changeset 138:56d719a5fd31 ivand_dev

Audio Inpaintin Toolbox
author Ivan Damnjanovic lnx <ivan.damnjanovic@eecs.qmul.ac.uk>
date Thu, 21 Jul 2011 14:27:47 +0100
parents 9207d56c5547
children 4bd6856a7128
files data/audio/wav/shortTest/license.txt data/audio/wav/shortTest/male01_8kHz.wav data/audio/wav/testMusic16kHz/music02_16kHz.txt data/audio/wav/testMusic16kHz/music02_16kHz.wav data/audio/wav/testMusic16kHz/music03_16kHz.txt data/audio/wav/testMusic16kHz/music03_16kHz.wav data/audio/wav/testMusic16kHz/music04_16kHz.txt data/audio/wav/testMusic16kHz/music04_16kHz.wav data/audio/wav/testMusic16kHz/music06_16kHz.txt data/audio/wav/testMusic16kHz/music06_16kHz.wav data/audio/wav/testMusic16kHz/music07_16kHz.txt data/audio/wav/testMusic16kHz/music07_16kHz.wav data/audio/wav/testMusic16kHz/music08_16kHz.txt data/audio/wav/testMusic16kHz/music08_16kHz.wav data/audio/wav/testMusic16kHz/music09_16kHz.txt data/audio/wav/testMusic16kHz/music09_16kHz.wav data/audio/wav/testMusic16kHz/music10_16kHz.txt data/audio/wav/testMusic16kHz/music10_16kHz.wav data/audio/wav/testMusic16kHz/music11_16kHz.txt data/audio/wav/testMusic16kHz/music11_16kHz.wav data/audio/wav/testMusic16kHz/music12_16kHz.txt data/audio/wav/testMusic16kHz/music12_16kHz.wav data/audio/wav/testSpeech16kHz/female01_16kHz.wav data/audio/wav/testSpeech16kHz/female02_16kHz.wav data/audio/wav/testSpeech16kHz/female03_16kHz.wav data/audio/wav/testSpeech16kHz/female04_16kHz.wav data/audio/wav/testSpeech16kHz/female05_16kHz.wav data/audio/wav/testSpeech16kHz/license.txt data/audio/wav/testSpeech16kHz/male01_16kHz.wav data/audio/wav/testSpeech16kHz/male02_16kHz.wav data/audio/wav/testSpeech16kHz/male03_16kHz.wav data/audio/wav/testSpeech16kHz/male04_16kHz.wav data/audio/wav/testSpeech16kHz/male05_16kHz.wav data/audio/wav/testSpeech8kHz_from16kHz/female01_8kHz.wav data/audio/wav/testSpeech8kHz_from16kHz/female02_8kHz.wav data/audio/wav/testSpeech8kHz_from16kHz/female03_8kHz.wav data/audio/wav/testSpeech8kHz_from16kHz/female04_8kHz.wav data/audio/wav/testSpeech8kHz_from16kHz/female05_8kHz.wav data/audio/wav/testSpeech8kHz_from16kHz/license.txt data/audio/wav/testSpeech8kHz_from16kHz/male01_8kHz.wav data/audio/wav/testSpeech8kHz_from16kHz/male02_8kHz.wav data/audio/wav/testSpeech8kHz_from16kHz/male03_8kHz.wav data/audio/wav/testSpeech8kHz_from16kHz/male04_8kHz.wav data/audio/wav/testSpeech8kHz_from16kHz/male05_8kHz.wav toolboxes/AudioInpaintingToolbox/Experiments/DeclippingExperiment/declipOneSoundExperiment.m toolboxes/AudioInpaintingToolbox/Experiments/DeclippingExperiment/declipOneSoundExperiment.m~ toolboxes/AudioInpaintingToolbox/Experiments/DeclippingExperiment/declippingExperiment.m toolboxes/AudioInpaintingToolbox/Experiments/MissingSampleTopologyExperiment/MissingSampleTopologyExperiment.m toolboxes/AudioInpaintingToolbox/Problems/generateDeclippingProblem.m toolboxes/AudioInpaintingToolbox/Problems/generateMissingGroupsProblem.m toolboxes/AudioInpaintingToolbox/Solvers/inpaintFrame_OMP.m toolboxes/AudioInpaintingToolbox/Solvers/inpaintFrame_OMP_Gabor.m toolboxes/AudioInpaintingToolbox/Solvers/inpaintFrame_consOMP.m toolboxes/AudioInpaintingToolbox/Solvers/inpaintFrame_consOMP_Gabor.m toolboxes/AudioInpaintingToolbox/Solvers/inpaintFrame_janssenInterpolation.m toolboxes/AudioInpaintingToolbox/Solvers/inpaintSignal_IndependentProcessingOfFrames.m toolboxes/AudioInpaintingToolbox/Utils/dictionaries/DCT_Dictionary.m toolboxes/AudioInpaintingToolbox/Utils/dictionaries/Gabor_Dictionary.m toolboxes/AudioInpaintingToolbox/Utils/evaluation/SNR.m toolboxes/AudioInpaintingToolbox/Utils/evaluation/SNRInpaintingPerformance.m toolboxes/AudioInpaintingToolbox/Utils/evaluation/exclude_audioQualityMeasures.m toolboxes/AudioInpaintingToolbox/Utils/evaluation/exclude_testAudioQualityMeasures.m toolboxes/AudioInpaintingToolbox/Utils/makeClippedSignal.m toolboxes/AudioInpaintingToolbox/Utils/wRect.m toolboxes/AudioInpaintingToolbox/Utils/wSine.m toolboxes/AudioInpaintingToolbox/license.txt toolboxes/AudioInpaintingToolbox/readme.txt
diffstat 67 files changed, 3325 insertions(+), 0 deletions(-) [+]
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/data/audio/wav/shortTest/license.txt	Thu Jul 21 14:27:47 2011 +0100
@@ -0,0 +1,3 @@
+License: these files are made available under the terms of the Creative Commons Attribution-NonCommercial-ShareAlike 2.0 license (http://creativecommons.org/licenses/by-nc-sa/2.0/).
+Authors: Hiroshi Sawada, Shoko Araki and Emmanuel Vincent.
+Downloaded from: http://sisec2008.wiki.irisa.fr/.
