diff DEPENDENCIES/mingw32/Python27/Lib/site-packages/numpy/testing/tests/test_utils.py @ 87:2a2c65a20a8b

Add Python libs and headers

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/DEPENDENCIES/mingw32/Python27/Lib/site-packages/numpy/testing/tests/test_utils.py	Wed Feb 25 14:05:22 2015 +0000
@@ -0,0 +1,558 @@
+from __future__ import division, absolute_import, print_function
+
+import warnings
+import sys
+
+import numpy as np
+from numpy.testing import *
+import unittest
+
+class _GenericTest(object):
+    def _test_equal(self, a, b):
+        self._assert_func(a, b)
+
+    def _test_not_equal(self, a, b):
+        try:
+            self._assert_func(a, b)
+            passed = True
+        except AssertionError:
+            pass
+        else:
+            raise AssertionError("a and b are found equal but are not")
+
+    def test_array_rank1_eq(self):
+        """Test two equal array of rank 1 are found equal."""
+        a = np.array([1, 2])
+        b = np.array([1, 2])
+
+        self._test_equal(a, b)
+
+    def test_array_rank1_noteq(self):
+        """Test two different array of rank 1 are found not equal."""
+        a = np.array([1, 2])
+        b = np.array([2, 2])
+
+        self._test_not_equal(a, b)
+
+    def test_array_rank2_eq(self):
+        """Test two equal array of rank 2 are found equal."""
+        a = np.array([[1, 2], [3, 4]])
+        b = np.array([[1, 2], [3, 4]])
+
+        self._test_equal(a, b)
+
+    def test_array_diffshape(self):
+        """Test two arrays with different shapes are found not equal."""
+        a = np.array([1, 2])
+        b = np.array([[1, 2], [1, 2]])
+
+        self._test_not_equal(a, b)
+
+    def test_objarray(self):
+        """Test object arrays."""
+        a = np.array([1, 1], dtype=np.object)
+        self._test_equal(a, 1)
+
+    def test_array_likes(self):
+        self._test_equal([1, 2, 3], (1, 2, 3))
+
+class TestArrayEqual(_GenericTest, unittest.TestCase):
+    def setUp(self):
+        self._assert_func = assert_array_equal
+
+    def test_generic_rank1(self):
+        """Test rank 1 array for all dtypes."""
+        def foo(t):
+            a = np.empty(2, t)
+            a.fill(1)
+            b = a.copy()
+            c = a.copy()
+            c.fill(0)
+            self._test_equal(a, b)
+            self._test_not_equal(c, b)
+
+        # Test numeric types and object
+        for t in '?bhilqpBHILQPfdgFDG':
+            foo(t)
+
+        # Test strings
+        for t in ['S1', 'U1']:
+            foo(t)
+
+    def test_generic_rank3(self):
+        """Test rank 3 array for all dtypes."""
+        def foo(t):
+            a = np.empty((4, 2, 3), t)
+            a.fill(1)
+            b = a.copy()
+            c = a.copy()
+            c.fill(0)
+            self._test_equal(a, b)
+            self._test_not_equal(c, b)
+
+        # Test numeric types and object
+        for t in '?bhilqpBHILQPfdgFDG':
+            foo(t)
+
+        # Test strings
+        for t in ['S1', 'U1']:
+            foo(t)
+
+    def test_nan_array(self):
+        """Test arrays with nan values in them."""
+        a = np.array([1, 2, np.nan])
+        b = np.array([1, 2, np.nan])
+
+        self._test_equal(a, b)
+
+        c = np.array([1, 2, 3])
+        self._test_not_equal(c, b)
+
+    def test_string_arrays(self):
+        """Test two arrays with different shapes are found not equal."""
+        a = np.array(['floupi', 'floupa'])
+        b = np.array(['floupi', 'floupa'])
+
+        self._test_equal(a, b)
+
+        c = np.array(['floupipi', 'floupa'])
+
+        self._test_not_equal(c, b)
+
+    def test_recarrays(self):
+        """Test record arrays."""
