annotate rdf/RDFImporter.cpp @ 1869:cb9209ef373a startup-timing

Merge from default branch
author Chris Cannam
date Tue, 16 Jun 2020 17:44:06 +0100
parents db489a1ece9b
children
rev   line source
Chris@439 1 /* -*- c-basic-offset: 4 indent-tabs-mode: nil -*- vi:set ts=8 sts=4 sw=4: */
Chris@439 2
Chris@439 3 /*
Chris@439 4 Sonic Visualiser
Chris@439 5 An audio file viewer and annotation editor.
Chris@439 6 Centre for Digital Music, Queen Mary, University of London.
Chris@727 7 This file copyright 2008-2012 QMUL.
Chris@439 8
Chris@439 9 This program is free software; you can redistribute it and/or
Chris@439 10 modify it under the terms of the GNU General Public License as
Chris@439 11 published by the Free Software Foundation; either version 2 of the
Chris@439 12 License, or (at your option) any later version. See the file
Chris@439 13 COPYING included with this distribution for more information.
Chris@439 14 */
Chris@439 15
Chris@439 16 #include "RDFImporter.h"
Chris@439 17
Chris@439 18 #include <map>
Chris@439 19 #include <vector>
Chris@439 20
Chris@439 21 #include <iostream>
Chris@439 22 #include <cmath>
Chris@439 23
Chris@439 24 #include "base/ProgressReporter.h"
Chris@439 25 #include "base/RealTime.h"
Chris@1852 26 #include "base/StringBits.h"
Chris@439 27
Chris@439 28 #include "data/model/SparseOneDimensionalModel.h"
Chris@439 29 #include "data/model/SparseTimeValueModel.h"
Chris@439 30 #include "data/model/EditableDenseThreeDimensionalModel.h"
Chris@449 31 #include "data/model/NoteModel.h"
Chris@510 32 #include "data/model/TextModel.h"
Chris@449 33 #include "data/model/RegionModel.h"
Chris@1122 34 #include "data/model/ReadOnlyWaveFileModel.h"
Chris@499 35
Chris@499 36 #include "data/fileio/FileSource.h"
Chris@520 37 #include "data/fileio/CachedFile.h"
Chris@581 38 #include "data/fileio/FileFinder.h"
Chris@1855 39 #include "data/fileio/TextTest.h"
Chris@522 40
Chris@726 41 #include <dataquay/BasicStore.h>
Chris@726 42 #include <dataquay/PropertyObject.h>
Chris@726 43
Chris@726 44 using Dataquay::Uri;
Chris@726 45 using Dataquay::Node;
Chris@726 46 using Dataquay::Nodes;
Chris@726 47 using Dataquay::Triple;
Chris@726 48 using Dataquay::Triples;
Chris@726 49 using Dataquay::BasicStore;
Chris@726 50 using Dataquay::PropertyObject;
Chris@726 51
Chris@439 52 class RDFImporterImpl
Chris@439 53 {
Chris@439 54 public:
Chris@1040 55 RDFImporterImpl(QString url, sv_samplerate_t sampleRate);
Chris@439 56 virtual ~RDFImporterImpl();
Chris@490 57
Chris@1040 58 void setSampleRate(sv_samplerate_t sampleRate) { m_sampleRate = sampleRate; }
Chris@439 59
Chris@439 60 bool isOK();
Chris@439 61 QString getErrorString() const;
Chris@439 62
Chris@1752 63 std::vector<ModelId> getDataModels(ProgressReporter *);
Chris@439 64
Chris@439 65 protected:
Chris@726 66 BasicStore *m_store;
Chris@730 67 Uri expand(QString s) { return m_store->expand(s); }
Chris@726 68
Chris@439 69 QString m_uristring;
Chris@439 70 QString m_errorString;
Chris@1752 71 std::map<QString, ModelId> m_audioModelMap;
Chris@1040 72 sv_samplerate_t m_sampleRate;
Chris@439 73
Chris@1752 74 std::map<ModelId, std::map<QString, float> > m_labelValueMap;
Chris@617 75
Chris@1752 76 void getDataModelsAudio(std::vector<ModelId> &, ProgressReporter *);
Chris@1752 77 void getDataModelsSparse(std::vector<ModelId> &, ProgressReporter *);
Chris@1752 78 void getDataModelsDense(std::vector<ModelId> &, ProgressReporter *);
Chris@440 79
Chris@1752 80 QString getDenseModelTitle(QString featureUri, QString featureTypeUri);
Chris@493 81
Chris@440 82 void getDenseFeatureProperties(QString featureUri,
Chris@1040 83 sv_samplerate_t &sampleRate, int &windowLength,
Chris@440 84 int &hopSize, int &width, int &height);
Chris@440 85
Chris@1752 86 void fillModel(ModelId, sv_frame_t, sv_frame_t,
Chris@1039 87 bool, std::vector<float> &, QString);
Chris@439 88 };
Chris@439 89
Chris@439 90 QString
Chris@439 91 RDFImporter::getKnownExtensions()
Chris@439 92 {
Chris@439 93 return "*.rdf *.n3 *.ttl";
Chris@439 94 }
Chris@439 95
Chris@1040 96 RDFImporter::RDFImporter(QString url, sv_samplerate_t sampleRate) :
Chris@439 97 m_d(new RDFImporterImpl(url, sampleRate))
Chris@439 98 {
Chris@439 99 }
Chris@439 100
Chris@439 101 RDFImporter::~RDFImporter()
