annotate src/fftw-3.3.3/doc/FAQ/fftw-faq.bfnn @ 127:7867fa7e1b6b

Current fftw source
author Chris Cannam <cannam@all-day-breakfast.com>
date Tue, 18 Oct 2016 13:40:26 +0100
parents 89f5e221ed7b
children
rev   line source
cannam@95 1 \comment This is the source for the FFTW FAQ list, in
cannam@95 2 \comment the Bizarre Format With No Name. It is turned into Lout
cannam@95 3 \comment input, HTML, plain ASCII and an Info document by a Perl script.
cannam@95 4 \comment
cannam@95 5 \comment The format and scripts come from the Linux FAQ, by
cannam@95 6 \comment Ian Jackson.
cannam@95 7 \set brieftitle FFTW FAQ
cannam@95 8 \set author <A href="http://www.fftw.org">Matteo Frigo and Steven G. Johnson</A> / <A href="mailto:fftw@fftw.org">fftw@fftw.org</A>
cannam@95 9 \set authormail fftw@fftw.org
cannam@95 10 \set title FFTW Frequently Asked Questions with Answers
cannam@95 11 \set copyholder Matteo Frigo and Massachusetts Institute of Technology
cannam@95 12 \call-html startup html.refs2
cannam@95 13 \copyto ASCII
cannam@95 14 FFTW FREQUENTLY ASKED QUESTIONS WITH ANSWERS
cannam@95 15 `date '+%d %h %Y'`
cannam@95 16 Matteo Frigo
cannam@95 17 Steven G. Johnson
cannam@95 18 <fftw@fftw.org>
cannam@95 19
cannam@95 20 \endcopy
cannam@95 21 \copyto INFO
cannam@95 22 START-INFO-DIR-ENTRY
cannam@95 23 * FFTW FAQ: (fftw-faq). FFTW Frequently Asked Questions with Answers.
cannam@95 24 END-INFO-DIR-ENTRY
cannam@95 25
cannam@95 26 
cannam@95 27 File: $prefix.info, Node: Top, Next: Question 1.1, Up: (dir)
cannam@95 28
cannam@95 29 FFTW FREQUENTLY ASKED QUESTIONS WITH ANSWERS
cannam@95 30 `date '+%d %h %Y'`
cannam@95 31 Matteo Frigo
cannam@95 32 Steven G. Johnson
cannam@95 33 <fftw@fftw.org>
cannam@95 34
cannam@95 35 \endcopy
cannam@95 36
cannam@95 37 This is the list of Frequently Asked Questions about FFTW, a
cannam@95 38 collection of fast C routines for computing the Discrete Fourier
cannam@95 39 Transform in one or more dimensions.
cannam@95 40
cannam@95 41 \section Index
cannam@95 42
cannam@95 43 \index
cannam@95 44
cannam@95 45 \comment ######################################################################
cannam@95 46
cannam@95 47 \section Introduction and General Information
cannam@95 48
cannam@95 49 \question 26aug:whatisfftw What is FFTW?
cannam@95 50
cannam@95 51 FFTW is a free collection of fast C routines for computing the
cannam@95 52 Discrete Fourier Transform in one or more dimensions. It includes
cannam@95 53 complex, real, symmetric, and parallel transforms, and can handle
cannam@95 54 arbitrary array sizes efficiently. FFTW is typically faster than
cannam@95 55 other publically-available FFT implementations, and is even
cannam@95 56 competitive with vendor-tuned libraries. (See our web page for
cannam@95 57 extensive benchmarks.) To achieve this performance, FFTW uses novel
cannam@95 58 code-generation and runtime self-optimization techniques (along with
cannam@95 59 many other tricks).
cannam@95 60
cannam@95 61 \question 26aug:whereisfftw How do I obtain FFTW?
cannam@95 62
cannam@95 63 FFTW can be found at \docref{the FFTW web page\}. You can also
cannam@95 64 retrieve it from \ftpon ftp.fftw.org in \ftpin /pub/fftw.
cannam@95 65
cannam@95 66 \question 26aug:isfftwfree Is FFTW free software?
cannam@95 67
cannam@95 68 Starting with version 1.3, FFTW is Free Software in the technical
cannam@95 69 sense defined by the Free Software Foundation (see \docref{Categories
cannam@95 70 of Free and Non-Free Software\}), and is distributed under the terms
cannam@95 71 of the GNU General Public License. Previous versions of FFTW were
cannam@95 72 distributed without fee for noncommercial use, but were not
cannam@95 73 technically ``free.''
cannam@95 74
cannam@95 75 Non-free licenses for FFTW are also available that permit different
cannam@95 76 terms of use than the GPL.
cannam@95 77
cannam@95 78 \question 10apr:nonfree What is this about non-free licenses?
cannam@95 79
cannam@95 80 The non-free licenses are for companies that wish to use FFTW in their
cannam@95 81 products but are unwilling to release their software under the GPL
cannam@95 82 (which would require them to release source code and allow free
cannam@95 83 redistribution). Such users can purchase an unlimited-use license
cannam@95 84 from MIT. Contact us for more details.
cannam@95 85
cannam@95 86 We could instead have released FFTW under the LGPL, or even disallowed
cannam@95 87 non-Free usage. Suffice it to say, however, that MIT owns the
cannam@95 88 copyright to FFTW and they only let us GPL it because we convinced
cannam@95 89 them that it would neither affect their licensing revenue nor irritate
cannam@95 90 existing licensees.
cannam@95 91
cannam@95 92 \question 24oct:west In the West? I thought MIT was in the East?
