 'title':'Histogram of element: '+element.id,
giuliomoro@15 568 'width':800,
giuliomoro@15 569 'height':700,
giuliomoro@15 570 'bar':{'groupWidth': '100%'}
giuliomoro@15 571 }
giuliomoro@15 572 // Draw the chart
giuliomoro@15 573 chart.chart = new google.visualization.ColumnChart(chart.chartDOM);
giuliomoro@15 574 chart.chart.draw(chart.data,chart.options);
giuliomoro@15 575 chart.buildTable();
giuliomoro@15 576 chart.writeLatex();
giuliomoro@15 577 this.charts.push(chart);
giuliomoro@15 578 }
giuliomoro@15 579 }
giuliomoro@15 580 }
giuliomoro@15 581 }
giuliomoro@15 582
giuliomoro@15 583 function Data() {
giuliomoro@15 584 // This holds the link between the server side calculations and the client side visualisation of the data
giuliomoro@15 585
giuliomoro@15 586 // Dynamically generate the test filtering / page filterting tools
giuliomoro@15 587 var self = this;
giuliomoro@15 588 // Collect the test types and counts
giuliomoro@15 589 this.testSavedDiv = document.getElementById("test-saved");
giuliomoro@15 590 this.testSaves = null;
giuliomoro@15 591 this.selectURL = null;
giuliomoro@15 592
giuliomoro@15 593 this.specification = new Specification();
giuliomoro@15 594 get("../xml/test-schema.xsd").then(function(response){
giuliomoro@15 595 var parse = new DOMParser();
giuliomoro@15 596 self.specification.schema = parse.parseFromString(response,'text/xml');
giuliomoro@15 597 },function(error){
giuliomoro@15 598 console.log("ERROR: Could not get Test Schema");
giuliomoro@15 599 });
giuliomoro@15 600 this.update = function(url) {
giuliomoro@15 601 var self = this;
giuliomoro@15 602 }
giuliomoro@15 603
giuliomoro@15 604 this.updateData = function(req_str) {
giuliomoro@15 605 // Now go get that data
giuliomoro@15 606 get(req_str).then(function(response){
giuliomoro@15 607 // Returns the data
giuliomoro@15 608 chartContext.valueData = JSON.parse(response);
giuliomoro@15 609 },function(error){console.error(error);});
giuliomoro@15 610 }
giuliomoro@15 611 }
giuliomoro@15 612
giuliomoro@15 613 var interfaceContext = new function() {
giuliomoro@15 614 // This creates the interface for the user to connect with the dynamic back-end to retrieve data
giuliomoro@15 615 this.rootDOM = document.createElement("div");
giuliomoro@15 616 this.getDataButton = {
giuliomoro@15 617 button: document.createElement("button"),
giuliomoro@15 618 parent: this,
giuliomoro@15 619 handleEvent: function(event) {
giuliomoro@15 620 // Get the list of files:
giuliomoro@15 621 var req_str = "../php/get_filtered_score.php"+this.parent.getFilterString();
giuliomoro@15 622 testData.updateData(req_str);
giuliomoro@15 623 }
giuliomoro@15 624 }
giuliomoro@15 625 this.getDataButton.button.textContent = "Get Filtered Data";
giuliomoro@15 626 this.getDataButton.button.addEventListener("click",this.getDataButton);
giuliomoro@15 627
giuliomoro@15 628 this.getRawScoreData = {
giuliomoro@15 629 root: document.createElement("div"),
giuliomoro@15 630 csvDOM: document.createElement("button"),
giuliomoro@15 631 jsonDOM: document.createElement("button"),
giuliomoro@15 632 xmlDOM: document.createElement("button"),
giuliomoro@15 633 presentDOM: document.createElement("div"),
giuliomoro@15 634 parent: this,