+        a = np.empty(2, [('floupi', np.float), ('floupa', np.float)])
+        a['floupi'] = [1, 2]
+        a['floupa'] = [1, 2]
+        b = a.copy()
+
+        self._test_equal(a, b)
+
+        c = np.empty(2, [('floupipi', np.float), ('floupa', np.float)])
+        c['floupipi'] = a['floupi'].copy()
+        c['floupa'] = a['floupa'].copy()
+
+        self._test_not_equal(c, b)
+
+class TestBuildErrorMessage(unittest.TestCase):
+    def test_build_err_msg_defaults(self):
+        x = np.array([1.00001, 2.00002, 3.00003])
+        y = np.array([1.00002, 2.00003, 3.00004])
+        err_msg = 'There is a mismatch'
+
+        a = build_err_msg([x, y], err_msg)
+        b = ('\nItems are not equal: There is a mismatch\n ACTUAL: array([ '
+             '1.00001,  2.00002,  3.00003])\n DESIRED: array([ 1.00002,  '
+             '2.00003,  3.00004])')
+        self.assertEqual(a, b)
+
+    def test_build_err_msg_no_verbose(self):
+        x = np.array([1.00001, 2.00002, 3.00003])
+        y = np.array([1.00002, 2.00003, 3.00004])
+        err_msg = 'There is a mismatch'
+
+        a = build_err_msg([x, y], err_msg, verbose=False)
+        b = '\nItems are not equal: There is a mismatch'
+        self.assertEqual(a, b)
+
+    def test_build_err_msg_custom_names(self):
+        x = np.array([1.00001, 2.00002, 3.00003])
+        y = np.array([1.00002, 2.00003, 3.00004])
+        err_msg = 'There is a mismatch'
+
+        a = build_err_msg([x, y], err_msg, names=('FOO', 'BAR'))
+        b = ('\nItems are not equal: There is a mismatch\n FOO: array([ '
+             '1.00001,  2.00002,  3.00003])\n BAR: array([ 1.00002,  2.00003,  '
+             '3.00004])')
+        self.assertEqual(a, b)
+
+    def test_build_err_msg_custom_precision(self):
+        x = np.array([1.000000001, 2.00002, 3.00003])
+        y = np.array([1.000000002, 2.00003, 3.00004])
+        err_msg = 'There is a mismatch'
+
+        a = build_err_msg([x, y], err_msg, precision=10)
+        b = ('\nItems are not equal: There is a mismatch\n ACTUAL: array([ '
+             '1.000000001,  2.00002    ,  3.00003    ])\n DESIRED: array([ '
+             '1.000000002,  2.00003    ,  3.00004    ])')
+        self.assertEqual(a, b)
+
+class TestEqual(TestArrayEqual):
+    def setUp(self):
+        self._assert_func = assert_equal
+
+    def test_nan_items(self):
+        self._assert_func(np.nan, np.nan)
+        self._assert_func([np.nan], [np.nan])
+        self._test_not_equal(np.nan, [np.nan])
+        self._test_not_equal(np.nan, 1)
+
+    def test_inf_items(self):
+        self._assert_func(np.inf, np.inf)
+        self._assert_func([np.inf], [np.inf])
+        self._test_not_equal(np.inf, [np.inf])
+
+    def test_non_numeric(self):
+        self._assert_func('ab', 'ab')
+        self._test_not_equal('ab', 'abb')
+
+    def test_complex_item(self):
+        self._assert_func(complex(1, 2), complex(1, 2))
+        self._assert_func(complex(1, np.nan), complex(1, np.nan))
+        self._test_not_equal(complex(1, np.nan), complex(1, 2))
+        self._test_not_equal(complex(np.nan, 1), complex(1, np.nan))
+        self._test_not_equal(complex(np.nan, np.inf), complex(np.nan, 2))
+
+    def test_negative_zero(self):
+        self._test_not_equal(np.PZERO, np.NZERO)
+
+    def test_complex(self):
+        x = np.array([complex(1, 2), complex(1, np.nan)])
+        y = np.array([complex(1, 2), complex(1, 2)])
+        self._assert_func(x, x)
+        self._test_not_equal(x, y)
+
+class TestArrayAlmostEqual(_GenericTest, unittest.TestCase):
+    def setUp(self):
+        self._assert_func = assert_array_almost_equal
+
+    def test_simple(self):
+        x = np.array([1234.2222])
+        y = np.array([1234.2223])
+
+        self._assert_func(x, y, decimal=3)
+        self._assert_func(x, y, decimal=4)
+        self.assertRaises(AssertionError,
+                lambda: self._assert_func(x, y, decimal=5))
+
+    def test_nan(self):
+        anan = np.array([np.nan])
+        aone = np.array([1])
+        ainf = np.array([np.inf])
+        self._assert_func(anan, anan)
+        self.assertRaises(AssertionError,
+                lambda : self._assert_func(anan, aone))
+        self.assertRaises(AssertionError,
+                lambda : self._assert_func(anan, ainf))
+        self.assertRaises(AssertionError,
+                lambda : self._assert_func(ainf, anan))
+
+    def test_inf(self):
+        a = np.array([[1., 2.], [3., 4.]])