Binary file data/audio/wav/shortTest/male01_8kHz.wav has changed
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/data/audio/wav/testMusic16kHz/music02_16kHz.txt	Thu Jul 21 14:27:47 2011 +0100
@@ -0,0 +1,5 @@
+Original name: 71296__Bopping__Acoustic_bass_test_2.wav
+Author: Bopping
+License: Creative Commons Sampling Plus 1.0 License (http://creativecommons.org/licenses/sampling+/1.0/)
+Downloaded from: http://www.freesound.org/samplesViewSingle.php?id=71296
+ 
Binary file data/audio/wav/testMusic16kHz/music02_16kHz.wav has changed
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/data/audio/wav/testMusic16kHz/music03_16kHz.txt	Thu Jul 21 14:27:47 2011 +0100
@@ -0,0 +1,10 @@
+LICENSE
+
+2007 - Licensed under Creative Commons Attribution Noncommercial (3.0)
+Please read: http://creativecommons.org/licenses/by-nc/3.0/
+
+
+CREDITS
+
+"Que Pena / Tanto Faz" by Tamy, Curvemusic
+Downloaded and modified from: http://ccmixter.org/curve/view/contest/sources
Binary file data/audio/wav/testMusic16kHz/music03_16kHz.wav has changed
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/data/audio/wav/testMusic16kHz/music04_16kHz.txt	Thu Jul 21 14:27:47 2011 +0100
@@ -0,0 +1,10 @@
+LICENSE
+
+2007 - Licensed under Creative Commons Attribution Noncommercial (3.0)
+Please read: http://creativecommons.org/licenses/by-nc/3.0/
+
+
+CREDITS
+
+"Que Pena / Tanto Faz" by Tamy, Curvemusic
+Downloaded and modified from: http://ccmixter.org/curve/view/contest/sources
Binary file data/audio/wav/testMusic16kHz/music04_16kHz.wav has changed
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/data/audio/wav/testMusic16kHz/music06_16kHz.txt	Thu Jul 21 14:27:47 2011 +0100
@@ -0,0 +1,21 @@
+LICENSE
+
+License: Creative Commons Attribution-Noncommercial-ShareAlike 3.0
+Please read: http://creativecommons.org/licenses/by-nc/3.0/
+
+
+CREDITS
+
+The Ultimate NZ Tour
+URL: http://newzealandeducated.com/contest/ultimate-nz-tour-i/
+
+Remix is done by Michel Desnoues from Telecom ParisTech
+
+
+DESCRIPTION
+
+This snip is extracted from the corresponding full-length mix available in dev2_full_mix.zip
+
+Snip beginning : 43 seconds (1896300 samples)
+Snip end       : 61 seconds (2690100 samples)
+Snip length    : 18 seconds (793801  samples)
Binary file data/audio/wav/testMusic16kHz/music06_16kHz.wav has changed
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/data/audio/wav/testMusic16kHz/music07_16kHz.txt	Thu Jul 21 14:27:47 2011 +0100
@@ -0,0 +1,3 @@
+License: these files are made available under the terms of the Creative Commons Attribution-NonCommercial-ShareAlike 2.0 license (http://creativecommons.org/licenses/by-nc-sa/2.0/).
+Authors: Another Dreamer and Alex Q.
+Downloaded from: http://sisec2008.wiki.irisa.fr/.
Binary file data/audio/wav/testMusic16kHz/music07_16kHz.wav has changed
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/data/audio/wav/testMusic16kHz/music08_16kHz.txt	Thu Jul 21 14:27:47 2011 +0100
@@ -0,0 +1,38 @@
+LICENSE
+
+All files in this archive are copyrighted material from Bearlin (Ignasi Calvo and Jordi Rabascall). However, the use of these audio files for scientific research purposes is granted if credit is given to them as follows:
+<<
+Artist: Bearlin (Ignasi Calvo & Jordi Rabascall)
+Song: Roads
+Producer: Sergi Vila & Bearlin
+Website: www.bearlin.net
+>> 
+
+Using these audio files for any purposes that are not scientific research is explicitly prohibited.
+
+
+CREDITS
+
+Music & lyrics
+Ignasi Calvo
+
+Production
+Sergi Vila & BEARLIN (Ignasi Calvo & Jordi Rabascall)
+
+Mixing
+Sergi Vila at Garatge Produccions
+
+Personnel
+Vocals: Jordi Rabascall
+Acoustic piano, synthesizers and programming: Ignasi Calvo
+Guitars: Xavier Fern‡ndez de Mera
+Acoustic drums: Carles Domingo Triquell
+Acoustic bass: Pepe Curioni
+
+Recording
+Acoustic piano and acoustic guitar: 44.1 Recording Studio (Girona), by Toni Paris.
+Acoustic drums, percussion and acoustic bass: Palatzi estudis (Barcelona), by David Palatzi.
+Synthesizers, guitars, programming and effects: BadQstudios and Garatge Produccions (Barcelona).
+
+Mastering
+Music Lan Recording Studios (Girona), by Jordi SolŽ.
Binary file data/audio/wav/testMusic16kHz/music08_16kHz.wav has changed
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/data/audio/wav/testMusic16kHz/music09_16kHz.txt	Thu Jul 21 14:27:47 2011 +0100
@@ -0,0 +1,12 @@
+LICENSE
+
+License: Creative Commons Attribution-NonCommercial 2.5
+Please read: http://creativecommons.org/licenses/by-nc/2.5/
+
+
+CREDITS
+
+"Remember the name" by Fort Minor, Warner Bros. Records and Machine Shop Recordings
+URL: http://www.myspace.com/fortminor
+
+Remix is done by Michel Desnoues from Telecom ParisTech
Binary file data/audio/wav/testMusic16kHz/music09_16kHz.wav has changed
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/data/audio/wav/testMusic16kHz/music10_16kHz.txt	Thu Jul 21 14:27:47 2011 +0100
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+License and authors: these files are licensed for research use only by their authors (see list of authors below). The authors of the dataset are Mads Dyrholm and Lucas Parra. The music used for recordings was taken from "Germ Germ" by Das Böse Ding and has kindly been approved for public presentation by Jan Klare of Das Böse Ding in the name of research. 
+Download from: http://sisec2008.wiki.irisa.fr/
\ No newline at end of file
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+++ b/data/audio/wav/testMusic16kHz/music11_16kHz.txt	Thu Jul 21 14:27:47 2011 +0100
@@ -0,0 +1,3 @@
+License: These files are made available under the terms of the Creative Commons Attribution-NonCommercial-ShareAlike 2.0 license (http://creativecommons.org/licenses/by-nc-sa/2.0/).
+Authors: Shannon Hurley, Nine Inch Nails, AlexQ (Alexander Lozupone), Mokamed, Carl Leth and Jim's Big Ego for music source signals and Hiroshi Sawada for mixture signals.
+Downloaded from: http://sisec.wiki.irisa.fr/
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/data/audio/wav/testMusic16kHz/music12_16kHz.txt	Thu Jul 21 14:27:47 2011 +0100
@@ -0,0 +1,3 @@
+License: These files are made available under the terms of the Creative Commons Attribution-NonCommercial-ShareAlike 2.0 license (http://creativecommons.org/licenses/by-nc-sa/2.0/).
+Authors: Shannon Hurley, Nine Inch Nails, AlexQ (Alexander Lozupone), Mokamed, Carl Leth and Jim's Big Ego for music source signals and Hiroshi Sawada for mixture signals.
+Downloaded from: http://sisec.wiki.irisa.fr/
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Binary file data/audio/wav/testSpeech16kHz/female01_16kHz.wav has changed
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/data/audio/wav/testSpeech16kHz/license.txt	Thu Jul 21 14:27:47 2011 +0100
@@ -0,0 +1,3 @@
+License: these files are made available under the terms of the Creative Commons Attribution-NonCommercial-ShareAlike 2.0 license (http://creativecommons.org/licenses/by-nc-sa/2.0/).
+Authors: Hiroshi Sawada, Shoko Araki and Emmanuel Vincent.
+Downloaded from: http://sisec2008.wiki.irisa.fr/.
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/data/audio/wav/testSpeech8kHz_from16kHz/license.txt	Thu Jul 21 14:27:47 2011 +0100
@@ -0,0 +1,3 @@
+License: these files are made available under the terms of the Creative Commons Attribution-NonCommercial-ShareAlike 2.0 license (http://creativecommons.org/licenses/by-nc-sa/2.0/).
+Authors: Hiroshi Sawada, Shoko Araki and Emmanuel Vincent.
+Downloaded from: http://sisec2008.wiki.irisa.fr/.
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Binary file data/audio/wav/testSpeech8kHz_from16kHz/male02_8kHz.wav has changed
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Binary file data/audio/wav/testSpeech8kHz_from16kHz/male05_8kHz.wav has changed
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/toolboxes/AudioInpaintingToolbox/Experiments/DeclippingExperiment/declipOneSoundExperiment.m	Thu Jul 21 14:27:47 2011 +0100
@@ -0,0 +1,123 @@
+function declipOneSoundExperiment(expParam)
+% A simple experiment to declip a signal.
