annotate DEPENDENCIES/generic/include/boost/graph/cuthill_mckee_ordering.hpp @ 125:34e428693f5d vext

Vext -> Repoint
author Chris Cannam
date Thu, 14 Jun 2018 11:15:39 +0100
parents 2665513ce2d3
children
rev   line source
Chris@16 1 //=======================================================================
Chris@16 2 // Copyright 1997, 1998, 1999, 2000 University of Notre Dame.
Chris@16 3 // Copyright 2004, 2005 Trustees of Indiana University
Chris@16 4 // Authors: Andrew Lumsdaine, Lie-Quan Lee, Jeremy G. Siek,
Chris@16 5 // Doug Gregor, D. Kevin McGrath
Chris@16 6 //
Chris@16 7 // Distributed under the Boost Software License, Version 1.0. (See
Chris@16 8 // accompanying file LICENSE_1_0.txt or copy at
Chris@16 9 // http://www.boost.org/LICENSE_1_0.txt)
Chris@16 10 //=======================================================================
Chris@16 11 #ifndef BOOST_GRAPH_CUTHILL_MCKEE_HPP
Chris@16 12 #define BOOST_GRAPH_CUTHILL_MCKEE_HPP
Chris@16 13
Chris@16 14 #include <boost/config.hpp>
Chris@16 15 #include <boost/graph/detail/sparse_ordering.hpp>
Chris@16 16 #include <boost/graph/graph_utility.hpp>
Chris@16 17 #include <algorithm>
Chris@16 18
Chris@16 19
Chris@16 20 /*
Chris@16 21 (Reverse) Cuthill-McKee Algorithm for matrix reordering
Chris@16 22 */
Chris@16 23
Chris@16 24 namespace boost {
Chris@16 25
Chris@16 26 namespace detail {
Chris@16 27
Chris@16 28
Chris@16 29
Chris@16 30 template < typename OutputIterator, typename Buffer, typename DegreeMap >
Chris@16 31 class bfs_rcm_visitor:public default_bfs_visitor
Chris@16 32 {
Chris@16 33 public:
Chris@16 34 bfs_rcm_visitor(OutputIterator *iter, Buffer *b, DegreeMap deg):
Chris@16 35 permutation(iter), Qptr(b), degree(deg) { }
Chris@16 36 template <class Vertex, class Graph>
Chris@16 37 void examine_vertex(Vertex u, Graph&) {
Chris@16 38 *(*permutation)++ = u;
Chris@16 39 index_begin = Qptr->size();
Chris@16 40 }
Chris@16 41 template <class Vertex, class Graph>
Chris@16 42 void finish_vertex(Vertex, Graph&) {
Chris@16 43 using std::sort;
Chris@16 44
Chris@16 45 typedef typename property_traits<DegreeMap>::value_type ds_type;
Chris@16 46
Chris@16 47 typedef indirect_cmp<DegreeMap, std::less<ds_type> > Compare;
Chris@16 48 Compare comp(degree);
Chris@16 49
Chris@16 50 sort(Qptr->begin()+index_begin, Qptr->end(), comp);
Chris@16 51 }
Chris@16 52 protected:
Chris@16 53 OutputIterator *permutation;
Chris@16 54 int index_begin;
Chris@16 55 Buffer *Qptr;
Chris@16 56 DegreeMap degree;
Chris@16 57 };
Chris@16 58
Chris@16 59 } // namespace detail
Chris@16 60
Chris@16 61
Chris@16 62 // Reverse Cuthill-McKee algorithm with a given starting Vertex.
Chris@16 63 //
Chris@16 64 // If user provides a reverse iterator, this will be a reverse-cuthill-mckee
Chris@16 65 // algorithm, otherwise it will be a standard CM algorithm
Chris@16 66
Chris@16 67 template <class Graph, class OutputIterator,
Chris@16 68 class ColorMap, class DegreeMap>
Chris@16 69 OutputIterator
Chris@16 70 cuthill_mckee_ordering(const Graph& g,
Chris@16 71 std::deque< typename
Chris@16 72 graph_traits<Graph>::vertex_descriptor > vertex_queue,
Chris@16 73 OutputIterator permutation,
Chris@16 74 ColorMap color, DegreeMap degree)
Chris@16 75 {
Chris@16 76
Chris@16 77 //create queue, visitor...don't forget namespaces!