+        b = a.copy()
+        a[0, 0] = np.inf
+        self.assertRaises(AssertionError,
+                lambda : self._assert_func(a, b))
+
+    def test_subclass(self):
+        a = np.array([[1., 2.], [3., 4.]])
+        b = np.ma.masked_array([[1., 2.], [0., 4.]],
+                               [[False, False], [True, False]])
+        assert_array_almost_equal(a, b)
+        assert_array_almost_equal(b, a)
+        assert_array_almost_equal(b, b)
+
+class TestAlmostEqual(_GenericTest, unittest.TestCase):
+    def setUp(self):
+        self._assert_func = assert_almost_equal
+
+    def test_nan_item(self):
+        self._assert_func(np.nan, np.nan)
+        self.assertRaises(AssertionError,
+                lambda : self._assert_func(np.nan, 1))
+        self.assertRaises(AssertionError,
+                lambda : self._assert_func(np.nan, np.inf))
+        self.assertRaises(AssertionError,
+                lambda : self._assert_func(np.inf, np.nan))
+
+    def test_inf_item(self):
+        self._assert_func(np.inf, np.inf)
+        self._assert_func(-np.inf, -np.inf)
+        self.assertRaises(AssertionError,
+                lambda : self._assert_func(np.inf, 1))
+
+    def test_simple_item(self):
+        self._test_not_equal(1, 2)
+
+    def test_complex_item(self):
+        self._assert_func(complex(1, 2), complex(1, 2))
+        self._assert_func(complex(1, np.nan), complex(1, np.nan))
+        self._assert_func(complex(np.inf, np.nan), complex(np.inf, np.nan))
+        self._test_not_equal(complex(1, np.nan), complex(1, 2))
+        self._test_not_equal(complex(np.nan, 1), complex(1, np.nan))
+        self._test_not_equal(complex(np.nan, np.inf), complex(np.nan, 2))
+
+    def test_complex(self):
+        x = np.array([complex(1, 2), complex(1, np.nan)])
+        z = np.array([complex(1, 2), complex(np.nan, 1)])
+        y = np.array([complex(1, 2), complex(1, 2)])
+        self._assert_func(x, x)
+        self._test_not_equal(x, y)
+        self._test_not_equal(x, z)
+
+    def test_error_message(self):
+        """Check the message is formatted correctly for the decimal value"""
+        x = np.array([1.00000000001, 2.00000000002, 3.00003])
+        y = np.array([1.00000000002, 2.00000000003, 3.00004])
+
+        # test with a different amount of decimal digits
+        # note that we only check for the formatting of the arrays themselves
+        b = ('x: array([ 1.00000000001,  2.00000000002,  3.00003     '
+             ' ])\n y: array([ 1.00000000002,  2.00000000003,  3.00004      ])')
+        try:
+            self._assert_func(x, y, decimal=12)
+        except AssertionError as e:
+            # remove anything that's not the array string
+            self.assertEqual(str(e).split('%)\n ')[1], b)
+
+        # with the default value of decimal digits, only the 3rd element differs
+        # note that we only check for the formatting of the arrays themselves
+        b = ('x: array([ 1.     ,  2.     ,  3.00003])\n y: array([ 1.     ,  '
+             '2.     ,  3.00004])')
+        try:
+            self._assert_func(x, y)
+        except AssertionError as e:
+            # remove anything that's not the array string
+            self.assertEqual(str(e).split('%)\n ')[1], b)
+
+class TestApproxEqual(unittest.TestCase):
+    def setUp(self):
+        self._assert_func = assert_approx_equal
+
+    def test_simple_arrays(self):
+        x = np.array([1234.22])
+        y = np.array([1234.23])
+
+        self._assert_func(x, y, significant=5)
+        self._assert_func(x, y, significant=6)
+        self.assertRaises(AssertionError,
+                lambda: self._assert_func(x, y, significant=7))
+
+    def test_simple_items(self):
+        x = 1234.22
+        y = 1234.23
+
+        self._assert_func(x, y, significant=4)
+        self._assert_func(x, y, significant=5)
+        self._assert_func(x, y, significant=6)
+        self.assertRaises(AssertionError,
+                lambda: self._assert_func(x, y, significant=7))