giuliomoro@15 635 XHR: new XMLHttpRequest(),
giuliomoro@15 636 handleEvent: function(event) {
giuliomoro@15 637 this.presentDOM.innerHTML = null;
giuliomoro@15 638 var url = "../php/get_filtered_score.php"+this.parent.getFilterString();
giuliomoro@15 639 this.XHR.open("GET",url+"&format="+event.currentTarget.textContent,true);
giuliomoro@15 640 switch(event.currentTarget.textContent) {
giuliomoro@15 641 case "CSV":
giuliomoro@15 642 this.XHR.onload = function() {
giuliomoro@15 643 var file = [this.response];
giuliomoro@15 644 var bb = new Blob(file,{type: 'text/csv'});
giuliomoro@15 645 this.parent.presentDOM.appendChild( this.parent.generateLink(bb,"scores.csv") );
giuliomoro@15 646 }
giuliomoro@15 647 break;
giuliomoro@15 648 case "JSON":
giuliomoro@15 649 this.XHR.onload = function() {
giuliomoro@15 650 var file = [this.response];
giuliomoro@15 651 var bb = new Blob(file,{type: 'application/json'});
giuliomoro@15 652 this.parent.presentDOM.appendChild( this.parent.generateLink(bb,"scores.json") );
giuliomoro@15 653 }
giuliomoro@15 654 break;
giuliomoro@15 655 case "XML":
giuliomoro@15 656 this.XHR.onload = function() {
giuliomoro@15 657 var file = [this.response];
giuliomoro@15 658 var bb = new Blob(file,{type: 'text/xml'});
giuliomoro@15 659 this.parent.presentDOM.appendChild( this.parent.generateLink(bb,"scores.xml") );
giuliomoro@15 660 }
giuliomoro@15 661 break;
giuliomoro@15 662 }
giuliomoro@15 663 this.XHR.send();
giuliomoro@15 664 },
giuliomoro@15 665 generateLink: function(blob,filename) {
giuliomoro@15 666 var dnlk = window.URL.createObjectURL(blob);
giuliomoro@15 667 var a = document.createElement("a");
giuliomoro@15 668 a.hidden = '';
giuliomoro@15 669 a.href = dnlk;
giuliomoro@15 670 a.download = filename;
giuliomoro@15 671 a.textContent = "Save File";
giuliomoro@15 672 return a;
giuliomoro@15 673 }
giuliomoro@15 674 }
giuliomoro@15 675
giuliomoro@15 676 this.getRawScoreData.root.appendChild(this.getRawScoreData.csvDOM);
giuliomoro@15 677 this.getRawScoreData.root.appendChild(this.getRawScoreData.jsonDOM);
giuliomoro@15 678 this.getRawScoreData.root.appendChild(this.getRawScoreData.xmlDOM);
giuliomoro@15 679 this.getRawScoreData.root.appendChild(this.getRawScoreData.presentDOM);
giuliomoro@15 680 this.getRawScoreData.XHR.parent = this.getRawScoreData;
giuliomoro@15 681 this.getRawScoreData.csvDOM.textContent = 'CSV';
giuliomoro@15 682 this.getRawScoreData.csvDOM.addEventListener('click',this.getRawScoreData);
giuliomoro@15 683 this.getRawScoreData.jsonDOM.textContent = 'JSON';
giuliomoro@15 684 this.getRawScoreData.jsonDOM.addEventListener('click',this.getRawScoreData);
giuliomoro@15 685 this.getRawScoreData.xmlDOM.textContent = 'XML';
giuliomoro@15 686 this.getRawScoreData.xmlDOM.addEventListener('click',this.getRawScoreData);
giuliomoro@15 687
giuliomoro@15 688 this.testSaves = {
giuliomoro@15 689 json: null,
giuliomoro@15 690 selectedURL: null,
giuliomoro@15 691 inputs: [],
giuliomoro@15 692 parent: this
giuliomoro@15 693 };
giuliomoro@15 694 this.init = function() {
giuliomoro@15 695 var self = this;
giuliomoro@15 696 get('../php/get_tests.php?format=JSON').then(function(response){