+%
+% Usage: declipOneSoundExperiment(expParam)
+%
+%
+% Inputs:
+%          - expParam is an optional structure where the user can define
+%          the experiment parameters.
+%          - expParam.clippingLevel: clipping level between 0 and 1.
+%          - expParam.filename: file to be tested.
+%          - expParam.destDir: path to store the results.
+%          - expParam.solver: solver with its parameters
+%          - expParam.destDir: path to store the results.
+%
+%
+% -------------------
+%
+% Audio Inpainting toolbox
+% Date: June 28, 2011
+% By Valentin Emiya, Amir Adler, Maria Jafari
+% This code is distributed under the terms of the GNU Public License version 3 (http://www.gnu.org/licenses/gpl.txt).
+
+if ~isdeployed
+    close all
+    addpath('../../Problems/');
+    addpath('../../Solvers/');
+    addpath('../../Utils/');
+    addpath('../../Utils/dictionaries/');
+    addpath('../../Utils/evaluation/');
+%     addpath('../../Utils/TCPIP_SocketCom/');
+%     javaaddpath('../../Utils/TCPIP_SocketCom');
+    dbstop if error
+end
+
+%% Set parameters
+if nargin<1
+    expParam = [];
+end
+if ~isfield(expParam,'filename')
+    expParam.filename = 'male01_8kHz.wav';
+end
+if ~isfield(expParam,'clippingLevel')
+    expParam.clippingLevel = 0.6;
+end
+
+% Solver
+if ~isfield(expParam,'solver')
+    warning('AITB:N','Frame length=256 is used to have faster computations. Recommended frame length is 512 at 8kHz.');
+    warning('AITB:overlap','Overlap factor=2 is used to have faster computations. Recommended value: 4.');
+    
+    expParam.solver.name = 'OMP-G';
+    expParam.solver.function = @inpaintSignal_IndependentProcessingOfFrames;
+    expParam.solver.param.N = 512; % frame length
+    expParam.solver.param.N = 256; % frame length
+    expParam.solver.param.inpaintFrame = @inpaintFrame_OMP_Gabor; % solver function
+    expParam.solver.param.OMPerr = 0.001;
+    expParam.solver.param.sparsityDegree = expParam.solver.param.N/4;
+    expParam.solver.param.D_fun = @Gabor_Dictionary; % Dictionary (function handle)
+    expParam.solver.param.OLA_frameOverlapFactor = 4;
+    expParam.solver.param.OLA_frameOverlapFactor = 2;
+    expParam.solver.param.redundancyFactor = 2; % Dictionary redundancy
+    expParam.solver.param.wd = @wRect; % Weighting window for dictionary atoms
+    expParam.solver.param.wa = @wRect; % Analysis window
+    expParam.solver.param.OLA_ws = @wSine; % Synthesis window
+    expParam.solver.param.SKIP_CLEAN_FRAMES = true; % do not process frames where there is no missing samples
+    expParam.solver.param.MULTITHREAD_FRAME_PROCESSING = false; % not implemented yet
+end
+if ~isfield(expParam,'destDir'),
+    expParam.destDir = '../../tmp/declipOneSound/';
+end
+if ~exist(expParam.destDir,'dir')
+    mkdir(expParam.destDir)
+end
+
+%% Read test signal
+[x fs] = wavread(expParam.filename);
+
+%% Generate the problem
+[problemData, solutionData] = generateDeclippingProblem(x,expParam.clippingLevel);
+
+%% Declip with solver
+fprintf('\nDeclipping\n')
+% [xEst1 xEst2] = inpaintSignal_IndependentProcessingOfFrames(problemData,param);
+solverParam = expParam.solver.param;
+[xEst1 xEst2] = expParam.solver.function(problemData,solverParam);
+
+%% Compute and display SNR performance
+L = length(xEst1);
+N = expParam.solver.param.N;
+[SNRAll, SNRmiss] = SNRInpaintingPerformance(...
+    solutionData.xClean(N:L-N),problemData.x(N:L-N),...
+    xEst2(N:L-N),problemData.IMiss(N:L-N));
+fprintf('SNR on missing samples:\n');
+fprintf('Clipped: %g dB\n',SNRmiss(1));
+fprintf('Estimate: %g dB\n',SNRmiss(2));
+
+
+% Plot results
+xClipped = problemData.x;
+xClean = solutionData.xClean;
+figure
+hold on
+plot(xClipped,'r')
+plot(xClean)
+plot(xEst2,'--g')
+plot([1;length(xClipped)],[1;1]*[-1,1]*max(abs(xClipped)),':r')
+legend('Clipped','True solution','Estimate')
+
+% Normalized and save sounds
+normX = 1.1*max(abs([xEst1(:);xEst2(:);xClean(:)]));
+L = min([length(xEst2),length(xEst1),length(xClean),length(xEst1),length(xClipped)]);
+xEst1 = xEst1(1:L)/normX;
+xEst2 = xEst2(1:L)/normX;
+xClipped = xClipped(1:L)/normX;
+xClean = xClean(1:L)/normX;
+wavwrite(xEst1,fs,[expParam.destDir 'xEst1.wav']);
+wavwrite(xEst2,fs,[expParam.destDir 'xEst2.wav']);
+wavwrite(xClipped,fs,[expParam.destDir 'xClipped.wav']);
+wavwrite(xClean,fs,[expParam.destDir 'xClean.wav']);
+
+
+return
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/toolboxes/AudioInpaintingToolbox/Experiments/DeclippingExperiment/declipOneSoundExperiment.m~	Thu Jul 21 14:27:47 2011 +0100
@@ -0,0 +1,123 @@
+function declipOneSoundExperiment(expParam)
+% A simple experiment to declip a signal.
+%
+% Usage: declipOneSoundExperiment(expParam)
+%
+%
+% Inputs:
+%          - expParam is an optional structure where the user can define
+%          the experiment parameters.
+%          - expParam.clippingLevel: clipping level between 0 and 1.
+%          - expParam.filename: file to be tested.
+%          - expParam.destDir: path to store the results.
+%          - expParam.solver: solver with its parameters
+%          - expParam.destDir: path to store the results.
+%
+%
+% -------------------
+%
+% Audio Inpainting toolbox
+% Date: June 28, 2011
+% By Valentin Emiya, Amir Adler, Maria Jafari
+% This code is distributed under the terms of the GNU Public License version 3 (http://www.gnu.org/licenses/gpl.txt).