cannam@95 93
cannam@95 94 Not to an Italian. You could say that we're a Spaghetti Western
cannam@95 95 (with apologies to Sergio Leone).
cannam@95 96
cannam@95 97 \comment ######################################################################
cannam@95 98
cannam@95 99 \section Installing FFTW
cannam@95 100
cannam@95 101 \question 26aug:systems Which systems does FFTW run on?
cannam@95 102
cannam@95 103 FFTW is written in ANSI C, and should work on any system with a decent
cannam@95 104 C compiler. (See also \qref runOnWindows, \qref compilerCrashes.)
cannam@95 105 FFTW can also take advantage of certain hardware-specific features,
cannam@95 106 such as cycle counters and SIMD instructions, but this is optional.
cannam@95 107
cannam@95 108 \question 26aug:runOnWindows Does FFTW run on Windows?
cannam@95 109
cannam@95 110 Yes, many people have reported successfully using FFTW on Windows with
cannam@95 111 various compilers. FFTW was not developed on Windows, but the source
cannam@95 112 code is essentially straight ANSI C. See also the \docref{FFTW
cannam@95 113 Windows installation notes\}, \qref compilerCrashes, and \qref
cannam@95 114 vbetalia.
cannam@95 115
cannam@95 116 \question 26aug:compilerCrashes My compiler has trouble with FFTW.
cannam@95 117
cannam@95 118 Complain fiercely to the vendor of the compiler.
cannam@95 119
cannam@95 120 We have successfully used \courier{gcc\} 3.2.x on x86 and PPC, a
cannam@95 121 recent Compaq C compiler for Alpha, version 6 of IBM's \courier{xlc\}
cannam@95 122 compiler for AIX, Intel's \courier{icc\} versions 5-7, and Sun
cannam@95 123 WorkShop \courier{cc\} version 6.
cannam@95 124
cannam@95 125 FFTW is likely to push compilers to their limits, however, and several
cannam@95 126 compiler bugs have been exposed by FFTW. A partial list follows.
cannam@95 127
cannam@95 128 \courier{gcc\} 2.95.x for Solaris/SPARC produces incorrect code for
cannam@95 129 the test program (workaround: recompile the \courier{libbench2\}
cannam@95 130 directory with \courier{-O2\}).
cannam@95 131
cannam@95 132 NetBSD/macppc 1.6 comes with a \courier{gcc\} version that also
cannam@95 133 miscompiles the test program. (Please report a workaround if you know
cannam@95 134 one.)
cannam@95 135
cannam@95 136 \courier{gcc\} 3.2.3 for ARM reportedly crashes during compilation.
cannam@95 137 This bug is reportedly fixed in later versions of \courier{gcc\}.
cannam@95 138
cannam@95 139 Versions 8.0 and 8.1 of Intel's \courier{icc\} falsely claim to be
cannam@95 140 \courier{gcc\}, so you should specify \courier{CC="icc -no-gcc"\};
cannam@95 141 this is automatic in FFTW 3.1. \courier{icc-8.0.066\} reportely
cannam@95 142 produces incorrect code for FFTW 2.1.5, but is fixed in version 8.1.
cannam@95 143 \courier{icc-7.1\} compiler build 20030402Z appears to produce
cannam@95 144 incorrect dependencies, causing the compilation to fail.
cannam@95 145 \courier{icc-7.1\} build 20030307Z appears to work fine. (Use
cannam@95 146 \courier{icc -V\} to check which build you have.) As of 2003/04/18,
cannam@95 147 build 20030402Z appears not to be available any longer on Intel's
cannam@95 148 website, whereas the older build 20030307Z is available.
cannam@95 149
cannam@95 150 \courier{ranlib\} of GNU \courier{binutils\} 2.9.1 on Irix has been
cannam@95 151 observed to corrupt the FFTW libraries, causing a link failure when
cannam@95 152 FFTW is compiled. Since \courier{ranlib\} is completely superfluous
cannam@95 153 on Irix, we suggest deleting it from your system and replacing it with
cannam@95 154 a symbolic link to \courier{/bin/echo\}.
cannam@95 155
cannam@95 156 If support for SIMD instructions is enabled in FFTW, further compiler
cannam@95 157 problems may appear:
cannam@95 158
cannam@95 159 \courier{gcc\} 3.4.[0123] for x86 produces incorrect SSE2 code for
cannam@95 160 FFTW when \courier{-O2\} (the best choice for FFTW) is used, causing
cannam@95 161 FFTW to crash (\courier{make check\} crashes). This bug is fixed in
cannam@95 162 \courier{gcc\} 3.4.4. On x86_64 (amd64/em64t), \courier{gcc\} 3.4.4
cannam@95 163 reportedly still has a similar problem, but this is fixed as of
cannam@95 164 \courier{gcc\} 3.4.6.
cannam@95 165
cannam@95 166 \courier{gcc-3.2\} for x86 produces incorrect SIMD code if
cannam@95 167 \courier{-O3\} is used. The same compiler produces incorrect SIMD
cannam@95 168 code if no optimization is used, too. When using \courier{gcc-3.2\},
cannam@95 169 it is a good idea not to change the default \courier{CFLAGS\} selected
cannam@95 170 by the \courier{configure\} script.
cannam@95 171
cannam@95 172 Some 3.0.x and 3.1.x versions of \courier{gcc\} on \courier{x86\} may
cannam@95 173 crash. \courier{gcc\} so-called 2.96 shipping with RedHat 7.3 crashes
cannam@95 174 when compiling SIMD code. In both cases, please upgrade to
cannam@95 175 \courier{gcc-3.2\} or later.