Chris@439 102 {
Chris@439 103 delete m_d;
Chris@439 104 }
Chris@439 105
Chris@490 106 void
Chris@1040 107 RDFImporter::setSampleRate(sv_samplerate_t sampleRate)
Chris@490 108 {
Chris@490 109 m_d->setSampleRate(sampleRate);
Chris@490 110 }
Chris@490 111
Chris@439 112 bool
Chris@439 113 RDFImporter::isOK()
Chris@439 114 {
Chris@439 115 return m_d->isOK();
Chris@439 116 }
Chris@439 117
Chris@439 118 QString
Chris@439 119 RDFImporter::getErrorString() const
Chris@439 120 {
Chris@439 121 return m_d->getErrorString();
Chris@439 122 }
Chris@439 123
Chris@1752 124 std::vector<ModelId>
Chris@439 125 RDFImporter::getDataModels(ProgressReporter *r)
Chris@439 126 {
Chris@439 127 return m_d->getDataModels(r);
Chris@439 128 }
Chris@439 129
Chris@1040 130 RDFImporterImpl::RDFImporterImpl(QString uri, sv_samplerate_t sampleRate) :
Chris@726 131 m_store(new BasicStore),
Chris@439 132 m_uristring(uri),
Chris@439 133 m_sampleRate(sampleRate)
Chris@439 134 {
Chris@726 135 //!!! retrieve data if remote... then
Chris@726 136
Chris@726 137 m_store->addPrefix("mo", Uri("http://purl.org/ontology/mo/"));
Chris@726 138 m_store->addPrefix("af", Uri("http://purl.org/ontology/af/"));
Chris@726 139 m_store->addPrefix("dc", Uri("http://purl.org/dc/elements/1.1/"));
Chris@726 140 m_store->addPrefix("tl", Uri("http://purl.org/NET/c4dm/timeline.owl#"));
Chris@726 141 m_store->addPrefix("event", Uri("http://purl.org/NET/c4dm/event.owl#"));
Chris@726 142 m_store->addPrefix("rdfs", Uri("http://www.w3.org/2000/01/rdf-schema#"));
Chris@727 143
Chris@738 144 try {
Chris@738 145 QUrl url;
Chris@738 146 if (uri.startsWith("file:")) {
Chris@738 147 url = QUrl(uri);
Chris@738 148 } else {
Chris@738 149 url = QUrl::fromLocalFile(uri);
Chris@738 150 }
Chris@738 151 m_store->import(url, BasicStore::ImportIgnoreDuplicates);
Chris@738 152 } catch (std::exception &e) {
Chris@738 153 m_errorString = e.what();
Chris@736 154 }
Chris@439 155 }
Chris@439 156
Chris@439 157 RDFImporterImpl::~RDFImporterImpl()
Chris@439 158 {
Chris@726 159 delete m_store;
Chris@439 160 }
Chris@439 161
Chris@439 162 bool
Chris@439 163 RDFImporterImpl::isOK()
Chris@439 164 {
Chris@439 165 return (m_errorString == "");
Chris@439 166 }
Chris@439 167
Chris@439 168 QString
Chris@439 169 RDFImporterImpl::getErrorString() const
Chris@439 170 {
Chris@439 171 return m_errorString;
Chris@439 172 }
Chris@439 173
Chris@1752 174 std::vector<ModelId>
Chris@439 175 RDFImporterImpl::getDataModels(ProgressReporter *reporter)
Chris@439 176 {
Chris@1752 177 std::vector<ModelId> models;
Chris@439 178
Chris@499 179 getDataModelsAudio(models, reporter);
Chris@499 180
Chris@490 181 if (m_sampleRate == 0) {
Chris@616 182 m_errorString = QString("Invalid audio data model (is audio file format supported?)");
Chris@843 183 cerr << m_errorString << endl;
Chris@490 184 return models;
Chris@490 185 }
Chris@490 186
Chris@508 187 QString error;
Chris@508 188
Chris@522 189 if (m_errorString != "") {
Chris@522 190 error = m_errorString;
Chris@522 191 }
Chris@508 192 m_errorString = "";
Chris@508 193
Chris@440 194 getDataModelsDense(models, reporter);
Chris@440 195
Chris@522 196 if (m_errorString != "") {
Chris@522 197 error = m_errorString;
Chris@522 198 }
Chris@440 199 m_errorString = "";
Chris@440 200
Chris@440 201 getDataModelsSparse(models, reporter);
Chris@440 202
Chris@522 203 if (m_errorString == "" && error != "") {
Chris@522 204 m_errorString = error;
Chris@522 205 }
Chris@440 206
Chris@440 207 return models;
Chris@440 208 }
Chris@440 209
Chris@440 210 void
Chris@1752 211 RDFImporterImpl::getDataModelsAudio(std::vector<ModelId> &models,
Chris@499 212 ProgressReporter *reporter)
Chris@499 213 {
Chris@726 214 Nodes sigs = m_store->match
Chris@730 215 (Triple(Node(), Uri("a"), expand("mo:Signal"))).subjects();
Chris@499 216
Chris@726 217 foreach (Node sig, sigs) {
Chris@726 218
Chris@730 219 Node file = m_store->complete(Triple(Node(), expand("mo:encodes"), sig));
Chris@726 220 if (file == Node()) {
Chris@730 221 file = m_store->complete(Triple(sig, expand("mo:available_as"), Node()));
Chris@726 222 }
Chris@726 223 if (file == Node()) {
Chris@843 224 cerr << "RDFImporterImpl::getDataModelsAudio: ERROR: No source for signal " << sig << endl;
Chris@726 225 continue;
Chris@726 226 }