+
+if ~isdeployed
+    close all
+    addpath('../../Problems/');
+    addpath('../../Solvers/');
+    addpath('../../Utils/');
+    addpath('../../Utils/dictionaries/');
+    addpath('../../Utils/evaluation/');
+%     addpath('../../Utils/TCPIP_SocketCom/');
+%     javaaddpath('../../Utils/TCPIP_SocketCom');
+    dbstop if error
+end
+
+%% Set parameters
+if nargin<1
+    expParam = [];
+end
+if ~isfield(expParam,'filename')
+    expParam.filename = 'male01_8kHz.wav';
+end
+if ~isfield(expParam,'clippingLevel')
+    expParam.clippingLevel = 0.6;
+end
+
+% Solver
+if ~isfield(expParam,'solver')
+    warning('AITB:N','Frame length=256 is used to have faster computations. Recommended frame length is 512 at 8kHz.');
+    warning('AITB:overlap','Overlap factor=2 is used to have faster computations. Recommended value: 4.');
+    
+    expParam.solver.name = 'OMP-G';
+    expParam.solver.function = @inpaintSignal_IndependentProcessingOfFrames;
+    expParam.solver.param.N = 512; % frame length
+    expParam.solver.param.N = 256; % frame length
+    expParam.solver.param.inpaintFrame = @inpaintFrame_OMP_Gabor; % solver function
+    expParam.solver.param.OMPerr = 0.001;
+    expParam.solver.param.sparsityDegree = expParam.solver.param.N/4;
+    expParam.solver.param.D_fun = @Gabor_Dictionary; % Dictionary (function handle)
+    expParam.solver.param.OLA_frameOverlapFactor = 4;
+    expParam.solver.param.OLA_frameOverlapFactor = 2;
+    expParam.solver.param.redundancyFactor = 2; % Dictionary redundancy
+    expParam.solver.param.wd = @wRect; % Weighting window for dictionary atoms
+    expParam.solver.param.wa = @wRect; % Analysis window
+    expParam.solver.param.OLA_ws = @wSine; % Synthesis window
+    expParam.solver.param.SKIP_CLEAN_FRAMES = true; % do not process frames where there is no missing samples
+    expParam.solver.param.MULTITHREAD_FRAME_PROCESSING = false; % not implemented yet
+end
+if ~isfield(expParam,'destDir'),
+    expParam.destDir = '../../tmp/declipOneSound/';
+end
+if ~exist(expParam.destDir,'dir')
+    mkdir(expParam.destDir)
+end
+
+%% Read test signal
+[x fs] = wavread(expParam.filename);
+
+%% Generate the problem
+[problemData, solutionData] = generateDeclippingProblem(x,expParam.clippingLevel);
+
+%% Declip with solver
+fprintf('\nDeclipping\n')
+% [xEst1 xEst2] = inpaintSignal_IndependentProcessingOfFrames(problemData,param);
+solverParam = expParam.solver.param;
+[xEst1 xEst2] = expParam.solver.function(problemData,solverParam);
+
+%% Compute and display SNR performance
+L = length(xEst1);
+N = expParam.solver.param.N;
+[SNRAll, SNRmiss] = SNRInpaintingPerformance(...
+    solutionData.xClean(N:L-N),problemData.x(N:L-N),...
+    xEst2(N:L-N),problemData.IMiss(N:L-N));
+fprintf('SNR on missing samples:\n');
+fprintf('Clipped: %g dB\n',SNRmiss(1));
+fprintf('Estimate: %g dB\n',SNRmiss(2));
+
+
+% Plot results
+xClipped = problemData.x;
+xClean = solutionData.xClean;
+figure
+hold on
+plot(xClipped,'r')
+plot(xClean)
+plot(xEst2,'--g')
+plot([1;length(xClipped)],[1;1]*[-1,1]*max(abs(xClipped)),':r')
+legend('Clipped','True solution','Estimate')
+
+% Normalized and save sounds
+normX = 1.1*max(abs([xEst1(:);xEst2(:);xClean(:)]));
+L = min([length(xEst2),length(xEst1),length(xClean),length(xEst1),length(xClipped)]);
+xEst1 = xEst1(1:L)/normX;
+xEst2 = xEst2(1:L)/normX;
+xClipped = xClipped(1:L)/normX;
+xClean = xClean(1:L)/normX;
+wavwrite(xEst1,fs,[expParam.destDir 'xEst1.wav']);
+wavwrite(xEst2,fs,[expParam.destDir 'xEst2.wav']);
+wavwrite(xClipped,fs,[expParam.destDir 'xClipped.wav']);
+wavwrite(xClean,fs,[expParam.destDir 'xClean.wav']);
+
+
+return
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/toolboxes/AudioInpaintingToolbox/Experiments/DeclippingExperiment/declippingExperiment.m	Thu Jul 21 14:27:47 2011 +0100
@@ -0,0 +1,211 @@
+function declippingExperiment(expParam)
+% Declip several sounds with different clipping levels, using several
+% solvers.
+%
+% Usage: declippingExperiment(expParam)
+%
+%
+% Inputs:
+%          - expParam is an optional structure where the user can define
+%          the experiment parameters.
+%          - expParam.clippingScale: clipping values to test, as a vector
+%           of real numbers in ]0,1[.
+%          - expParam.soundDir: path to sound directory. All the .wav files
+%          in this directory will be tested.
+%          - expParam.destDir: path to store the results.
+%          - expParam.solvers: list of solvers with their parameters
+%
+%
+% -------------------
+%
+% Audio Inpainting toolbox
+% Date: June 28, 2011
+% By Valentin Emiya, Amir Adler, Maria Jafari
+% This code is distributed under the terms of the GNU Public License version 3 (http://www.gnu.org/licenses/gpl.txt).
+
+if ~isdeployed
+    addpath('../../Problems/');
+    addpath('../../Solvers/');
+    addpath('../../Utils/');
+    addpath('../../Utils/dictionaries/');
+    addpath('../../Utils/evaluation/');
+%     addpath('../../Utils/TCPIP_SocketCom/');
+%     javaaddpath('../../Utils/TCPIP_SocketCom');
+    dbstop if error
+    close all
+end
+
+if nargin<1
+    expParam = [];
+end
+if ~isfield(expParam,'clippingScale'),
+    expParam.clippingScale = 0.4:0.2:0.8;
+end
+if ~isfield(expParam,'soundDir'),
+    expParam.soundDir = '../../Data/testSpeech8kHz_from16kHz/';
+    expParam.soundDir = '../../Data/shortTest/';
+    warning('AITB:soundDir','soundDir has only one sound to have faster computations. Recommended soundDir: ../../Data/testSpeech8kHz_from16kHz/');
+end
+if ~isfield(expParam,'destDir'),
+    expParam.destDir = '../../tmp/declip/';
+end
+
+%% Set parameters
+
+if ~isfield(expParam,'solvers'),
+    % Choose the solver methods you would like to test: OMP, L1, Janssen
+    warning('AITB:N','Frame length=256 is used to have faster computations. Recommended frame length is 512 at 8kHz.');
+    warning('AITB:overlap','Overlap factor=2 is used to have faster computations. Recommended value: 4.');
+    nSolver = 0;
+    
+    nSolver = nSolver+1;
+    expParam.solvers(nSolver).name = 'OMP-C';
+    expParam.solvers(nSolver).function = @inpaintSignal_IndependentProcessingOfFrames;
+    expParam.solvers(nSolver).param.N = 512; % frame length
+    expParam.solvers(nSolver).param.N = 256; % frame length
+    expParam.solvers(nSolver).param.inpaintFrame = @inpaintFrame_OMP; % solver function
+    expParam.solvers(nSolver).param.OMPerr = 0.001;
+    expParam.solvers(nSolver).param.sparsityDegree = expParam.solvers(nSolver).param.N/4;
+    expParam.solvers(nSolver).param.D_fun = @DCT_Dictionary; % Dictionary (function handle)
+    expParam.solvers(nSolver).param.OLA_frameOverlapFactor = 4;
+    expParam.solvers(nSolver).param.OLA_frameOverlapFactor = 2;