cannam@95 176
cannam@95 177 Intel's \courier{icc\} 6.0 misaligns SSE constants, but FFTW has a
cannam@95 178 workaround. \courier{icc\} 8.x fails to compile FFTW 3.0.x because it
cannam@95 179 falsely claims to be \courier{gcc\}; we believe this to be a bug in
cannam@95 180 \courier{icc\}, but FFTW 3.1 has a workaround.
cannam@95 181
cannam@95 182 Visual C++ 2003 reportedly produces incorrect code for SSE/SSE2 when
cannam@95 183 compiling FFTW. This bug was reportedly fixed in VC++ 2005;
cannam@95 184 alternatively, you could switch to the Intel compiler. VC++ 6.0 also
cannam@95 185 reportedly produces incorrect code for the file
cannam@95 186 \courier{reodft11e-r2hc-odd.c\} unless optimizations are disabled for
cannam@95 187 that file.
cannam@95 188
cannam@95 189 \courier{gcc\} 2.95 on MacOS X miscompiles AltiVec code (fixed in
cannam@95 190 later versions). \courier{gcc\} 3.2.x miscompiles AltiVec
cannam@95 191 permutations, but FFTW has a workaround. \courier{gcc\} 4.0.1 on
cannam@95 192 MacOS for Intel crashes when compiling FFTW; a workaround is to
cannam@95 193 compile one file without optimization: \courier{cd kernel; make
cannam@95 194 CFLAGS=" " trig.lo\}.
cannam@95 195
cannam@95 196 \courier{gcc\} 4.1.1 reportedly crashes when compiling FFTW for MIPS;
cannam@95 197 the workaround is to compile the file it crashes on
cannam@95 198 (\courier{t2_64.c\}) with a lower optimization level.
cannam@95 199
cannam@95 200 \courier{gcc\} versions 4.1.2 to 4.2.0 for x86 reportedly miscompile
cannam@95 201 FFTW 3.1's test program, causing \courier{make check\} to crash
cannam@95 202 (\courier{gcc\} bug #26528). The bug was reportedly fixed in
cannam@95 203 \courier{gcc\} version 4.2.1 and later. A workaround is to compile
cannam@95 204 \courier{libbench2/verify-lib.c\} without optimization.
cannam@95 205
cannam@95 206 \question 26aug:solarisSucks FFTW does not compile on Solaris, complaining about \courier{const\}.
cannam@95 207
cannam@95 208 We know that at least on Solaris 2.5.x with Sun's compilers 4.2 you
cannam@95 209 might get error messages from \courier{make\} such as
cannam@95 210
cannam@95 211 \courier{"./fftw.h", line 88: warning: const is a keyword in ANSI C\}
cannam@95 212
cannam@95 213 This is the case when the \courier{configure\} script reports that
cannam@95 214 \courier{const\} does not work:
cannam@95 215
cannam@95 216 \courier{checking for working const... (cached) no\}
cannam@95 217
cannam@95 218 You should be aware that Solaris comes with two compilers, namely,
cannam@95 219 \courier{/opt/SUNWspro/SC4.2/bin/cc\} and \courier{/usr/ucb/cc\}. The
cannam@95 220 latter compiler is non-ANSI. Indeed, it is a perverse shell script
cannam@95 221 that calls the real compiler in non-ANSI mode. In order
cannam@95 222 to compile FFTW, change your path so that the right \courier{cc\}
cannam@95 223 is used.
cannam@95 224
cannam@95 225 To know whether your compiler is the right one, type
cannam@95 226 \courier{cc -V\}. If the compiler prints ``\courier{ucbcc\}'',
cannam@95 227 as in
cannam@95 228
cannam@95 229 \courier{ucbcc: WorkShop Compilers 4.2 30 Oct 1996 C 4.2\}
cannam@95 230
cannam@95 231 then the compiler is wrong. The right message is something like
cannam@95 232
cannam@95 233 \courier{cc: WorkShop Compilers 4.2 30 Oct 1996 C 4.2\}
cannam@95 234
cannam@95 235 \question 19mar:3dnow What's the difference between \courier{--enable-3dnow\} and \courier{--enable-k7\}?
cannam@95 236
cannam@95 237 \courier{--enable-k7\} enables 3DNow! instructions on K7 processors
cannam@95 238 (AMD Athlon and its variants). K7 support is provided by assembly
cannam@95 239 routines generated by a special purpose compiler.
cannam@95 240 As of fftw-3.2, --enable-k7 is no longer supported.
cannam@95 241
cannam@95 242 \courier{--enable-3dnow\} enables generic 3DNow! support using
cannam@95 243 \courier{gcc\} builtin functions. This works on earlier AMD
cannam@95 244 processors, but it is not as fast as our special assembly routines.
cannam@95 245 As of fftw-3.1, --enable-3dnow is no longer supported.
cannam@95 246
cannam@95 247 \question 18apr:fma What's the difference between the fma and the non-fma versions?
cannam@95 248
cannam@95 249 The fma version tries to exploit the fused multiply-add instructions
cannam@95 250 implemented in many processors such as PowerPC, ia-64, and MIPS. The
cannam@95 251 two FFTW packages are otherwise identical. In FFTW 3.1, the fma and
cannam@95 252 non-fma versions were merged together into a single package, and the
cannam@95 253 \courier{configure\} script attempts to automatically guess which
cannam@95 254 version to use.