Chris@16 78 typedef typename graph_traits<Graph>::vertex_descriptor Vertex;
Chris@16 79 typedef typename boost::sparse::sparse_ordering_queue<Vertex> queue;
Chris@16 80 typedef typename detail::bfs_rcm_visitor<OutputIterator, queue, DegreeMap> Visitor;
Chris@16 81 typedef typename property_traits<ColorMap>::value_type ColorValue;
Chris@16 82 typedef color_traits<ColorValue> Color;
Chris@16 83
Chris@16 84
Chris@16 85 queue Q;
Chris@16 86
Chris@16 87 //create a bfs_rcm_visitor as defined above
Chris@16 88 Visitor vis(&permutation, &Q, degree);
Chris@16 89
Chris@16 90 typename graph_traits<Graph>::vertex_iterator ui, ui_end;
Chris@16 91
Chris@16 92 // Copy degree to pseudo_degree
Chris@16 93 // initialize the color map
Chris@16 94 for (boost::tie(ui, ui_end) = vertices(g); ui != ui_end; ++ui){
Chris@16 95 put(color, *ui, Color::white());
Chris@16 96 }
Chris@16 97
Chris@16 98
Chris@16 99 while( !vertex_queue.empty() ) {
Chris@16 100 Vertex s = vertex_queue.front();
Chris@16 101 vertex_queue.pop_front();
Chris@16 102
Chris@16 103 //call BFS with visitor
Chris@16 104 breadth_first_visit(g, s, Q, vis, color);
Chris@16 105 }
Chris@16 106 return permutation;
Chris@16 107 }
Chris@16 108
Chris@16 109
Chris@16 110 // This is the case where only a single starting vertex is supplied.
Chris@16 111 template <class Graph, class OutputIterator,
Chris@16 112 class ColorMap, class DegreeMap>
Chris@16 113 OutputIterator
Chris@16 114 cuthill_mckee_ordering(const Graph& g,
Chris@16 115 typename graph_traits<Graph>::vertex_descriptor s,
Chris@16 116 OutputIterator permutation,
Chris@16 117 ColorMap color, DegreeMap degree)
Chris@16 118 {
Chris@16 119
Chris@16 120 std::deque< typename graph_traits<Graph>::vertex_descriptor > vertex_queue;
Chris@16 121 vertex_queue.push_front( s );
Chris@16 122
Chris@16 123 return cuthill_mckee_ordering(g, vertex_queue, permutation, color, degree);
Chris@16 124
Chris@16 125 }
Chris@16 126
Chris@16 127
Chris@16 128 // This is the version of CM which selects its own starting vertex
Chris@16 129 template < class Graph, class OutputIterator,
Chris@16 130 class ColorMap, class DegreeMap>
Chris@16 131 OutputIterator
Chris@16 132 cuthill_mckee_ordering(const Graph& G, OutputIterator permutation,
Chris@16 133 ColorMap color, DegreeMap degree)
Chris@16 134 {
Chris@16 135 if (boost::graph::has_no_vertices(G))
Chris@16 136 return permutation;
Chris@16 137
Chris@16 138 typedef typename boost::graph_traits<Graph>::vertex_descriptor Vertex;
Chris@16 139 typedef typename property_traits<ColorMap>::value_type ColorValue;
Chris@16 140 typedef color_traits<ColorValue> Color;
Chris@16 141
Chris@16 142 std::deque<Vertex> vertex_queue;
Chris@16 143
Chris@16 144 // Mark everything white
Chris@16 145 BGL_FORALL_VERTICES_T(v, G, Graph) put(color, v, Color::white());
Chris@16 146
Chris@16 147 // Find one vertex from each connected component
Chris@16 148 BGL_FORALL_VERTICES_T(v, G, Graph) {
Chris@16 149 if (get(color, v) == Color::white()) {
Chris@16 150 depth_first_visit(G, v, dfs_visitor<>(), color);
Chris@16 151 vertex_queue.push_back(v);
Chris@16 152 }
Chris@16 153 }
Chris@16 154
Chris@16 155 // Find starting nodes for all vertices
Chris@16 156 // TBD: How to do this with a directed graph?
Chris@16 157 for (typename std::deque<Vertex>::iterator i = vertex_queue.begin();
Chris@16 158 i != vertex_queue.end(); ++i)
Chris@16 159 *i = find_starting_node(G, *i, color, degree);
Chris@16 160
Chris@16 161 return cuthill_mckee_ordering(G, vertex_queue, permutation,
Chris@16 162 color, degree);
Chris@16 163 }
Chris@16 164
Chris@16 165 template<typename Graph, typename OutputIterator, typename VertexIndexMap>
Chris@16 166 OutputIterator
Chris@16 167 cuthill_mckee_ordering(const Graph& G, OutputIterator permutation,
Chris@16 168 VertexIndexMap index_map)
Chris@16 169 {
Chris@16 170 if (boost::graph::has_no_vertices(G))
Chris@16 171 return permutation;
Chris@16 172
Chris@16 173 std::vector<default_color_type> colors(num_vertices(G));
Chris@16 174 return cuthill_mckee_ordering(G, permutation,
Chris@16 175 make_iterator_property_map(&colors[0],
Chris@16 176 index_map,
Chris@16 177 colors[0]),
Chris@16 178 make_out_degree_map(G));
Chris@16 179 }
Chris@16 180
Chris@16 181 template<typename Graph, typename OutputIterator>
Chris@16 182 inline OutputIterator
Chris@16 183 cuthill_mckee_ordering(const Graph& G, OutputIterator permutation)
Chris@16 184 { return cuthill_mckee_ordering(G, permutation, get(vertex_index, G)); }
Chris@16 185 } // namespace boost
Chris@16 186
Chris@16 187
Chris@16 188 #endif // BOOST_GRAPH_CUTHILL_MCKEE_HPP