+
+    def test_nan_array(self):
+        anan = np.array(np.nan)
+        aone = np.array(1)
+        ainf = np.array(np.inf)
+        self._assert_func(anan, anan)
+        self.assertRaises(AssertionError,
+                lambda : self._assert_func(anan, aone))
+        self.assertRaises(AssertionError,
+                lambda : self._assert_func(anan, ainf))
+        self.assertRaises(AssertionError,
+                lambda : self._assert_func(ainf, anan))
+
+    def test_nan_items(self):
+        anan = np.array(np.nan)
+        aone = np.array(1)
+        ainf = np.array(np.inf)
+        self._assert_func(anan, anan)
+        self.assertRaises(AssertionError,
+                lambda : self._assert_func(anan, aone))
+        self.assertRaises(AssertionError,
+                lambda : self._assert_func(anan, ainf))
+        self.assertRaises(AssertionError,
+                lambda : self._assert_func(ainf, anan))
+
+class TestRaises(unittest.TestCase):
+    def setUp(self):
+        class MyException(Exception):
+            pass
+
+        self.e = MyException
+
+    def raises_exception(self, e):
+        raise e
+
+    def does_not_raise_exception(self):
+        pass
+
+    def test_correct_catch(self):
+        f = raises(self.e)(self.raises_exception)(self.e)
+
+    def test_wrong_exception(self):
+        try:
+            f = raises(self.e)(self.raises_exception)(RuntimeError)
+        except RuntimeError:
+            return
+        else:
+            raise AssertionError("should have caught RuntimeError")
+
+    def test_catch_no_raise(self):
+        try:
+            f = raises(self.e)(self.does_not_raise_exception)()
+        except AssertionError:
+            return
+        else:
+            raise AssertionError("should have raised an AssertionError")
+
+class TestWarns(unittest.TestCase):
+    def test_warn(self):
+        def f():
+            warnings.warn("yo")
+            return 3
+
+        before_filters = sys.modules['warnings'].filters[:]
+        assert_equal(assert_warns(UserWarning, f), 3)
+        after_filters = sys.modules['warnings'].filters
+
+        assert_raises(AssertionError, assert_no_warnings, f)
+        assert_equal(assert_no_warnings(lambda x: x, 1), 1)
+
+        # Check that the warnings state is unchanged
+        assert_equal(before_filters, after_filters,
+                     "assert_warns does not preserver warnings state")
+
+    def test_warn_wrong_warning(self):
+        def f():
+            warnings.warn("yo", DeprecationWarning)
+
+        failed = False
+        filters = sys.modules['warnings'].filters[:]
+        try:
+            try:
+                # Should raise an AssertionError
+                assert_warns(UserWarning, f)
+                failed = True
+            except AssertionError:
+                pass
+        finally:
+            sys.modules['warnings'].filters = filters
+
+        if failed:
+            raise AssertionError("wrong warning caught by assert_warn")
+
+class TestAssertAllclose(unittest.TestCase):
+    def test_simple(self):
+        x = 1e-3
+        y = 1e-9
+
+        assert_allclose(x, y, atol=1)
+        self.assertRaises(AssertionError, assert_allclose, x, y)
+
+        a = np.array([x, y, x, y])
+        b = np.array([x, y, x, x])
+
+        assert_allclose(a, b, atol=1)
+        self.assertRaises(AssertionError, assert_allclose, a, b)
+
+        b[-1] = y * (1 + 1e-8)
+        assert_allclose(a, b)
+        self.assertRaises(AssertionError, assert_allclose, a, b,
+                          rtol=1e-9)
+
+        assert_allclose(6, 10, rtol=0.5)
+        self.assertRaises(AssertionError, assert_allclose, 10, 6, rtol=0.5)
+
+    def test_min_int(self):
+        a = np.array([np.iinfo(np.int_).min], dtype=np.int_)
+        # Should not raise:
+        assert_allclose(a, a)
+
+
+class TestArrayAlmostEqualNulp(unittest.TestCase):
+    @dec.knownfailureif(True, "Github issue #347")