cannam@95 255
cannam@95 256 The FFTW 3.1 \courier{configure\} script enables fma by default on
cannam@95 257 PowerPC, Itanium, and PA-RISC, and disables it otherwise. You can
cannam@95 258 force one or the other by using the \courier{--enable-fma\} or
cannam@95 259 \courier{--disable-fma\} flag for \courier{configure\}.
cannam@95 260
cannam@95 261 Definitely use fma if you have a PowerPC-based system with
cannam@95 262 \courier{gcc\} (or IBM \courier{xlc\}). This includes all GNU/Linux
cannam@95 263 systems for PowerPC and the older PowerPC-based MacOS systems. Also
cannam@95 264 use it on PA-RISC and Itanium with the HP/UX compiler.
cannam@95 265
cannam@95 266 Definitely do not use the fma version if you have an ia-32 processor
cannam@95 267 (Intel, AMD, MacOS on Intel, etcetera).
cannam@95 268
cannam@95 269 For other architectures/compilers, the situation is not so clear. For
cannam@95 270 example, ia-64 has the fma instruction, but \courier{gcc-3.2\} appears
cannam@95 271 not to exploit it correctly. Other compilers may do the right thing,
cannam@95 272 but we have not tried them. Please send us your feedback so that we
cannam@95 273 can update this FAQ entry.
cannam@95 274
cannam@95 275 \question 26aug:languages Which language is FFTW written in?
cannam@95 276
cannam@95 277 FFTW is written in ANSI C. Most of the code, however, was
cannam@95 278 automatically generated by a program called \courier{genfft\}, written
cannam@95 279 in the Objective Caml dialect of ML. You do not need to know ML or to
cannam@95 280 have an Objective Caml compiler in order to use FFTW.
cannam@95 281
cannam@95 282 \courier{genfft\} is provided with the FFTW sources, which means that
cannam@95 283 you can play with the code generator if you want. In this case, you
cannam@95 284 need a working Objective Caml system. Objective Caml is available
cannam@95 285 from \docref{the Caml web page\}.
cannam@95 286
cannam@95 287 \question 26aug:fortran Can I call FFTW from Fortran?
cannam@95 288
cannam@95 289 Yes, FFTW (versions 1.3 and higher) contains a Fortran-callable
cannam@95 290 interface, documented in the FFTW manual.
cannam@95 291
cannam@95 292 By default, FFTW configures its Fortran interface to work with the
cannam@95 293 first compiler it finds, e.g. \courier{g77\}. To configure for a
cannam@95 294 different, incompatible Fortran compiler \courier{foobar\}, use
cannam@95 295 \courier{./configure F77=foobar\} when installing FFTW. (In the case
cannam@95 296 of \courier{g77\}, however, FFTW 3.x also includes an extra set of
cannam@95 297 Fortran-callable routines with one less underscore at the end of
cannam@95 298 identifiers, which should cover most other Fortran compilers on Linux
cannam@95 299 at least.)
cannam@95 300
cannam@95 301 \question 26aug:cplusplus Can I call FFTW from C++?
cannam@95 302
cannam@95 303 Most definitely. FFTW should compile and/or link under any C++
cannam@95 304 compiler. Moreover, it is likely that the C++ \courier{<complex>\}
cannam@95 305 template class is bit-compatible with FFTW's complex-number format
cannam@95 306 (see the FFTW manual for more details).
cannam@95 307
cannam@95 308 \question 26aug:whynotfortran Why isn't FFTW written in Fortran/C++?
cannam@95 309
cannam@95 310 Because we don't like those languages, and neither approaches the
cannam@95 311 portability of C.
cannam@95 312
cannam@95 313 \question 29mar:singleprec How do I compile FFTW to run in single precision?
cannam@95 314
cannam@95 315 On a Unix system: \courier{configure --enable-float\}. On a non-Unix
cannam@95 316 system: edit \courier{config.h\} to \courier{#define\} the symbol
cannam@95 317 \courier{FFTW_SINGLE\} (for FFTW 3.x). In both cases, you must then
cannam@95 318 recompile FFTW. In FFTW 3, all FFTW identifiers will then begin with
cannam@95 319 \courier{fftwf_\} instead of \courier{fftw_\}.
cannam@95 320
cannam@95 321 \question 28mar:64bitk7 --enable-k7 does not work on x86-64
cannam@95 322
cannam@95 323 Support for --enable-k7 was discontinued in fftw-3.2.
cannam@95 324
cannam@95 325 The fftw-3.1 release supports --enable-k7. This option only works on
cannam@95 326 32-bit x86 machines that implement 3DNow!, including the AMD Athlon
cannam@95 327 and the AMD Opteron in 32-bit mode. --enable-k7 does not work on AMD
cannam@95 328 Opteron in 64-bit mode. Use --enable-sse for x86-64 machines.
cannam@95 329
cannam@95 330 FFTW supports 3DNow! by means of assembly code generated by a
cannam@95 331 special-purpose compiler. It is hard to produce assembly code that
cannam@95 332 works in both 32-bit and 64-bit mode.
cannam@95 333
cannam@95 334 \comment ######################################################################
cannam@95 335
cannam@95 336 \section Using FFTW
cannam@95 337
cannam@95 338 \question 15mar:fftw2to3 Why not support the FFTW 2 interface in FFTW 3?