Chris@499 227
Chris@726 228 QString signal = sig.value;
Chris@726 229 QString source = file.value;
Chris@589 230
Chris@726 231 SVDEBUG << "NOTE: Seeking signal source \"" << source
Chris@726 232 << "\"..." << endl;
Chris@616 233
Chris@522 234 FileSource *fs = new FileSource(source, reporter);
Chris@616 235 if (fs->isAvailable()) {
Chris@690 236 SVDEBUG << "NOTE: Source is available: Local filename is \""
Chris@726 237 << fs->getLocalFilename()
Chris@726 238 << "\"..." << endl;
Chris@616 239 }
Chris@616 240
Chris@522 241 #ifdef NO_SV_GUI
Chris@522 242 if (!fs->isAvailable()) {
Chris@522 243 m_errorString = QString("Signal source \"%1\" is not available").arg(source);
Chris@522 244 delete fs;
Chris@522 245 continue;
Chris@522 246 }
Chris@522 247 #else
Chris@522 248 if (!fs->isAvailable()) {
Chris@726 249 SVDEBUG << "NOTE: Signal source \"" << source
Chris@726 250 << "\" is not available, using file finder..." << endl;
Chris@522 251 FileFinder *ff = FileFinder::getInstance();
Chris@581 252 if (ff) {
Chris@581 253 QString path = ff->find(FileFinder::AudioFile,
Chris@581 254 fs->getLocation(),
Chris@581 255 m_uristring);
Chris@581 256 if (path != "") {
Chris@844 257 cerr << "File finder returns: \"" << path
Chris@843 258 << "\"" << endl;
Chris@522 259 delete fs;
Chris@581 260 fs = new FileSource(path, reporter);
Chris@581 261 if (!fs->isAvailable()) {
Chris@581 262 delete fs;
Chris@581 263 m_errorString = QString("Signal source \"%1\" is not available").arg(source);
Chris@581 264 continue;
Chris@581 265 }
Chris@522 266 }
Chris@499 267 }
Chris@522 268 }
Chris@522 269 #endif
Chris@522 270
Chris@522 271 if (reporter) {
Chris@522 272 reporter->setMessage(RDFImporter::tr("Importing audio referenced in RDF..."));
Chris@522 273 }
Chris@522 274 fs->waitForData();
Chris@1752 275 auto newModel = std::make_shared<ReadOnlyWaveFileModel>
Chris@1752 276 (*fs, m_sampleRate);
Chris@522 277 if (newModel->isOK()) {
Chris@843 278 cerr << "Successfully created wave file model from source at \"" << source << "\"" << endl;
Chris@1752 279 auto modelId = ModelById::add(newModel);
Chris@1752 280 models.push_back(modelId);
Chris@1752 281 m_audioModelMap[signal] = modelId;
Chris@522 282 if (m_sampleRate == 0) {
Chris@522 283 m_sampleRate = newModel->getSampleRate();
Chris@499 284 }
Chris@508 285 } else {
Chris@522 286 m_errorString = QString("Failed to create wave file model from source at \"%1\"").arg(source);
Chris@499 287 }
Chris@522 288 delete fs;
Chris@499 289 }
Chris@499 290 }
Chris@499 291
Chris@499 292 void
Chris@1752 293 RDFImporterImpl::getDataModelsDense(std::vector<ModelId> &models,
Chris@440 294 ProgressReporter *reporter)
Chris@440 295 {
Chris@499 296 if (reporter) {
Chris@499 297 reporter->setMessage(RDFImporter::tr("Importing dense signal data from RDF..."));
Chris@499 298 }
Chris@499 299
Chris@726 300 Nodes sigFeatures = m_store->match
Chris@730 301 (Triple(Node(), expand("af:signal_feature"), Node())).objects();
Chris@440 302
Chris@726 303 foreach (Node sf, sigFeatures) {
Chris@440 304
Chris@726 305 if (sf.type != Node::URI && sf.type != Node::Blank) continue;
Chris@726 306
Chris@730 307 Node t = m_store->complete(Triple(sf, expand("a"), Node()));
Chris@730 308 Node v = m_store->complete(Triple(sf, expand("af:value"), Node()));
Chris@440 309
Chris@726 310 QString feature = sf.value;
Chris@726 311 QString type = t.value;
Chris@726 312 QString value = v.value;
Chris@726 313
Chris@726 314 if (type == "" || value == "") continue;
Chris@440 315
Chris@1040 316 sv_samplerate_t sampleRate = 0;
Chris@440 317 int windowLength = 0;
Chris@440 318 int hopSize = 0;
Chris@440 319 int width = 0;
Chris@440 320 int height = 0;
Chris@440 321 getDenseFeatureProperties
Chris@440 322 (feature, sampleRate, windowLength, hopSize, width, height);
Chris@440 323
Chris@440 324 if (sampleRate != 0 && sampleRate != m_sampleRate) {
Chris@440 325 cerr << "WARNING: Sample rate in dense feature description does not match our underlying rate -- using rate from feature description" << endl;
Chris@440 326 }
Chris@440 327 if (sampleRate == 0) sampleRate = m_sampleRate;
Chris@440 328
Chris@440 329 if (hopSize == 0) {
Chris@440 330 cerr << "WARNING: Dense feature description does not specify a hop size -- assuming 1" << endl;