+    def test_simple(self):
+        np.random.seed(12345)
+        for i in range(100):
+            dev = np.random.randn(10)
+            x = np.ones(10)
+            y = x + dev * np.finfo(np.float64).eps
+            assert_array_almost_equal_nulp(x, y, nulp=2 * np.max(dev))
+
+    def test_simple2(self):
+        x = np.random.randn(10)
+        y = 2 * x
+        def failure():
+            return assert_array_almost_equal_nulp(x, y,
+                                                  nulp=1000)
+        self.assertRaises(AssertionError, failure)
+
+    def test_big_float32(self):
+        x = (1e10 * np.random.randn(10)).astype(np.float32)
+        y = x + 1
+        assert_array_almost_equal_nulp(x, y, nulp=1000)
+
+    def test_big_float64(self):
+        x = 1e10 * np.random.randn(10)
+        y = x + 1
+        def failure():
+            assert_array_almost_equal_nulp(x, y, nulp=1000)
+        self.assertRaises(AssertionError, failure)
+
+    def test_complex(self):
+        x = np.random.randn(10) + 1j * np.random.randn(10)
+        y = x + 1
+        def failure():
+            assert_array_almost_equal_nulp(x, y, nulp=1000)
+        self.assertRaises(AssertionError, failure)
+
+    def test_complex2(self):
+        x = np.random.randn(10)
+        y = np.array(x, np.complex) + 1e-16 * np.random.randn(10)
+
+        assert_array_almost_equal_nulp(x, y, nulp=1000)
+
+class TestULP(unittest.TestCase):
+    def test_equal(self):
+        x = np.random.randn(10)
+        assert_array_max_ulp(x, x, maxulp=0)
+
+    def test_single(self):
+        # Generate 1 + small deviation, check that adding eps gives a few UNL
+        x = np.ones(10).astype(np.float32)
+        x += 0.01 * np.random.randn(10).astype(np.float32)
+        eps = np.finfo(np.float32).eps
+        assert_array_max_ulp(x, x+eps, maxulp=20)
+
+    def test_double(self):
+        # Generate 1 + small deviation, check that adding eps gives a few UNL
+        x = np.ones(10).astype(np.float64)
+        x += 0.01 * np.random.randn(10).astype(np.float64)
+        eps = np.finfo(np.float64).eps
+        assert_array_max_ulp(x, x+eps, maxulp=200)
+
+    def test_inf(self):
+        for dt in [np.float32, np.float64]:
+            inf = np.array([np.inf]).astype(dt)
+            big = np.array([np.finfo(dt).max])
+            assert_array_max_ulp(inf, big, maxulp=200)
+
+    def test_nan(self):
+        # Test that nan is 'far' from small, tiny, inf, max and min
+        for dt in [np.float32, np.float64]:
+            if dt == np.float32:
+                maxulp = 1e6
+            else:
+                maxulp = 1e12
+            inf = np.array([np.inf]).astype(dt)
+            nan = np.array([np.nan]).astype(dt)
+            big = np.array([np.finfo(dt).max])
+            tiny = np.array([np.finfo(dt).tiny])
+            zero = np.array([np.PZERO]).astype(dt)
+            nzero = np.array([np.NZERO]).astype(dt)
+            self.assertRaises(AssertionError,
+                                  lambda: assert_array_max_ulp(nan, inf,
+                                                               maxulp=maxulp))
+            self.assertRaises(AssertionError,
+                                  lambda: assert_array_max_ulp(nan, big,
+                                                               maxulp=maxulp))
+            self.assertRaises(AssertionError,
+                                  lambda: assert_array_max_ulp(nan, tiny,
+                                                               maxulp=maxulp))
+            self.assertRaises(AssertionError,
+                                  lambda: assert_array_max_ulp(nan, zero,
+                                                               maxulp=maxulp))
+            self.assertRaises(AssertionError,
+                                  lambda: assert_array_max_ulp(nan, nzero,
+                                                               maxulp=maxulp))
+if __name__ == '__main__':
+    run_module_suite()