+    expParam.solvers(nSolver).param.redundancyFactor = 2; % Dictionary redundancy
+    expParam.solvers(nSolver).param.wd = @wRect; % Weighting window for dictionary atoms
+    expParam.solvers(nSolver).param.wa = @wRect; % Analysis window
+    expParam.solvers(nSolver).param.OLA_ws = @wSine; % Synthesis window
+    expParam.solvers(nSolver).param.SKIP_CLEAN_FRAMES = true; % do not process frames where there is no missing samples
+    expParam.solvers(nSolver).param.MULTITHREAD_FRAME_PROCESSING = false; % not implemented yet
+    
+    nSolver = nSolver+1;
+    expParam.solvers(nSolver).name = 'consOMP-C';
+    expParam.solvers(nSolver).function = @inpaintSignal_IndependentProcessingOfFrames;
+    expParam.solvers(nSolver).param.N = 512; % frame length
+    expParam.solvers(nSolver).param.N = 256; % frame length
+    expParam.solvers(nSolver).param.inpaintFrame = @inpaintFrame_consOMP; % solver function
+    expParam.solvers(nSolver).param.OMPerr = 0.001;
+    expParam.solvers(nSolver).param.sparsityDegree = expParam.solvers(nSolver).param.N/4;
+    expParam.solvers(nSolver).param.D_fun = @DCT_Dictionary; % Dictionary (function handle)
+    expParam.solvers(nSolver).param.OLA_frameOverlapFactor = 4;
+    expParam.solvers(nSolver).param.OLA_frameOverlapFactor = 2;
+    expParam.solvers(nSolver).param.redundancyFactor = 2; % Dictionary redundancy
+    expParam.solvers(nSolver).param.wd = @wRect; % Weighting window for dictionary atoms
+    expParam.solvers(nSolver).param.wa = @wRect; % Analysis window
+    expParam.solvers(nSolver).param.OLA_ws = @wSine; % Synthesis window
+    expParam.solvers(nSolver).param.SKIP_CLEAN_FRAMES = true; % do not process frames where there is no missing samples
+    expParam.solvers(nSolver).param.MULTITHREAD_FRAME_PROCESSING = false; % not implemented yet
+    
+    nSolver = nSolver+1;
+    expParam.solvers(nSolver).name = 'OMP-G';
+    expParam.solvers(nSolver).function = @inpaintSignal_IndependentProcessingOfFrames;
+    expParam.solvers(nSolver).param.N = 512; % frame length
+    expParam.solvers(nSolver).param.N = 256; % frame length
+    expParam.solvers(nSolver).param.inpaintFrame = @inpaintFrame_OMP_Gabor; % solver function
+    expParam.solvers(nSolver).param.OMPerr = 0.001;
+    expParam.solvers(nSolver).param.sparsityDegree = expParam.solvers(nSolver).param.N/4;
+    expParam.solvers(nSolver).param.D_fun = @Gabor_Dictionary; % Dictionary (function handle)
+    expParam.solvers(nSolver).param.OLA_frameOverlapFactor = 4;
+    expParam.solvers(nSolver).param.OLA_frameOverlapFactor = 2;
+    expParam.solvers(nSolver).param.redundancyFactor = 2; % Dictionary redundancy
+    expParam.solvers(nSolver).param.wd = @wRect; % Weighting window for dictionary atoms
+    expParam.solvers(nSolver).param.wa = @wRect; % Analysis window
+    expParam.solvers(nSolver).param.OLA_ws = @wSine; % Synthesis window
+    expParam.solvers(nSolver).param.SKIP_CLEAN_FRAMES = true; % do not process frames where there is no missing samples
+    expParam.solvers(nSolver).param.MULTITHREAD_FRAME_PROCESSING = false; % not implemented yet
+    
+    nSolver = nSolver+1;
+    expParam.solvers(nSolver).name = 'consOMP-G';
+    expParam.solvers(nSolver).function = @inpaintSignal_IndependentProcessingOfFrames;
+    expParam.solvers(nSolver).param.N = 512; % frame length
+    expParam.solvers(nSolver).param.N = 256; % frame length
+    expParam.solvers(nSolver).param.inpaintFrame = @inpaintFrame_consOMP_Gabor; % solver function
+    expParam.solvers(nSolver).param.OMPerr = 0.001;
+    expParam.solvers(nSolver).param.sparsityDegree = expParam.solvers(nSolver).param.N/4;
+    expParam.solvers(nSolver).param.D_fun = @Gabor_Dictionary; % Dictionary (function handle)
+    expParam.solvers(nSolver).param.OLA_frameOverlapFactor = 4;
+    expParam.solvers(nSolver).param.OLA_frameOverlapFactor = 2
+    expParam.solvers(nSolver).param.redundancyFactor = 2; % Dictionary redundancy
+    expParam.solvers(nSolver).param.wd = @wRect; % Weighting window for dictionary atoms
+    expParam.solvers(nSolver).param.wa = @wRect; % Analysis window
+    expParam.solvers(nSolver).param.OLA_ws = @wSine; % Synthesis window
+    expParam.solvers(nSolver).param.SKIP_CLEAN_FRAMES = true; % do not process frames where there is no missing samples
+    expParam.solvers(nSolver).param.MULTITHREAD_FRAME_PROCESSING = false; % not implemented yet
+    
+    nSolver = nSolver+1;
+    expParam.solvers(nSolver).name = 'Janssen';
+    expParam.solvers(nSolver).function = @inpaintSignal_IndependentProcessingOfFrames;
+    expParam.solvers(nSolver).param.inpaintFrame = @inpaintFrame_janssenInterpolation; % solver function
+    expParam.solvers(nSolver).param.N = 512; % frame length
+    expParam.solvers(nSolver).param.N = 256;
+    expParam.solvers(nSolver).param.OLA_frameOverlapFactor = 4;
+    expParam.solvers(nSolver).param.OLA_frameOverlapFactor = 2
+    expParam.solvers(nSolver).param.wa = @wRect; % Analysis window
+    expParam.solvers(nSolver).param.OLA_ws = @wSine; % Synthesis window
+    expParam.solvers(nSolver).param.SKIP_CLEAN_FRAMES = true; % do not process frames where there is no missing samples
+    expParam.solvers(nSolver).param.MULTITHREAD_FRAME_PROCESSING = false; % not implemented yet
+end
+
+SNRClip = zeros(0,0,0);
+fprintf('Folder %s\n',expParam.soundDir);
+if ~exist(expParam.destDir,'dir')
+    mkdir(expParam.destDir)
+end
+soundFiles = dir([expParam.soundDir '*.wav']);
+
+for kf = 1:length(soundFiles)
+    soundfile = [expParam.soundDir soundFiles(kf).name];
+    fprintf(' File %s\n',soundfile);
+    %% Read test signal
+    [x fs] = wavread(soundfile);
+    
+    for kClip = 1:length(expParam.clippingScale)
+        clippingLevel = expParam.clippingScale(kClip);
+        fprintf('  Clip level %g\n',clippingLevel);
+        
+        %% Generate the problem
+        [problemData, solutionData] = generateDeclippingProblem(x,clippingLevel);
+        
+        for nSolver = 1:length(expParam.solvers)
+            %% Declip with solver
+            solverParam = expParam.solvers(nSolver).param;
+            [xEst1 xEst2] = expParam.solvers(nSolver).function(problemData,solverParam);
+            
+            %% compute performance
+            L = length(xEst1);
+            N = solverParam.N;
+            [SNRAll, SNRmiss] = ...
+                SNRInpaintingPerformance(...
+                solutionData.xClean(N:L-N),...
+                problemData.x(N:L-N),...
+                xEst2(N:L-N),...
+                problemData.IMiss(N:L-N));
+            SNRClip(kf,kClip,nSolver) = SNRmiss(2);
+            
+            % normalize and save both the reference and the estimates!