Chris@440 331 hopSize = 1;
Chris@440 332 }
Chris@440 333
Chris@440 334 if (height == 0) {
Chris@440 335 cerr << "WARNING: Dense feature description does not specify feature signal dimensions -- assuming one-dimensional (height = 1)" << endl;
Chris@440 336 height = 1;
Chris@440 337 }
Chris@440 338
Chris@440 339 QStringList values = value.split(' ', QString::SkipEmptyParts);
Chris@440 340
Chris@440 341 if (values.empty()) {
Chris@440 342 cerr << "WARNING: Dense feature description does not specify any values!" << endl;
Chris@440 343 continue;
Chris@440 344 }
Chris@440 345
Chris@440 346 if (height == 1) {
Chris@440 347
Chris@1752 348 auto m = std::make_shared<SparseTimeValueModel>
Chris@440 349 (sampleRate, hopSize, false);
Chris@440 350
Chris@440 351 for (int j = 0; j < values.size(); ++j) {
Chris@440 352 float f = values[j].toFloat();
Chris@1651 353 Event e(j * hopSize, f, "");
Chris@1651 354 m->add(e);
Chris@440 355 }
Chris@493 356
Chris@1752 357 m->setObjectName(getDenseModelTitle(feature, type));
Chris@558 358 m->setRDFTypeURI(type);
Chris@1752 359 models.push_back(ModelById::add(m));
Chris@440 360
Chris@440 361 } else {
Chris@440 362
Chris@1752 363 auto m = std::make_shared<EditableDenseThreeDimensionalModel>
Chris@1777 364 (sampleRate, hopSize, height, false);
Chris@440 365
Chris@440 366 EditableDenseThreeDimensionalModel::Column column;
Chris@440 367
Chris@440 368 int x = 0;
Chris@440 369
Chris@440 370 for (int j = 0; j < values.size(); ++j) {
Chris@440 371 if (j % height == 0 && !column.empty()) {
Chris@440 372 m->setColumn(x++, column);
Chris@440 373 column.clear();
Chris@440 374 }
Chris@440 375 column.push_back(values[j].toFloat());
Chris@440 376 }
Chris@440 377
Chris@440 378 if (!column.empty()) {
Chris@440 379 m->setColumn(x++, column);
Chris@440 380 }
Chris@440 381
Chris@1752 382 m->setObjectName(getDenseModelTitle(feature, type));
Chris@558 383 m->setRDFTypeURI(type);
Chris@1752 384 models.push_back(ModelById::add(m));
Chris@440 385 }
Chris@440 386 }
Chris@440 387 }
Chris@440 388
Chris@1752 389 QString
Chris@1752 390 RDFImporterImpl::getDenseModelTitle(QString featureUri,
Chris@493 391 QString featureTypeUri)
Chris@493 392 {
Chris@730 393 Node n = m_store->complete
Chris@730 394 (Triple(Uri(featureUri), expand("dc:title"), Node()));
Chris@493 395
Chris@726 396 if (n.type == Node::Literal && n.value != "") {
Chris@726 397 SVDEBUG << "RDFImporterImpl::getDenseModelTitle: Title (from signal) \"" << n.value << "\"" << endl;
Chris@1752 398 return n.value;
Chris@493 399 }
Chris@493 400
Chris@730 401 n = m_store->complete
Chris@730 402 (Triple(Uri(featureTypeUri), expand("dc:title"), Node()));
Chris@726 403
Chris@726 404 if (n.type == Node::Literal && n.value != "") {
Chris@726 405 SVDEBUG << "RDFImporterImpl::getDenseModelTitle: Title (from signal type) \"" << n.value << "\"" << endl;
Chris@1752 406 return n.value;
Chris@493 407 }
Chris@493 408
Chris@690 409 SVDEBUG << "RDFImporterImpl::getDenseModelTitle: No title available for feature <" << featureUri << ">" << endl;
Chris@1752 410 return {};
Chris@493 411 }
Chris@493 412
Chris@493 413 void
Chris@440 414 RDFImporterImpl::getDenseFeatureProperties(QString featureUri,
Chris@1040 415 sv_samplerate_t &sampleRate, int &windowLength,
Chris@440 416 int &hopSize, int &width, int &height)
Chris@440 417 {
Chris@730 418 Node dim = m_store->complete
Chris@730 419 (Triple(Uri(featureUri), expand("af:dimensions"), Node()));
Chris@489 420
Chris@726 421 cerr << "Dimensions = \"" << dim.value << "\"" << endl;
Chris@440 422
Chris@726 423 if (dim.type == Node::Literal && dim.value != "") {
Chris@726 424 QStringList dl = dim.value.split(" ");
Chris@726 425 if (dl.empty()) dl.push_back(dim.value);
Chris@440 426 if (dl.size() > 0) height = dl[0].toInt();
Chris@440 427 if (dl.size() > 1) width = dl[1].toInt();
Chris@440 428 }
Chris@726 429
Chris@726 430 // Looking for rate, hop, window from:
Chris@726 431 //
Chris@726 432 // ?feature mo:time ?time .
Chris@726 433 // ?time a tl:Interval .
Chris@726 434 // ?time tl:onTimeLine ?timeline .
Chris@726 435 // ?map tl:rangeTimeLine ?timeline .
Chris@726 436 // ?map tl:sampleRate ?rate .
Chris@726 437 // ?map tl:hopSize ?hop .
Chris@726 438 // ?map tl:windowLength ?window .