giuliomoro@15 697 document.getElementById("test-saved").innerHTML = null;
giuliomoro@15 698 var table = document.createElement("table");
giuliomoro@15 699 table.innerHTML = "<tr><td>Test Filename</td><td>Count</td><td>Include</td></tr>";
giuliomoro@15 700 self.testSaves.json = JSON.parse(response);
giuliomoro@15 701 for (var test of self.testSaves.json.tests) {
giuliomoro@15 702 var tableRow = document.createElement("tr");
giuliomoro@15 703 var tableRowFilename = document.createElement("td");
giuliomoro@15 704 tableRowFilename.textContent = test.testName;
giuliomoro@15 705 var tableRowCount = document.createElement("td");
giuliomoro@15 706 tableRowCount.textContent = test.files.length;
giuliomoro@15 707 tableRow.appendChild(tableRowFilename);
giuliomoro@15 708 tableRow.appendChild(tableRowCount);
giuliomoro@15 709 var tableRowInclude = document.createElement("td");
giuliomoro@15 710 var obj = {
giuliomoro@15 711 root: document.createElement("input"),
giuliomoro@15 712 parent: self.testSaves,
giuliomoro@15 713 handleEvent: function(event) {
giuliomoro@15 714 this.parent.selectedURL = event.currentTarget.getAttribute("source");
giuliomoro@15 715 var self = this;
giuliomoro@15 716 get(this.parent.selectedURL).then(function(response){
giuliomoro@15 717 var parse = new DOMParser();
giuliomoro@15 718 testData.specification.decode(parse.parseFromString(response,'text/xml'));
giuliomoro@15 719 self.parent.parent.generateFilters(testData.specification);
giuliomoro@15 720 self.parent.parent.getFileCount();
giuliomoro@15 721 return true;
giuliomoro@15 722 },function(error){
giuliomoro@15 723 console.log("ERROR: Could not get"+url);
giuliomoro@15 724 return false;
giuliomoro@15 725 });
giuliomoro@15 726 }
giuliomoro@15 727 }
giuliomoro@15 728 obj.root.type = "radio";
giuliomoro@15 729 obj.root.name = "test-include";
giuliomoro@15 730 obj.root.setAttribute("source",test.testName);
giuliomoro@15 731 obj.root.addEventListener("change",obj);
giuliomoro@15 732 tableRowInclude.appendChild(obj.root);
giuliomoro@15 733 tableRow.appendChild(tableRowInclude);
giuliomoro@15 734 table.appendChild(tableRow);
giuliomoro@15 735 self.testSaves.inputs.push(obj);
giuliomoro@15 736 }
giuliomoro@15 737 document.getElementById("test-saved").appendChild(table);
giuliomoro@15 738 },function(error){console.error(error);});
giuliomoro@15 739 }
giuliomoro@15 740
giuliomoro@15 741 this.filterDOM = document.createElement("div");
giuliomoro@15 742 this.filterDOM.innerHTML = "<p>PreTest Filters</p><div id='filter-count'></div>";
giuliomoro@15 743 this.filterObjects = [];
giuliomoro@15 744 this.generateFilters = function(specification) {
giuliomoro@15 745 // Filters are based on the pre and post global surverys
giuliomoro@15 746 var FilterObject = function(parent,specification) {
giuliomoro@15 747 this.parent = parent;
giuliomoro@15 748 this.specification = specification;
giuliomoro@15 749 this.rootDOM = document.createElement("div");
giuliomoro@15 750 this.rootDOM.innerHTML = "<span>ID: "+specification.id+", Type: "+specification.type+"</span>";
giuliomoro@15 751 this.rootDOM.className = "filter-entry";
giuliomoro@15 752 this.handleEvent = function(event) {
giuliomoro@15 753 switch(this.specification.type) {