+            normX = 1.1*max(abs([xEst1(:);xEst2(:);solutionData.xClean(:)]));
+            
+            L = min([length(xEst2),length(xEst1),length(solutionData.xClean),length(problemData.x)]);
+            xEst1 = xEst1(1:L)/normX;
+            xEst2 = xEst2(1:L)/normX;
+            xClipped = problemData.x(1:L)/normX;
+            xClean = solutionData.xClean(1:L)/normX;
+            wavwrite(xEst1,fs,sprintf('%s%s%s%g.wav',expParam.destDir,soundFiles(kf).name(1:end-4),'Est1',clippingLevel));
+            wavwrite(xEst2,fs,sprintf('%s%s%s%g.wav',expParam.destDir,soundFiles(kf).name(1:end-4),'Est2',clippingLevel));
+            wavwrite(xClipped,fs,sprintf('%s%s%s%g.wav',expParam.destDir,soundFiles(kf).name(1:end-4),'Clipped',clippingLevel));
+            wavwrite(xClean,fs,sprintf('%s%s%s%g.wav',expParam.destDir,soundFiles(kf).name(1:end-4),'Ref',clippingLevel));
+            
+            fprintf('\n');
+            clear a xEst1 xEst2 xClipped xClean IClipped
+            save([expParam.destDir 'clippingExp.mat']);
+        end
+    end
+end
+
+%% Plot results
+averageSNR = squeeze(mean(SNRClip,1));
+disp(averageSNR)
+figure,
+plot(averageSNR)
+legend(arrayfun(@(x)x.name,expParam.solvers,'UniformOutput',false));
+xlabel('Clipping level')
+ylabel('SNR')
+return
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/toolboxes/AudioInpaintingToolbox/Experiments/MissingSampleTopologyExperiment/MissingSampleTopologyExperiment.m	Thu Jul 21 14:27:47 2011 +0100
@@ -0,0 +1,223 @@
+function MissingSampleTopologyExperiment(expParam)
+% For a total number of missing samples C in a frame, create several
+% configuration of B holes with length A, where A*B=C (i.e. the total 
+% number of missing samples is constant). Test several values of C, several
+% solvers. For each C, test all possible combination of (A,B) such that
+% A*B=C.
+% Note that for each combination (A,B), a number of frames are tested at
+% random and SNR results are then averaged.
+%
+% Usage: MissingSampleTopologyExperiment(expParam)
+%
+%
+% Inputs:
+%          - expParam is an optional structure where the user can define
+%          the experiment parameters.
+%          - expParam.soundDir: path to sound directory. All the .wav files
+%          in this directory will be tested at random.
+%          - expParam.destDir: path to store the results.
+%          - expParam.N: frame length
+%          - expParam.NFramesPerHoleSize: number of frames to use for each
+%          testing configuration (A,B). Results are then averaged.
+%          - expParam.totalMissSamplesList: list of all tested values C for
+%          the total number of missing samples in a frame
+%          - expParam.solvers: list of solvers with their parameters
+%
+% -------------------
+%
+% Audio Inpainting toolbox
+% Date: June 28, 2011
+% By Valentin Emiya, Amir Adler, Maria Jafari
+% This code is distributed under the terms of the GNU Public License version 3 (http://www.gnu.org/licenses/gpl.txt).
+
+if ~isdeployed
+    addpath('../../Problems/');
+    addpath('../../Solvers/');
+    addpath('../../Utils/');
+    addpath('../../Utils/dictionaries/');
+    addpath('../../Utils/evaluation/');
+%     addpath('../../Utils/TCPIP_SocketCom/');
+%     javaaddpath('../../Utils/TCPIP_SocketCom');
+    dbstop if error
+    close all
+end
+
+%% Set parameters
+if nargin<1
+    expParam = [];
+end
+% Path to audio files
+if ~isfield(expParam,'soundDir'),
+    expParam.soundDir = '../../Data/testSpeech8kHz_from16kHz/';
+end
+if ~isfield(expParam,'destDir'),
+    expParam.destDir = '../../tmp/missSampTopoExp/';
+end
+if ~exist(expParam.destDir,'dir')
+    mkdir(expParam.destDir)
+end
+
+
+% frame length
+if ~isfield(expParam,'N'),
+    expParam.N = 512;
+    expParam.N = 256;
+    warning('AITB:N','Frame length=256 is used to have faster computations. Recommended frame length is 512 at 8kHz.');
+end
+
+% Number of random frames to test
+if ~isfield(expParam,'NFramesPerHoleSize'),
+    expParam.NFramesPerHoleSize = 20;
+    warning('AITB:NFrames','expParam.NFramesPerHoleSize = 20 is used to have faster computations. Recommended value: several hundreds.');
+end
+
+% Number of missing samples: which numbers to test?
+if ~isfield(expParam,'totalMissSamplesList')
+    expParam.totalMissSamplesList = [12,36,60,120,180,240];
+    expParam.totalMissSamplesList = [12,36];
+    warning('AITB:Miss','expParam.totalMissSamplesList = [12,36] is used to have faster computations. Recommended list: expParam.totalMissSamplesList = [12,36,60,120,180,240].');
+end
+
+% Choose the solver methods you would like to test: OMP, L1, Janssen
+if ~isfield(expParam,'solvers'),
+    nSolver = 0;
+    nSolver = nSolver+1;
+    expParam.solvers(nSolver).name = 'OMP-G';
+    expParam.solvers(nSolver).inpaintFrame = @inpaintFrame_OMP_Gabor; % solver function
+    expParam.solvers(nSolver).param.N = expParam.N; % frame length
+    expParam.solvers(nSolver).param.OMPerr = 0.001;
+    expParam.solvers(nSolver).param.sparsityDegree = expParam.solvers(nSolver).param.N/4;
+    expParam.solvers(nSolver).param.D_fun = @Gabor_Dictionary; % Dictionary (function handle)
+    expParam.solvers(nSolver).param.redundancyFactor = 2; % Dictionary redundancy
+    expParam.solvers(nSolver).param.wa = @wRect; % Analysis window
+    
+    nSolver = nSolver+1;
+    expParam.solvers(nSolver).name = 'Janssen';
+    expParam.solvers(nSolver).inpaintFrame = @inpaintFrame_janssenInterpolation; % solver function
+    expParam.solvers(nSolver).param.N = expParam.N; % frame length
+end
+
+
+
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+soundDir = expParam.soundDir;
+wavFiles = dir([soundDir '*.wav']);
+wavFiles = arrayfun(@(x)[soundDir x.name],wavFiles,'UniformOutput',false);
+
+%% Draw a list of random frames
+% Choose an audio file at random
+frameParam.kFrameFile = randi(length(wavFiles),expParam.NFramesPerHoleSize);
+
+% For each audio file, find maximum mean energy among all frames
+[dum fs] = wavread([soundDir wavFiles{1}],'size');
+Ne = round(512/16000*fs);
+E2m = zeros(length(wavFiles),1);
+for kf = 1:length(wavFiles)
+    x=wavread(wavFiles{kf});
+    xm = filter(ones(Ne,1)/Ne,1,abs(x.^2));
+    E2m(kf) = 10*log10(max(xm));
+end
+
+% Choose the location of a frame at random, with a minimum energy
+maxDiffE2m = 10;
+frameParam.kFrameBegin = NaN(expParam.NFramesPerHoleSize,1);
+for kf = 1:expParam.NFramesPerHoleSize
+    siz = wavread(wavFiles{frameParam.kFrameFile(kf)},'size');
+    while true
+        frameParam.kFrameBegin(kf) = randi(siz(1)-expParam.N+1);
+        x = wavread(wavFiles{frameParam.kFrameFile(kf)},[0,expParam.N-1]+frameParam.kFrameBegin(kf));
+        E2m0 = 10*log10(mean(abs(x.^2)));
+        if E2m(frameParam.kFrameFile(kf))-E2m0 <= maxDiffE2m
+            break
+        end
+    end
+end
+
+%% Test each number of missing samples
+PerfRes = cell(length(expParam.totalMissSamplesList),length(expParam.solvers));
+factorsToTest = cell(length(expParam.totalMissSamplesList),length(expParam.solvers));
+outputFile = [expParam.destDir 'missSampTopoExp.mat'];
+for kSolver = 1:length(expParam.solvers)
+    fprintf('\n ------ Solver: %s ------\n\n',...