Chris@440 439
Chris@730 440 Node interval = m_store->complete(Triple(Uri(featureUri), expand("mo:time"), Node()));
Chris@440 441
Chris@730 442 if (!m_store->contains(Triple(interval, expand("a"), expand("tl:Interval")))) {
Chris@726 443 cerr << "RDFImporterImpl::getDenseFeatureProperties: Feature time node "
Chris@726 444 << interval << " is not a tl:Interval" << endl;
Chris@726 445 return;
Chris@440 446 }
Chris@440 447
Chris@730 448 Node tl = m_store->complete(Triple(interval, expand("tl:onTimeLine"), Node()));
Chris@726 449
Chris@726 450 if (tl == Node()) {
Chris@726 451 cerr << "RDFImporterImpl::getDenseFeatureProperties: Interval node "
Chris@726 452 << interval << " lacks tl:onTimeLine property" << endl;
Chris@726 453 return;
Chris@440 454 }
Chris@440 455
Chris@730 456 Node map = m_store->complete(Triple(Node(), expand("tl:rangeTimeLine"), tl));
Chris@726 457
Chris@726 458 if (map == Node()) {
Chris@726 459 cerr << "RDFImporterImpl::getDenseFeatureProperties: No map for "
Chris@726 460 << "timeline node " << tl << endl;
Chris@726 461 }
Chris@726 462
Chris@726 463 PropertyObject po(m_store, "tl:", map);
Chris@726 464
Chris@726 465 if (po.hasProperty("sampleRate")) {
Chris@1040 466 sampleRate = po.getProperty("sampleRate").toDouble();
Chris@726 467 }
Chris@726 468 if (po.hasProperty("hopSize")) {
Chris@726 469 hopSize = po.getProperty("hopSize").toInt();
Chris@726 470 }
Chris@726 471 if (po.hasProperty("windowLength")) {
Chris@726 472 windowLength = po.getProperty("windowLength").toInt();
Chris@440 473 }
Chris@440 474
Chris@440 475 cerr << "sr = " << sampleRate << ", hop = " << hopSize << ", win = " << windowLength << endl;
Chris@440 476 }
Chris@440 477
Chris@440 478 void
Chris@1752 479 RDFImporterImpl::getDataModelsSparse(std::vector<ModelId> &models,
Chris@440 480 ProgressReporter *reporter)
Chris@440 481 {
Chris@499 482 if (reporter) {
Chris@499 483 reporter->setMessage(RDFImporter::tr("Importing event data from RDF..."));
Chris@499 484 }
Chris@499 485
Chris@726 486 /*
Chris@726 487 This function is only used for sparse data (for dense data we
Chris@726 488 would be in getDataModelsDense instead).
Chris@489 489
Chris@726 490 Our query is intended to retrieve every thing that has a time,
Chris@726 491 and every feature type and value associated with a thing that
Chris@726 492 has a time.
Chris@439 493
Chris@726 494 We will then need to refine this big bag of results into a set
Chris@726 495 of data models.
Chris@439 496
Chris@726 497 Results that have different source signals should go into
Chris@726 498 different models.
Chris@439 499
Chris@726 500 Results that have different feature types should go into
Chris@726 501 different models.
Chris@726 502 */
Chris@439 503
Chris@726 504 Nodes sigs = m_store->match
Chris@730 505 (Triple(Node(), expand("a"), expand("mo:Signal"))).subjects();
Chris@449 506
Chris@616 507 // Map from timeline uri to event type to dimensionality to
Chris@1752 508 // presence of duration to model id. Whee!
Chris@1752 509 std::map<QString, std::map<QString, std::map<int, std::map<bool, ModelId> > > >
Chris@449 510 modelMap;
Chris@449 511
Chris@726 512 foreach (Node sig, sigs) {
Chris@726 513
Chris@730 514 Node interval = m_store->complete(Triple(sig, expand("mo:time"), Node()));
Chris@726 515 if (interval == Node()) continue;
Chris@439 516
Chris@730 517 Node tl = m_store->complete(Triple(interval, expand("tl:onTimeLine"), Node()));
Chris@726 518 if (tl == Node()) continue;
Chris@499 519
Chris@730 520 Nodes times = m_store->match(Triple(Node(), expand("tl:onTimeLine"), tl)).subjects();
Chris@449 521
Chris@726 522 foreach (Node tn, times) {
Chris@726 523
Chris@730 524 Nodes timedThings = m_store->match(Triple(Node(), expand("event:time"), tn)).subjects();
Chris@439 525
Chris@726 526 foreach (Node thing, timedThings) {
Chris@726 527
Chris@730 528 Node typ = m_store->complete(Triple(thing, expand("a"), Node()));
Chris@726 529 if (typ == Node()) continue;
Chris@439 530
Chris@730 531 Node valu = m_store->complete(Triple(thing, expand("af:feature"), Node()));
Chris@510 532
Chris@726 533 QString source = sig.value;
Chris@726 534 QString timeline = tl.value;
Chris@726 535 QString type = typ.value;
Chris@726 536 QString thinguri = thing.value;
Chris@510 537
Chris@726 538 /*
Chris@726 539 For sparse data, the determining factors in deciding
Chris@726 540 what model to use are: Do the features have values?
Chris@726 541 and Do the features have duration?
Chris@449 542
Chris@726 543 We can run through the results and check off whether
Chris@726 544 we find values and duration for each of the
Chris@726 545 source+type keys, and then run through the
Chris@726 546 source+type keys pushing each of the results into a
Chris@726 547 suitable model.
Chris@439 548
Chris@726 549 Unfortunately, at this point we do not yet have any
Chris@726 550 actual timing data (time/duration) -- just the time
Chris@726 551 URI.
