comparison data/fileio/MatchFileReader.cpp @ 936:0c1d6de8f44b

Merge from branch warnfix_no_size_t

         case 4:
             alignment.refIndex.push_back(line.toInt());
             break;
         }
 
-        if (state < 3) ++state;
-        else if (state == 3 && alignment.thisIndex.size() == count) ++state;
+        if (state < 3) {
+            ++state;
+        } else if (state == 3 && int(alignment.thisIndex.size()) == count) {
+            ++state;
+        }
     }
 
     if (alignment.thisHopTime == 0.0) {
         cerr << "ERROR in Match file: this hop time == 0, using 0.01 instead" << endl;
         alignment.thisHopTime = 0.01;