+        expParam.solvers(kSolver).name);
+    for kMiss = 1:length(expParam.totalMissSamplesList)
+        NMissSamples = expParam.totalMissSamplesList(kMiss);
+        factorsToTest{kMiss} = allFactors(NMissSamples);
+        PerfRes{kMiss,kSolver} = zeros([length(factorsToTest{kMiss}),expParam.NFramesPerHoleSize]);
+        for kFactor = 1:length(factorsToTest{kMiss})
+            holeSize = factorsToTest{kMiss}(kFactor);
+            NHoles = NMissSamples/holeSize;
+            fprintf('%d %d-length holes (%d missing samples = %.1f%%)\n',...
+                NHoles,holeSize,NMissSamples,NMissSamples/expParam.N*100)
+            problemParameters.holeSize = holeSize;
+            problemParameters.NHoles = NHoles;
+            for kFrame = 1:expParam.NFramesPerHoleSize
+                %% load audio frame
+                xFrame = wavread(...
+                    wavFiles{frameParam.kFrameFile(kFrame)},...
+                    frameParam.kFrameBegin(kFrame)+[0,expParam.N-1]);
+                
+                %% generate problem
+                [problemData, solutionData] = ...
+                    generateMissingGroupsProblem(xFrame,problemParameters);
+                
+                %% solve problem
+                xEst = ...
+                    expParam.solvers(kSolver).inpaintFrame(...
+                    problemData,...
+                    expParam.solvers(kSolver).param);
+                
+                %% compute and store performance
+                [SNRAll, SNRmiss] = ...
+                    SNRInpaintingPerformance(...
+                    solutionData.xClean,...
+                    problemData.x,...
+                    xEst,...
+                    problemData.IMiss);
+                PerfRes{kMiss,kSolver}(kFactor,kFrame) = SNRmiss(2);
+                
+            end
+        end
+        save(outputFile,'PerfRes','expParam');
+    end
+end
+
+figure
+Nrows = floor(sqrt(length(expParam.solvers)));
+Ncols = ceil(sqrt(length(expParam.solvers))/Nrows);
+cmap = lines;
+for kSolver = 1:length(expParam.solvers)
+    subplot(Nrows,Ncols,kSolver)
+    hold on,grid on
+    for kMiss = 1:length(expParam.totalMissSamplesList)
+        plot(factorsToTest{kMiss},mean(PerfRes{kMiss,kSolver},2),...
+            'color',cmap(kMiss,:));
+    end
+    title(expParam.solvers(kSolver).name)
+end
+return
+
+function m = allFactors(n)
+% Find the list of all factors (not only prime factors)
+
+primeFactors = factor(n);
+
+degrees = zeros(size(primeFactors));
+
+for k=1:length(degrees)
+    degrees(k) = sum(primeFactors==primeFactors(k));
+end
+
+[primeFactors, I] = unique(primeFactors);
+degrees = degrees(I);
+
+D = (0:degrees(1)).';
+for k=2:length(degrees)
+    Dk = ones(size(D,1),1)*(0:degrees(k));
+    D = [repmat(D,degrees(k)+1,1),Dk(:)];
+end
+
+m = unique(sort(prod((ones(size(D,1),1)*primeFactors).^D,2)));
+
+return
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/toolboxes/AudioInpaintingToolbox/Problems/generateDeclippingProblem.m	Thu Jul 21 14:27:47 2011 +0100
@@ -0,0 +1,124 @@
+function [problemData, solutionData] = generateDeclippingProblem(x,clippingLevel,GR)
+%
+%
+% Usage:
+%
+%
+% Inputs:
+%          - 
+%          - 
+%          - 
+%          - 
+%          - 
+%          - 
+%          - 
+%          - 
+%
+% Outputs:
+%          - 
+%          - 
+%          - 
+%          - 
+%
+% Note that the CVX library is needed.
+%
+% -------------------
+%
+% Audio Inpainting toolbox
+% Date: June 28, 2011
+% By Valentin Emiya, Amir Adler, Maria Jafari
+% This code is distributed under the terms of the GNU Public License version 3 (http://www.gnu.org/licenses/gpl.txt).
+% Generate a clipping problem: normalize and clip a signal.
+%
+% Usage:
+%   [problemData, solutionData] = makeClippedSignal(x,clippingLevel,GR)
+%
+% Inputs:
+%   - x: input signal (may be multichannel)
+%   - clippingLevel: clipping level, between 0 and 1
+%   - GR (default: false): flag to generate an optional graphical display
+%
+% Outputs:
+%   - problemData.x: clipped signal
+%   - problemData.IMiss: boolean vector (same size as problemData.x) that indexes clipped
+%   samples
+%   - problemData.clipSizes: size of the clipped segments (not necessary
+%   for solving the problem)
+%   - solutionData.xClean: clean signal (input signal after normalization
+%
+% Note that the input signal is normalized to 0.9999 (-1 is not allowed in
+% wav files) to provide problemData.x and solutionData.xClean.
+
+if nargin<3 || isempty(GR)
+    GR = false;
+end
+
+%% Normalization
+xMax = 0.9999;
+solutionData.xClean = x/max(abs(x(:)))*xMax;
+clippingLevel = clippingLevel*xMax;
+
+%% Clipping (hard threshold)
+problemData.x = min(max(solutionData.xClean,-clippingLevel),clippingLevel);
+problemData.IMiss = abs(problemData.x)>=clippingLevel; % related indices
+
+%% Size of the clipped segments
+problemData.clipSizes = diff(problemData.IMiss);
+if problemData.clipSizes(find(problemData.clipSizes,1,'first'))==-1,problemData.clipSizes = [1;problemData.clipSizes]; end
+if problemData.clipSizes(find(problemData.clipSizes,1,'last'))==1,problemData.clipSizes = [problemData.clipSizes;-1]; end
+problemData.clipSizes = diff(find(problemData.clipSizes));
+problemData.clipSizes = problemData.clipSizes(1:2:end);
+
+%% Optional graphical display
+if GR
+    
+    % Plot histogram of the sizes of the clipped segments
+    if ~isempty(problemData.clipSizes)
+        figure
+        hist(problemData.clipSizes,1:max(problemData.clipSizes))
+        title('Size of missing segments')
+        xlabel('Size'),ylabel('# of segments')
+    end
+    
+    t = (0:length(solutionData.xClean)-1); % time scale in samples
+    
+    % Plot original and clipped signals
+    figure
+    plot(t,solutionData.xClean,'',t,problemData.x,'')
+    legend('original','clipped')
+    
+    % Scatter plot between original and clipped signals
+    figure
+    plot(solutionData.xClean,problemData.x,'.')