Chris@449 552
Chris@726 553 What we _could_ do is to create one of each type of
Chris@726 554 model at the start, for each of the source+type
Chris@726 555 keys, and then push each feature into the relevant
Chris@726 556 model depending on what we find out about it. Then
Chris@726 557 return only non-empty models.
Chris@726 558 */
Chris@439 559
Chris@726 560 QString label = "";
Chris@726 561 bool text = (type.contains("Text") || type.contains("text")); // Ha, ha
Chris@726 562 bool note = (type.contains("Note") || type.contains("note")); // Guffaw
Chris@449 563
Chris@726 564 if (text) {
Chris@730 565 label = m_store->complete(Triple(thing, expand("af:text"), Node())).value;
Chris@726 566 }
Chris@726 567
Chris@726 568 if (label == "") {
Chris@730 569 label = m_store->complete(Triple(thing, expand("rdfs:label"), Node())).value;
Chris@726 570 }
Chris@449 571
Chris@726 572 RealTime time;
Chris@726 573 RealTime duration;
Chris@726 574
Chris@930 575 // bool haveTime = false;
Chris@726 576 bool haveDuration = false;
Chris@726 577
Chris@730 578 Node at = m_store->complete(Triple(tn, expand("tl:at"), Node()));
Chris@726 579
Chris@726 580 if (at != Node()) {
Chris@726 581 time = RealTime::fromXsdDuration(at.value.toStdString());
Chris@930 582 // haveTime = true;
Chris@726 583 } else {
Chris@726 584 //!!! NB we're using rather old terminology for these things, apparently:
Chris@726 585 // beginsAt -> start
Chris@726 586 // onTimeLine -> timeline
Chris@726 587
Chris@730 588 Node start = m_store->complete(Triple(tn, expand("tl:beginsAt"), Node()));
Chris@730 589 Node dur = m_store->complete(Triple(tn, expand("tl:duration"), Node()));
Chris@726 590 if (start != Node() && dur != Node()) {
Chris@726 591 time = RealTime::fromXsdDuration
Chris@726 592 (start.value.toStdString());
Chris@726 593 duration = RealTime::fromXsdDuration
Chris@726 594 (dur.value.toStdString());
Chris@930 595 // haveTime = haveDuration = true;
Chris@726 596 }
Chris@726 597 }
Chris@726 598
Chris@726 599 QString valuestring = valu.value;
Chris@726 600 std::vector<float> values;
Chris@726 601
Chris@726 602 if (valuestring != "") {
Chris@726 603 QStringList vsl = valuestring.split(" ", QString::SkipEmptyParts);
Chris@726 604 for (int j = 0; j < vsl.size(); ++j) {
Chris@726 605 bool success = false;
Chris@726 606 float v = vsl[j].toFloat(&success);
Chris@726 607 if (success) values.push_back(v);
Chris@726 608 }
Chris@726 609 }
Chris@726 610
Chris@726 611 int dimensions = 1;
Chris@726 612 if (values.size() == 1) dimensions = 2;
Chris@726 613 else if (values.size() > 1) dimensions = 3;
Chris@726 614
Chris@1752 615 ModelId modelId;
Chris@726 616
Chris@726 617 if (modelMap[timeline][type][dimensions].find(haveDuration) ==
Chris@726 618 modelMap[timeline][type][dimensions].end()) {
Chris@449 619
Chris@449 620 /*
Chris@690 621 SVDEBUG << "Creating new model: source = " << source << ", type = " << type << ", dimensions = "
Chris@449 622 << dimensions << ", haveDuration = " << haveDuration
Chris@449 623 << ", time = " << time << ", duration = " << duration
Chris@687 624 << endl;
Chris@449 625 */
Chris@1752 626
Chris@1752 627 Model *model = nullptr;
Chris@1752 628
Chris@726 629 if (!haveDuration) {
Chris@449 630
Chris@726 631 if (dimensions == 1) {
Chris@726 632 if (text) {
Chris@726 633 model = new TextModel(m_sampleRate, 1, false);
Chris@726 634 } else {
Chris@726 635 model = new SparseOneDimensionalModel(m_sampleRate, 1, false);
Chris@726 636 }
Chris@726 637 } else if (dimensions == 2) {
Chris@726 638 if (text) {
Chris@726 639 model = new TextModel(m_sampleRate, 1, false);
Chris@726 640 } else {
Chris@726 641 model = new SparseTimeValueModel(m_sampleRate, 1, false);
Chris@726 642 }
Chris@726 643 } else {
Chris@726 644 // We don't have a three-dimensional sparse model,
Chris@726 645 // so use a note model. We do have some logic (in
Chris@726 646 // extractStructure below) for guessing whether
Chris@726 647 // this should after all have been a dense model,
Chris@726 648 // but it's hard to apply it because we don't have
Chris@726 649 // all the necessary timing data yet... hmm
Chris@726 650 model = new NoteModel(m_sampleRate, 1, false);
Chris@726 651 }
Chris@449 652
Chris@726 653 } else { // haveDuration
Chris@510 654
Chris@726 655 if (note || (dimensions > 2)) {
Chris@726 656 model = new NoteModel(m_sampleRate, 1, false);
Chris@726 657 } else {