cannam@95 339
cannam@95 340 FFTW 3 has semantics incompatible with earlier versions: its plans can
cannam@95 341 only be used for a given stride, multiplicity, and other
cannam@95 342 characteristics of the input and output arrays; these stronger
cannam@95 343 semantics are necessary for performance reasons. Thus, it is
cannam@95 344 impossible to efficiently emulate the older interface (whose plans can
cannam@95 345 be used for any transform of the same size). We believe that it
cannam@95 346 should be possible to upgrade most programs without any difficulty,
cannam@95 347 however.
cannam@95 348
cannam@95 349 \question 20mar:planperarray Why do FFTW 3 plans encapsulate the input/output arrays and not just the algorithm?
cannam@95 350
cannam@95 351 There are several reasons:
cannam@95 352
cannam@95 353 \call startlist
cannam@95 354 \call item
cannam@95 355 It was important for performance reasons that the plan be specific to
cannam@95 356 array characteristics like the stride (and alignment, for SIMD), and
cannam@95 357 requiring that the user maintain these invariants is error prone.
cannam@95 358 \call item
cannam@95 359 In most high-performance applications, as far as we can tell, you are
cannam@95 360 usually transforming the same array over and over, so FFTW's semantics
cannam@95 361 should not be a burden.
cannam@95 362 \call item
cannam@95 363 If you need to transform another array of the same size, creating a
cannam@95 364 new plan once the first exists is a cheap operation.
cannam@95 365 \call item
cannam@95 366 If you need to transform many arrays of the same size at once, you
cannam@95 367 should really use the \courier{plan_many\} routines in FFTW's "advanced"
cannam@95 368 interface.
cannam@95 369 \call item
cannam@95 370 If the abovementioned array characteristics are the same, you are
cannam@95 371 willing to pay close attention to the documentation, and you really
cannam@95 372 need to, we provide a "new-array execution" interface to apply a plan
cannam@95 373 to a new array.
cannam@95 374 \call endlist
cannam@95 375
cannam@95 376 \question 25may:slow FFTW seems really slow.
cannam@95 377
cannam@95 378 You are probably recreating the plan before every transform, rather
cannam@95 379 than creating it once and reusing it for all transforms of the same
cannam@95 380 size. FFTW is designed to be used in the following way:
cannam@95 381
cannam@95 382 \call startlist
cannam@95 383 \call item
cannam@95 384 First, you create a plan. This will take several seconds.
cannam@95 385 \call item
cannam@95 386 Then, you reuse the plan many times to perform FFTs. These are fast.
cannam@95 387 \call endlist
cannam@95 388
cannam@95 389 If you don't need to compute many transforms and the time for the
cannam@95 390 planner is significant, you have two options. First, you can use the
cannam@95 391 \courier{FFTW_ESTIMATE\} option in the planner, which uses heuristics
cannam@95 392 instead of runtime measurements and produces a good plan in a short
cannam@95 393 time. Second, you can use the wisdom feature to precompute the plan;
cannam@95 394 see \qref savePlans
cannam@95 395
cannam@95 396 \question 22oct:slows FFTW slows down after repeated calls.
cannam@95 397
cannam@95 398 Probably, NaNs or similar are creeping into your data, and the
cannam@95 399 slowdown is due to the resulting floating-point exceptions. For
cannam@95 400 example, be aware that repeatedly FFTing the same array is a diverging
cannam@95 401 process (because FFTW computes the unnormalized transform).
cannam@95 402
cannam@95 403 \question 22oct:segfault An FFTW routine is crashing when I call it.
cannam@95 404
cannam@95 405 Did the FFTW test programs pass (\courier{make check\}, or \courier{cd
cannam@95 406 tests; make bigcheck\} if you want to be paranoid)? If so, you almost
cannam@95 407 certainly have a bug in your own code. For example, you could be
cannam@95 408 passing invalid arguments (such as wrongly-sized arrays) to FFTW, or
cannam@95 409 you could simply have memory corruption elsewhere in your program that
cannam@95 410 causes random crashes later on. Please don't complain to us unless
cannam@95 411 you can come up with a minimal self-contained program (preferably
cannam@95 412 under 30 lines) that illustrates the problem.
cannam@95 413
cannam@95 414 \question 22oct:fortran64 My Fortran program crashes when calling FFTW.
cannam@95 415
cannam@95 416 As described in the manual, on 64-bit machines you must store the
cannam@95 417 plans in variables large enough to hold a pointer, for example
cannam@95 418 \courier{integer*8\}. We recommend using \courier{integer*8\} on
cannam@95 419 32-bit machines as well, to simplify porting.
cannam@95 420
cannam@95 421 \question 24mar:conventions FFTW gives results different from my old FFT.
cannam@95 422
cannam@95 423 People follow many different conventions for the DFT, and you should
cannam@95 424 be sure to know the ones that we use (described in the FFTW manual).
cannam@95 425 In particular, you should be aware that the
cannam@95 426 \courier{FFTW_FORWARD\}/\courier{FFTW_BACKWARD\} directions correspond
cannam@95 427 to signs of -1/+1 in the exponent of the DFT definition.
cannam@95 428 (\italic{Numerical Recipes\} uses the opposite convention.)
cannam@95 429
cannam@95 430 You should also know that we compute an unnormalized transform. In
cannam@95 431 contrast, Matlab is an example of program that computes a normalized
cannam@95 432 transform. See \qref whyscaled.
cannam@95 433
cannam@95 434 Finally, note that floating-point arithmetic is not exact, so
cannam@95 435 different FFT algorithms will give slightly different results (on the
cannam@95 436 order of the numerical accuracy; typically a fractional difference of
cannam@95 437 1e-15 or so in double precision).