giuliomoro@15 754 case "number":
giuliomoro@15 755 var name = event.currentTarget.name;
giuliomoro@15 756 eval("this."+name+" = event.currentTarget.value");
giuliomoro@15 757 break;
giuliomoro@15 758 case "checkbox":
giuliomoro@15 759 break;
giuliomoro@15 760 case "radio":
giuliomoro@15 761 break;
giuliomoro@15 762 }
giuliomoro@15 763 this.parent.getFileCount();
giuliomoro@15 764 }
giuliomoro@15 765 this.getFilterPairs = function() {
giuliomoro@15 766 var pairs = [];
giuliomoro@15 767 switch(this.specification.type) {
giuliomoro@15 768 case "number":
giuliomoro@15 769 if (this.min != "") {
giuliomoro@15 770 pairs.push([specification.id+"-min",this.min]);
giuliomoro@15 771 }
giuliomoro@15 772 if (this.max != "") {
giuliomoro@15 773 pairs.push([specification.id+"-max",this.max]);
giuliomoro@15 774 }
giuliomoro@15 775 break;
giuliomoro@15 776 case "radio":
giuliomoro@15 777 case "checkbox":
giuliomoro@15 778 for (var i=0; i<this.options.length; i++) {
giuliomoro@15 779 if (!this.options[i].checked) {
giuliomoro@15 780 pairs.push([specification.id+"-exclude-"+i,specification.options[i].name]);
giuliomoro@15 781 }
giuliomoro@15 782 }
giuliomoro@15 783 break;
giuliomoro@15 784 }
giuliomoro@15 785 return pairs;
giuliomoro@15 786 }
giuliomoro@15 787 switch(specification.type) {
giuliomoro@15 788 case "number":
giuliomoro@15 789 // Number can be ranged by min/max levels
giuliomoro@15 790 this.min = "";
giuliomoro@15 791 this.max = "";
giuliomoro@15 792 this.minDOM = document.createElement("input");
giuliomoro@15 793 this.minDOM.type = "number";
giuliomoro@15 794 this.minDOM.name = "min";
giuliomoro@15 795 this.minDOM.addEventListener("change",this);
giuliomoro@15 796 this.minDOMText = document.createElement("span");
giuliomoro@15 797 this.minDOMText.textContent = "Minimum: ";
giuliomoro@15 798 var pairHolder = document.createElement("div");
giuliomoro@15 799 pairHolder.appendChild(this.minDOMText);
giuliomoro@15 800 pairHolder.appendChild(this.minDOM);
giuliomoro@15 801 this.rootDOM.appendChild(pairHolder);
giuliomoro@15 802
giuliomoro@15 803 this.maxDOM = document.createElement("input");
giuliomoro@15 804 this.maxDOM.type = "number";
giuliomoro@15 805 this.maxDOM.name = "max";
giuliomoro@15 806 this.maxDOM.addEventListener("change",this);
giuliomoro@15 807 this.maxDOMText = document.createElement("span");
giuliomoro@15 808 this.maxDOMText.textContent = "Maximum: ";
giuliomoro@15 809 var pairHolder = document.createElement("div");
giuliomoro@15 810 pairHolder.appendChild(this.maxDOMText);
giuliomoro@15 811 pairHolder.appendChild(this.maxDOM);
giuliomoro@15 812 this.rootDOM.appendChild(pairHolder);
giuliomoro@15 813 break;
giuliomoro@15 814 case "radio":
giuliomoro@15 815 case "checkbox":
giuliomoro@15 816 this.options = [];
giuliomoro@15 817 for (var i=0; i<specification.options.length; i++) {
giuliomoro@15 818 var option = specification.options[i];
giuliomoro@15 819 var pairHolder = document.createElement("div");
giuliomoro@15 820 var text = document.createElement("span");
giuliomoro@15 821 text.textContent = option.text;
giuliomoro@15 822 var check = document.createElement("input");
giuliomoro@15 823 check.type = "checkbox";