Chris@726 658 // If our units are frequency or midi pitch, we
Chris@726 659 // should be using a note model... hm
Chris@726 660 model = new RegionModel(m_sampleRate, 1, false);
Chris@726 661 }
Chris@510 662 }
Chris@449 663
Chris@726 664 model->setRDFTypeURI(type);
Chris@449 665
Chris@726 666 if (m_audioModelMap.find(source) != m_audioModelMap.end()) {
Chris@843 667 cerr << "source model for " << model << " is " << m_audioModelMap[source] << endl;
Chris@1752 668 model->setSourceModel(m_audioModelMap[source]);
Chris@510 669 }
Chris@449 670
Chris@730 671 QString title = m_store->complete
Chris@730 672 (Triple(typ, expand("dc:title"), Node())).value;
Chris@726 673 if (title == "") {
Chris@726 674 // take it from the end of the event type
Chris@726 675 title = type;
Chris@726 676 title.replace(QRegExp("^.*[/#]"), "");
Chris@726 677 }
Chris@726 678 model->setObjectName(title);
Chris@449 679
Chris@1752 680 modelId = ModelById::add(std::shared_ptr<Model>(model));
Chris@1752 681 modelMap[timeline][type][dimensions][haveDuration] = modelId;
Chris@1752 682 models.push_back(modelId);
Chris@449 683 }
Chris@449 684
Chris@1752 685 modelId = modelMap[timeline][type][dimensions][haveDuration];
Chris@449 686
Chris@1752 687 if (!modelId.isNone()) {
Chris@1752 688 sv_frame_t ftime =
Chris@1752 689 RealTime::realTime2Frame(time, m_sampleRate);
Chris@1752 690 sv_frame_t fduration =
Chris@1752 691 RealTime::realTime2Frame(duration, m_sampleRate);
Chris@1752 692 fillModel(modelId, ftime, fduration,
Chris@1752 693 haveDuration, values, label);
Chris@449 694 }
Chris@449 695 }
Chris@439 696 }
Chris@439 697 }
Chris@439 698 }
Chris@439 699
Chris@439 700 void
Chris@1752 701 RDFImporterImpl::fillModel(ModelId modelId,
Chris@1039 702 sv_frame_t ftime,
Chris@1039 703 sv_frame_t fduration,
Chris@449 704 bool haveDuration,
Chris@449 705 std::vector<float> &values,
Chris@449 706 QString label)
Chris@449 707 {
Chris@690 708 // SVDEBUG << "RDFImporterImpl::fillModel: adding point at frame " << ftime << endl;
Chris@492 709
Chris@1752 710 if (auto sodm = ModelById::getAs<SparseOneDimensionalModel>(modelId)) {
Chris@1658 711 Event point(ftime, label);
Chris@1658 712 sodm->add(point);
Chris@449 713 return;
Chris@449 714 }
Chris@449 715
Chris@1752 716 if (auto tm = ModelById::getAs<TextModel>(modelId)) {
Chris@1661 717 Event e
Chris@510 718 (ftime,
Chris@510 719 values.empty() ? 0.5f : values[0] < 0.f ? 0.f : values[0] > 1.f ? 1.f : values[0], // I was young and feckless once too
Chris@510 720 label);
Chris@1661 721 tm->add(e);
Chris@510 722 return;
Chris@510 723 }
Chris@510 724
Chris@1752 725 if (auto stvm = ModelById::getAs<SparseTimeValueModel>(modelId)) {
Chris@1651 726 Event e(ftime, values.empty() ? 0.f : values[0], label);
Chris@1651 727 stvm->add(e);
Chris@449 728 return;
Chris@449 729 }
Chris@449 730
Chris@1752 731 if (auto nm = ModelById::getAs<NoteModel>(modelId)) {
Chris@449 732 if (haveDuration) {
Chris@449 733 float value = 0.f, level = 1.f;
Chris@449 734 if (!values.empty()) {
Chris@449 735 value = values[0];
Chris@449 736 if (values.size() > 1) {
Chris@449 737 level = values[1];
Chris@449 738 }
Chris@449 739 }
Chris@1644 740 Event e(ftime, value, fduration, level, label);
Chris@1644 741 nm->add(e);
Chris@449 742 } else {
Chris@449 743 float value = 0.f, duration = 1.f, level = 1.f;
Chris@449 744 if (!values.empty()) {
Chris@449 745 value = values[0];
Chris@449 746 if (values.size() > 1) {
Chris@449 747 duration = values[1];
Chris@449 748 if (values.size() > 2) {
Chris@449 749 level = values[2];
Chris@449 750 }
Chris@449 751 }
Chris@449 752 }
Chris@1644 753 Event e(ftime, value, sv_frame_t(lrintf(duration)),
Chris@1643 754 level, label);
Chris@1644 755 nm->add(e);
Chris@449 756 }
Chris@449 757 return;
Chris@449 758 }
Chris@449 759
Chris@1752 760 if (auto rm = ModelById::getAs<RegionModel>(modelId)) {
Chris@617 761 float value = 0.f;
Chris@617 762 if (values.empty()) {
Chris@617 763 // no values? map each unique label to a distinct value
Chris@1752 764 if (m_labelValueMap[modelId].find(label) == m_labelValueMap[modelId].end()) {
Chris@1752 765 m_labelValueMap[modelId][label] = rm->getValueMaximum() + 1.f;
Chris@617 766 }
Chris@1752 767 value = m_labelValueMap[modelId][label];
Chris@617 768 } else {
Chris@617 769 value = values[0];
Chris@617 770 }
Chris@449 771 if (haveDuration) {
Chris@1649 772 Event e(ftime, value, fduration, label);
Chris@1649 773 rm->add(e);