cannam@95 438
cannam@95 439 \question 31aug:nondeterministic FFTW gives different results between runs
cannam@95 440
cannam@95 441 If you use \courier{FFTW_MEASURE\} or \courier{FFTW_PATIENT\} mode,
cannam@95 442 then the algorithm FFTW employs is not deterministic: it depends on
cannam@95 443 runtime performance measurements. This will cause the results to vary
cannam@95 444 slightly from run to run. However, the differences should be slight,
cannam@95 445 on the order of the floating-point precision, and therefore should
cannam@95 446 have no practical impact on most applications.
cannam@95 447
cannam@95 448 If you use saved plans (wisdom) or \courier{FFTW_ESTIMATE\} mode,
cannam@95 449 however, then the algorithm is deterministic and the results should be
cannam@95 450 identical between runs.
cannam@95 451
cannam@95 452 \question 26aug:savePlans Can I save FFTW's plans?
cannam@95 453
cannam@95 454 Yes. Starting with version 1.2, FFTW provides the \courier{wisdom\}
cannam@95 455 mechanism for saving plans; see the FFTW manual.
cannam@95 456
cannam@95 457 \question 14sep:whyscaled Why does your inverse transform return a scaled result?
cannam@95 458
cannam@95 459 Computing the forward transform followed by the backward transform (or
cannam@95 460 vice versa) yields the original array scaled by the size of the array.
cannam@95 461 (For multi-dimensional transforms, the size of the array is the
cannam@95 462 product of the dimensions.) We could, instead, have chosen a
cannam@95 463 normalization that would have returned the unscaled array. Or, to
cannam@95 464 accomodate the many conventions in this matter, the transform routines
cannam@95 465 could have accepted a "scale factor" parameter. We did not do this,
cannam@95 466 however, for two reasons. First, we didn't want to sacrifice
cannam@95 467 performance in the common case where the scale factor is 1. Second, in
cannam@95 468 real applications the FFT is followed or preceded by some computation
cannam@95 469 on the data, into which the scale factor can typically be absorbed at
cannam@95 470 little or no cost.
cannam@95 471
cannam@95 472 \question 02dec:centerorigin How can I make FFTW put the origin (zero frequency) at the center of its output?
cannam@95 473
cannam@95 474 For human viewing of a spectrum, it is often convenient to put the
cannam@95 475 origin in frequency space at the center of the output array, rather
cannam@95 476 than in the zero-th element (the default in FFTW). If all of the
cannam@95 477 dimensions of your array are even, you can accomplish this by simply
cannam@95 478 multiplying each element of the input array by (-1)^(i + j + ...),
cannam@95 479 where i, j, etcetera are the indices of the element. (This trick is a
cannam@95 480 general property of the DFT, and is not specific to FFTW.)
cannam@95 481
cannam@95 482 \question 08may:imageaudio How do I FFT an image/audio file in \italic{foobar\} format?
cannam@95 483
cannam@95 484 FFTW performs an FFT on an array of floating-point values. You can
cannam@95 485 certainly use it to compute the transform of an image or audio stream,
cannam@95 486 but you are responsible for figuring out your data format and
cannam@95 487 converting it to the form FFTW requires.
cannam@95 488
cannam@95 489 \question 09apr:linkfails My program does not link (on Unix).
cannam@95 490
cannam@95 491 The libraries must be listed in the correct order (\courier{-lfftw3
cannam@95 492 -lm\} for FFTW 3.x) and \italic{after\} your program sources/objects.
cannam@95 493 (The general rule is that if \italic{A\} uses \italic{B\}, then
cannam@95 494 \italic{A\} must be listed before \italic{B\} in the link command.).
cannam@95 495
cannam@95 496 \question 15mar:linkheader I included your header, but linking still fails.
cannam@95 497
cannam@95 498 You're a C++ programmer, aren't you? You have to compile the FFTW
cannam@95 499 library and link it into your program, not just \courier{#include
cannam@95 500 <fftw3.h>\}. (Yes, this is really a FAQ.)
cannam@95 501
cannam@95 502 \question 22oct:nostack My program crashes, complaining about stack space.
cannam@95 503
cannam@95 504 You cannot declare large arrays with automatic storage (e.g. via
cannam@95 505 \courier{fftw_complex array[N]\}); you should use
cannam@95 506 \courier{fftw_malloc\} (or equivalent) to allocate the arrays you want
cannam@95 507 to transform if they are larger than a few hundred elements.
cannam@95 508
cannam@95 509 \question 13may:leaks FFTW seems to have a memory leak.
cannam@95 510
cannam@95 511 After you create a plan, FFTW caches the information required to
cannam@95 512 quickly recreate the plan. (See \qref savePlans) It also maintains a
cannam@95 513 small amount of other persistent memory. You can deallocate all of
cannam@95 514 FFTW's internally allocated memory, if you wish, by calling
cannam@95 515 \courier{fftw_cleanup()\}, as documented in the manual.
cannam@95 516
cannam@95 517 \question 16may:allzero The output of FFTW's transform is all zeros.
cannam@95 518
cannam@95 519 You should initialize your input array \italic{after\} creating the
cannam@95 520 plan, unless you use \courier{FFTW_ESTIMATE\}: planning with
cannam@95 521 \courier{FFTW_MEASURE\} or \courier{FFTW_PATIENT\} overwrites the
cannam@95 522 input/output arrays, as described in the manual.
cannam@95 523
cannam@95 524 \question 05sep:vbetalia How do I call FFTW from the Microsoft language du jour?