giuliomoro@15 824 check.setAttribute("option-index",i);
giuliomoro@15 825 check.checked = true;
giuliomoro@15 826 check.addEventListener("click",this);
giuliomoro@15 827 this.options.push(check);
giuliomoro@15 828 pairHolder.appendChild(text);
giuliomoro@15 829 pairHolder.appendChild(check);
giuliomoro@15 830 this.rootDOM.appendChild(pairHolder);
giuliomoro@15 831 }
giuliomoro@15 832 break;
giuliomoro@15 833 default:
giuliomoro@15 834 break;
giuliomoro@15 835 }
giuliomoro@15 836 }
giuliomoro@15 837 var options = [];
giuliomoro@15 838 if(specification.preTest) {
giuliomoro@15 839 options = options.concat(specification.preTest.options);
giuliomoro@15 840 }
giuliomoro@15 841 if (specification.postTest) {
giuliomoro@15 842 options = options.concat(specification.postTest.options);
giuliomoro@15 843 }
giuliomoro@15 844 for (var survey_entry of options) {
giuliomoro@15 845 switch(survey_entry.type) {
giuliomoro@15 846 case "number":
giuliomoro@15 847 case "radio":
giuliomoro@15 848 case "checkbox":
giuliomoro@15 849 var node = new FilterObject(this,survey_entry);
giuliomoro@15 850 this.filterObjects.push(node);
giuliomoro@15 851 this.filterDOM.appendChild(node.rootDOM);
giuliomoro@15 852 break;
giuliomoro@15 853 default:
giuliomoro@15 854 break;
giuliomoro@15 855 }
giuliomoro@15 856 }
giuliomoro@15 857 document.getElementById("test-saved").appendChild(this.filterDOM);
giuliomoro@15 858 document.getElementById("test-saved").appendChild(this.getDataButton.button);
giuliomoro@15 859 document.getElementById("test-saved").appendChild(this.getRawScoreData.root);
giuliomoro@15 860 }
giuliomoro@15 861 this.getFilterString = function() {
giuliomoro@15 862 var pairs = [];
giuliomoro@15 863 for (var obj of this.filterObjects) {
giuliomoro@15 864 pairs = pairs.concat(obj.getFilterPairs());
giuliomoro@15 865 }
giuliomoro@15 866 var req_str = "?url="+this.testSaves.selectedURL;
giuliomoro@15 867 var index = 0;
giuliomoro@15 868 while(pairs[index] != undefined) {
giuliomoro@15 869 req_str += '&';
giuliomoro@15 870 req_str += pairs[index][0]+"="+pairs[index][1];
giuliomoro@15 871 index++;
giuliomoro@15 872 }
giuliomoro@15 873 return req_str;
giuliomoro@15 874 }
giuliomoro@15 875 this.getFilteredUrlArray = function() {
giuliomoro@15 876 var req_str = "../php/get_filtered_count.php"+this.getFilterString();
giuliomoro@15 877 return get(req_str).then(function(response){
giuliomoro@15 878 var urls = JSON.parse(response);
giuliomoro@15 879 return urls.urls;
giuliomoro@15 880 },function(error){
giuliomoro@15 881 console.error(error);
giuliomoro@15 882 });
giuliomoro@15 883 }
giuliomoro@15 884 this.getFileCount = function() {
giuliomoro@15 885 // First we must get the filter pairs
giuliomoro@15 886 this.getFilteredUrlArray().then(function(response){
giuliomoro@15 887 var str = "Filtered to "+response.length+" file";
giuliomoro@15 888 if (response.length != 1) {
giuliomoro@15 889 str += "s.";
giuliomoro@15 890 } else {
giuliomoro@15 891 str += ".";
giuliomoro@15 892 }
giuliomoro@15 893 document.getElementById("filter-count").textContent = str;
giuliomoro@15 894 },function(error){});
giuliomoro@15 895 }
giuliomoro@15 896
giuliomoro@15 897 this.init();
giuliomoro@15 898 }