Chris@449 774 } else {
Chris@449 775 // This won't actually happen -- we only create region models
Chris@449 776 // if we do have duration -- but just for completeness
Chris@617 777 float duration = 1.f;
Chris@449 778 if (!values.empty()) {
Chris@449 779 value = values[0];
Chris@449 780 if (values.size() > 1) {
Chris@449 781 duration = values[1];
Chris@449 782 }
Chris@449 783 }
Chris@1649 784 Event e(ftime, value, sv_frame_t(lrintf(duration)), label);
Chris@1649 785 rm->add(e);
Chris@449 786 }
Chris@449 787 return;
Chris@449 788 }
Chris@449 789
Chris@843 790 cerr << "WARNING: RDFImporterImpl::fillModel: Unknown or unexpected model type" << endl;
Chris@449 791 return;
Chris@449 792 }
Chris@449 793
Chris@490 794 RDFImporter::RDFDocumentType
Chris@1852 795 RDFImporter::identifyDocumentType(QUrl url)
Chris@490 796 {
Chris@490 797 bool haveAudio = false;
Chris@490 798 bool haveAnnotations = false;
Chris@726 799 bool haveRDF = false;
Chris@449 800
Chris@1852 801 if (!isPlausibleDocumentOfAnyKind(url)) {
Chris@1852 802 return NotRDF;
Chris@1852 803 }
Chris@1852 804
Chris@1582 805 BasicStore *store = nullptr;
Chris@1852 806
Chris@726 807 // This is not expected to return anything useful, but if it does
Chris@726 808 // anything at all then we know we have RDF
Chris@726 809 try {
Chris@1852 810 store = BasicStore::load(url);
Chris@730 811 Triple t = store->matchOnce(Triple());
Chris@726 812 if (t != Triple()) haveRDF = true;
Chris@1471 813 } catch (std::exception &) {
Chris@738 814 // nothing; haveRDF will be false so the next bit catches it
Chris@726 815 }
Chris@726 816
Chris@726 817 if (!haveRDF) {
Chris@726 818 delete store;
Chris@499 819 return NotRDF;
Chris@499 820 }
Chris@499 821
Chris@726 822 store->addPrefix("mo", Uri("http://purl.org/ontology/mo/"));
Chris@726 823 store->addPrefix("event", Uri("http://purl.org/NET/c4dm/event.owl#"));
Chris@726 824 store->addPrefix("af", Uri("http://purl.org/ontology/af/"));
Chris@726 825
Chris@588 826 // "MO-conformant" structure for audio files
Chris@588 827
Chris@730 828 Node n = store->complete(Triple(Node(), Uri("a"), store->expand("mo:AudioFile")));
Chris@726 829 if (n != Node() && n.type == Node::URI) {
Chris@588 830
Chris@490 831 haveAudio = true;
Chris@588 832
Chris@588 833 } else {
Chris@588 834
Chris@588 835 // Sonic Annotator v0.2 and below used to write this structure
Chris@588 836 // (which is not properly in conformance with the Music
Chris@588 837 // Ontology)
Chris@588 838
Chris@730 839 Nodes sigs = store->match(Triple(Node(), Uri("a"), store->expand("mo:Signal"))).subjects();
Chris@726 840 foreach (Node sig, sigs) {
Chris@730 841 Node aa = store->complete(Triple(sig, store->expand("mo:available_as"), Node()));
Chris@726 842 if (aa != Node()) {
Chris@726 843 haveAudio = true;
Chris@726 844 break;
Chris@726 845 }
Chris@588 846 }
Chris@490 847 }
Chris@490 848
Chris@690 849 SVDEBUG << "NOTE: RDFImporter::identifyDocumentType: haveAudio = "
Chris@687 850 << haveAudio << endl;
Chris@616 851
Chris@736 852 // can't call complete() with two Nothing nodes
Chris@736 853 n = store->matchOnce(Triple(Node(), store->expand("event:time"), Node())).c;
Chris@726 854 if (n != Node()) {
Chris@490 855 haveAnnotations = true;
Chris@490 856 }
Chris@490 857
Chris@490 858 if (!haveAnnotations) {
Chris@736 859 // can't call complete() with two Nothing nodes
Chris@736 860 n = store->matchOnce(Triple(Node(), store->expand("af:signal_feature"), Node())).c;
Chris@726 861 if (n != Node()) {
Chris@490 862 haveAnnotations = true;
Chris@490 863 }
Chris@490 864 }
Chris@490 865
Chris@690 866 SVDEBUG << "NOTE: RDFImporter::identifyDocumentType: haveAnnotations = "
Chris@687 867 << haveAnnotations << endl;
Chris@616 868
Chris@726 869 delete store;
Chris@542 870
Chris@490 871 if (haveAudio) {
Chris@490 872 if (haveAnnotations) {
Chris@490 873 return AudioRefAndAnnotations;
Chris@490 874 } else {
Chris@490 875 return AudioRef;
Chris@490 876 }
Chris@490 877 } else {
Chris@490 878 if (haveAnnotations) {
Chris@490 879 return Annotations;
Chris@490 880 } else {
Chris@499 881 return OtherRDFDocument;
Chris@490 882 }
Chris@490 883 }
Chris@492 884
Chris@542 885 return OtherRDFDocument;
Chris@490 886 }
Chris@490 887
Chris@1852 888 bool
Chris@1852 889 RDFImporter::isPlausibleDocumentOfAnyKind(QUrl url)
Chris@1852 890 {
Chris@1855 891 return TextTest::isApparentTextDocument(FileSource(url));
Chris@1852 892 }
Chris@1852 893