cannam@95 525
cannam@95 526 Please \italic{do not\} ask us Windows-specific questions. We do not
cannam@95 527 use Windows. We know nothing about Visual Basic, Visual C++, or .NET.
cannam@95 528 Please find the appropriate Usenet discussion group and ask your
cannam@95 529 question there. See also \qref runOnWindows.
cannam@95 530
cannam@95 531 \question 15oct:pruned Can I compute only a subset of the DFT outputs?
cannam@95 532
cannam@95 533 In general, no, an FFT intrinsically computes all outputs from all
cannam@95 534 inputs. In principle, there is something called a \italic{pruned
cannam@95 535 FFT\} that can do what you want, but to compute K outputs out of N the
cannam@95 536 complexity is in general O(N log K) instead of O(N log N), thus saving
cannam@95 537 only a small additive factor in the log. (The same argument holds if
cannam@95 538 you instead have only K nonzero inputs.)
cannam@95 539
cannam@95 540 There are some specific cases in which you can get the O(N log K)
cannam@95 541 performance benefits easily, however, by combining a few ordinary
cannam@95 542 FFTs. In particular, the case where you want the first K outputs,
cannam@95 543 where K divides N, can be handled by performing N/K transforms of size
cannam@95 544 K and then summing the outputs multiplied by appropriate phase
cannam@95 545 factors. For more details, see \docref{pruned FFTs with FFTW\}.
cannam@95 546
cannam@95 547 There are also some algorithms that compute pruned transforms
cannam@95 548 \italic{approximately\}, but they are beyond the scope of this FAQ.
cannam@95 549
cannam@95 550 \question 21jan:transpose Can I use FFTW's routines for in-place and out-of-place matrix transposition?
cannam@95 551
cannam@95 552 You can use the FFTW guru interface to create a rank-0 transform of
cannam@95 553 vector rank 2 where the vector strides are transposed. (A rank-0
cannam@95 554 transform is equivalent to a 1D transform of size 1, which. just
cannam@95 555 copies the input into the output.) Specifying the same location for
cannam@95 556 the input and output makes the transpose in-place.
cannam@95 557
cannam@95 558 For double-valued data stored in row-major format, plan creation looks like
cannam@95 559 this:
cannam@95 560
cannam@95 561 \verbatim
cannam@95 562 fftw_plan plan_transpose(int rows, int cols, double *in, double *out)
cannam@95 563 {
cannam@95 564 const unsigned flags = FFTW_ESTIMATE; /* other flags are possible */
cannam@95 565 fftw_iodim howmany_dims[2];
cannam@95 566
cannam@95 567 howmany_dims[0].n = rows;
cannam@95 568 howmany_dims[0].is = cols;
cannam@95 569 howmany_dims[0].os = 1;
cannam@95 570
cannam@95 571 howmany_dims[1].n = cols;
cannam@95 572 howmany_dims[1].is = 1;
cannam@95 573 howmany_dims[1].os = rows;
cannam@95 574
cannam@95 575 return fftw_plan_guru_r2r(/*rank=*/ 0, /*dims=*/ NULL,
cannam@95 576 /*howmany_rank=*/ 2, howmany_dims,
cannam@95 577 in, out, /*kind=*/ NULL, flags);
cannam@95 578 }
cannam@95 579 \endverbatim
cannam@95 580
cannam@95 581 (This entry was written by Rhys Ulerich.)
cannam@95 582
cannam@95 583 \comment ######################################################################
cannam@95 584
cannam@95 585 \section Internals of FFTW
cannam@95 586
cannam@95 587 \question 26aug:howworks How does FFTW work?
cannam@95 588
cannam@95 589 The innovation (if it can be so called) in FFTW consists in having a
cannam@95 590 variety of composable \italic{solvers\}, representing different FFT
cannam@95 591 algorithms and implementation strategies, whose combination into a
cannam@95 592 particular \italic{plan\} for a given size can be determined at
cannam@95 593 runtime according to the characteristics of your machine/compiler.
cannam@95 594 This peculiar software architecture allows FFTW to adapt itself to
cannam@95 595 almost any machine.
cannam@95 596
cannam@95 597 For more details (albeit somewhat outdated), see the paper "FFTW: An
cannam@95 598 Adaptive Software Architecture for the FFT", by M. Frigo and
cannam@95 599 S. G. Johnson, \italic{Proc. ICASSP\} 3, 1381 (1998), also
cannam@95 600 available at \docref{the FFTW web page\}.
cannam@95 601
cannam@95 602 \question 26aug:whyfast Why is FFTW so fast?
cannam@95 603
cannam@95 604 This is a complex question, and there is no simple answer. In fact,
cannam@95 605 the authors do not fully know the answer, either. In addition to many
cannam@95 606 small performance hacks throughout FFTW, there are three general
cannam@95 607 reasons for FFTW's speed.
cannam@95 608
cannam@95 609 \call startlist
cannam@95 610 \call item
cannam@95 611 FFTW uses a variety of FFT algorithms and implementation styles
cannam@95 612 that can be arbitrarily composed to adapt itself to
cannam@95 613 a machine. See \qref howworks.
cannam@95 614 \call item
cannam@95 615 FFTW uses a code generator to produce highly-optimized
cannam@95 616 routines for computing small transforms.
cannam@95 617 \call item
cannam@95 618 FFTW uses explicit divide-and-conquer to take advantage
cannam@95 619 of the memory hierarchy.
cannam@95 620 \call endlist
cannam@95 621
cannam@95 622 For more details (albeit somewhat outdated), see the paper "FFTW: An
cannam@95 623 Adaptive Software Architecture for the FFT", by M. Frigo and
cannam@95 624 S. G. Johnson, \italic{Proc. ICASSP\} 3, 1381 (1998),
cannam@95 625 available along with other references at \docref{the FFTW web page\}.
cannam@95 626
cannam@95 627 \comment ######################################################################
cannam@95 628
cannam@95 629 \section Known bugs
cannam@95 630
cannam@95 631 \question 27aug:rfftwndbug FFTW 1.1 crashes in rfftwnd on Linux.
cannam@95 632
cannam@95 633 This bug was fixed in FFTW 1.2. There was a bug in \courier{rfftwnd\}
cannam@95 634 causing an incorrect amount of memory to be allocated. The bug showed
cannam@95 635 up in Linux with libc-5.3.12 (and nowhere else that we know of).
cannam@95 636
cannam@95 637 \question 15oct:fftwmpibug The MPI transforms in FFTW 1.2 give incorrect results/leak memory.
cannam@95 638
cannam@95 639 These bugs were corrected in FFTW 1.2.1. The MPI transforms (really,
cannam@95 640 just the transpose routines) in FFTW 1.2 had bugs that could cause
cannam@95 641 errors in some situations.
cannam@95 642
cannam@95 643 \question 05nov:testsingbug The test programs in FFTW 1.2.1 fail when I change FFTW to use single precision.
cannam@95 644
cannam@95 645 This bug was fixed in FFTW 1.3. (Older versions of FFTW did
cannam@95 646 work in single precision, but the test programs didn't--the error
cannam@95 647 tolerances in the tests were set for double precision.)
cannam@95 648
cannam@95 649 \question 24mar:teststoobig The test program in FFTW 1.2.1 fails for n > 46340.
cannam@95 650
cannam@95 651 This bug was fixed in FFTW 1.3. FFTW 1.2.1 produced the right answer,
cannam@95 652 but the test program was wrong. For large n, n*n in the naive
cannam@95 653 transform that we used for comparison overflows 32 bit integer
cannam@95 654 precision, breaking the test.
cannam@95 655
cannam@95 656 \question 24aug:linuxthreads The threaded code fails on Linux Redhat 5.0
cannam@95 657
cannam@95 658 We had problems with glibc-2.0.5. The code should work with
cannam@95 659 glibc-2.0.7.
cannam@95 660
cannam@95 661 \question 26sep:bigrfftwnd FFTW 2.0's rfftwnd fails for rank > 1 transforms with a final dimension >= 65536.
cannam@95 662
cannam@95 663 This bug was fixed in FFTW 2.0.1. (There was a 32-bit integer overflow due
cannam@95 664 to a poorly-parenthesized expression.)
cannam@95 665
cannam@95 666 \question 26mar:primebug FFTW 2.0's complex transforms give the wrong results with prime factors 17 to 97.
cannam@95 667
cannam@95 668 There was a bug in the complex transforms that could cause incorrect
cannam@95 669 results under (hopefully rare) circumstances for lengths with
cannam@95 670 intermediate-size prime factors (17-97). This bug was fixed in FFTW
cannam@95 671 2.1.1.
cannam@95 672
cannam@95 673 \question 05apr:mpichbug FFTW 2.1.1's MPI test programs crash with MPICH.
cannam@95 674
cannam@95 675 This bug was fixed in FFTW 2.1.2. The 2.1/2.1.1 MPI test programs crashed
cannam@95 676 when using the MPICH implementation of MPI with the \courier{ch_p4\}
cannam@95 677 device (TCP/IP); the transforms themselves worked fine.
cannam@95 678
cannam@95 679 \question 25may:aixthreadbug FFTW 2.1.2's multi-threaded transforms don't work on AIX.
cannam@95 680
cannam@95 681 This bug was fixed in FFTW 2.1.3. The multi-threaded transforms in
cannam@95 682 previous versions didn't work with AIX's \courier{pthreads\}
cannam@95 683 implementation, which idiosyncratically creates threads in detached
cannam@95 684 (non-joinable) mode by default.
cannam@95 685
cannam@95 686 \question 27sep:bigprimebug FFTW 2.1.2's complex transforms give incorrect results for large prime sizes.
cannam@95 687
cannam@95 688 This bug was fixed in FFTW 2.1.3. FFTW's complex-transform algorithm
cannam@95 689 for prime sizes (in versions 2.0 to 2.1.2) had an integer overflow
cannam@95 690 problem that caused incorrect results for many primes greater than
cannam@95 691 32768 (on 32-bit machines). (Sizes without large prime factors are
cannam@95 692 not affected.)
cannam@95 693
cannam@95 694 \question 25may:solaristhreadbug FFTW 2.1.3's multi-threaded transforms don't give any speedup on Solaris.
cannam@95 695
cannam@95 696 This bug was fixed in FFTW 2.1.4. (By default, Solaris creates
cannam@95 697 threads that do not parallelize over multiple processors, so one has
cannam@95 698 to request the proper behavior specifically.)
cannam@95 699
cannam@95 700 \question 03may:aixflags FFTW 2.1.3 crashes on AIX.
cannam@95 701
cannam@95 702 The FFTW 2.1.3 \courier{configure\} script picked incorrect compiler
cannam@95 703 flags for the \courier{xlc\} compiler on newer IBM processors. This
cannam@95 704 is fixed in FFTW 2.1.4.
cannam@95 705
cannam@95 706 \comment Here it ends!
cannam@95 707