+    xlabel('Original signal'),ylabel('Clipped signal')
+    
+    % Spectrograms
+    N = 512;
+    w = hann(N);
+    fs = 1;
+    NOverlap = round(.8*N);
+    nfft = 2^nextpow2(N)*2*2;
+    figure
+    subplot(3,3,[1,4])
+    spectrogram(solutionData.xClean,w,NOverlap,nfft,fs,'yaxis')
+    title('Original')
+    xlim(t([1,end]))
+    cl = get(gca,'clim');
+    set(gca,'clim',cl);
+    subplot(3,3,[1,4]+1)
+    spectrogram(problemData.x,w,NOverlap,nfft,fs,'yaxis')
+    title('Clipped')
+    set(gca,'clim',cl);
+    subplot(3,3,[1,4]+2)
+    spectrogram(solutionData.xClean-problemData.x,w,NOverlap,nfft,fs,'yaxis')
+    title('Error (=original-clipped)')
+    set(gca,'clim',cl);
+    subplot(3,3,7)
+    plot(t,solutionData.xClean,'');xlim(t([1,end]))
+    subplot(3,3,8)
+    plot(t,solutionData.xClean,'',t,problemData.x,'');xlim(t([1,end]))
+    subplot(3,3,9)
+    plot(t,solutionData.xClean-problemData.x,'');xlim(t([1,end]))
+end
+
+return
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/toolboxes/AudioInpaintingToolbox/Problems/generateMissingGroupsProblem.m	Thu Jul 21 14:27:47 2011 +0100
@@ -0,0 +1,126 @@
+function [problemData, solutionData] = generateMissingGroupsProblem(xFrame,problemParameters)
+%
+%
+% Usage:
+%
+%
+% Inputs:
+%          - 
+%          - 
+%          - 
+%          - 
+%          - 
+%          - 
+%          - 
+%          - 
+%
+% Outputs:
+%          - 
+%          - 
+%          - 
+%          - 
+%
+% Note that the CVX library is needed.
+%
+% -------------------
+%
+% Audio Inpainting toolbox
+% Date: June 28, 2011
+% By Valentin Emiya, Amir Adler, Maria Jafari
+% This code is distributed under the terms of the GNU Public License version 3 (http://www.gnu.org/licenses/gpl.txt).
+
+% Generate a clipping problem: normalize and clip a signal.
+%
+% Usage:
+%   [problemData, solutionData] = makeClippedSignal(x,clippingLevel,GR)
+%
+% Inputs:
+%   - x: input signal (may be multichannel)
+%   - clippingLevel: clipping level, between 0 and 1
+%   - GR (default: false): flag to generate an optional graphical display
+%
+% Outputs:
+%   - problemData.xClipped: clipped signal
+%   - problemData.IClipped: boolean vector (same size as problemData.xClipped) that indexes clipped
+%   samples
+%   - problemData.clipSizes: size of the clipped segments (not necessary
+%   for solving the problem)
+%   - solutionData.xClean: clean signal (input signal after normalization
+%
+% Note that the input signal is normalized to 0.9999 (-1 is not allowed in
+% wav files) to provide problemData.xClipped and solutionData.xClean.
+
+%function [xFrame,xFrameObs,Imiss] = aux_getFrame(xFrame,holeSize,NHoles)%,param,frameParam,kFrame)
+
+N = length(xFrame); % frame length
+
+% Load frame
+% xFrame = wavread(param.wavFiles{frameParam.kFrameFile(kFrame)},frameParam.kFrameBegin(kFrame)+[0,N-1]);
+
+% Window
+%xFrame = xFrame.*param.wa(N).';
+
+% Normalize
+xFrame = xFrame/max(abs(xFrame));
+
+% Build random measurement matrix with NHoles of length holeSize
+[M IMiss] = makeRandomMeasurementMatrix(N,problemParameters.NHoles,problemParameters.holeSize);
+xFrameObs = xFrame;
+xFrameObs(IMiss) = 0;
+
+problemData.x = xFrameObs;
+problemData.IMiss = IMiss;
+solutionData.xClean = xFrame;
+return
+
+
+function [M Im] = makeRandomMeasurementMatrix(N,NMissingBlocks,blockSize)
+% [M Im] = makeRandomMeasurementMatrix(N,NMissingBlocks,blockSize)
+%    Create a random measurement matrix M where NMissingBlocks blocks with 
+%    size blockSize each are randomly inserted. The boolean vector Im 
+%    indicates the location of the NMissingBlocks*blockSize missing
+%    samples.
+%    If the number of missing samples is large, there may be very few solutions
+%    so that after a few failing attempts, the results is generated in a deterministic
+%    way (groups separated by one sample). This happens for example when the number of
+%    missing samples is close to half the frame length, for isolated samples (blockSize=1).
+
+nTry = 1;
+while true
+   try
+      Im = false(N,1);
+      
+      possibleStart = 1:N-blockSize+1;
+      
+      for k=1:NMissingBlocks
+         if isempty(possibleStart)
+            error('makeRandomMeasurementMatrix:tooMuchMissingSamples',...
+               'Too much missing segments');
+         end
+         I = ceil(rand*(length(possibleStart)-1));
+         I = possibleStart(I);
+         Im(I+(0:blockSize-1)) = true;
+         possibleStart(possibleStart>=I-blockSize & possibleStart<=I+blockSize) = [];
+      end
+      break
+   catch
+      fprintf('makeRandomMeasurementMatrix:retry (%d)\n',nTry);
+      nTry = nTry+1;
+      if nTry>10
+            Im = [true(blockSize,NMissingBlocks);false(1,NMissingBlocks)];
+            Im = Im(:);
+            while length(Im)<N
+               N0 = sum(~Im);
+               I0 = find(~Im,randi(N0),'first');
+               I0 = I0(end);
+               Im = [Im(1:I0);false;Im(I0+1:end)];
+            end
+            Im = circshift(Im,randi(N));
+         break;
+      end
+   end
+end
+M = eye(N);
+M(Im,:) = [];
+
+return
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/toolboxes/AudioInpaintingToolbox/Solvers/inpaintFrame_OMP.m	Thu Jul 21 14:27:47 2011 +0100
@@ -0,0 +1,77 @@
+function y = inpaintFrame_OMP(problemData,param)
+% Inpainting method based on OMP 
+%
+% Usage: y = inpaintFrame_OMP(problemData,param)
+%
+%
+% Inputs:
+%          - problemData.x: observed signal to be inpainted
+%          - problemData.Imiss: Indices of clean samples
+%          - param.D - the dictionary matrix (optional if param.D_fun is set)
+%          - param.D_fun - a function handle that generates the dictionary 
+%          matrix param.D if param.D is not given. See, e.g., DCT_Dictionary.m and Gabor_Dictionary.m
+%          - param.wa - Analysis window
+%
+% Outputs:
+%          - y: estimated frame
+%
+%
+% -------------------
+%
+% Audio Inpainting toolbox
+% Date: June 28, 2011
+% By Valentin Emiya, Amir Adler, Michael Elad, Maria Jafari
+% This code is distributed under the terms of the GNU Public License version 3 (http://www.gnu.org/licenses/gpl.txt).
+% ========================================================
+% To do next: use a faster implementation of OMP
+
+%% Load data and parameters
+
+x = problemData.x;
+IObs = find(~problemData.IMiss);
+p.N = length(x);
+   E2 = param.OMPerr^2;
+   E2M=E2*length(IObs);
+
+   wa = param.wa(param.N);
+
+
+%% Build and normalized dictionary
+% build the dictionary matrix if only the dictionary generation function is given
+if ~isfield(param,'D')
+   param.D = param.D_fun(param);
+end
+Dict=param.D(IObs,:);
+W=1./sqrt(diag(Dict'*Dict));
+Dict=Dict*diag(W);
+xObs=x(IObs);
+
+%% OMP iterations
+residual=xObs;
+maxNumCoef = param.sparsityDegree;
+indx = [];
+currResNorm2 = E2M*2; % set a value above the threshold in order to have/force at least one loop executed
+j = 0;
+while currResNorm2>E2M && j < maxNumCoef,
+   j = j+1;
+   proj=Dict'*residual;
+   [dum pos] = max(abs(proj));
+   indx(j)=pos;
+   
+   a=pinv(Dict(:,indx(1:j)))*xObs;
+   
+   residual=xObs-Dict(:,indx(1:j))*a;
+   currResNorm2=sum(residual.^2);
+end
+
+%% Frame Reconstruction
+indx(length(a)+1:end) = [];
+
+Coeff = sparse(size(param.D,2),1);
+if (~isempty(indx))
+   Coeff(indx) = a;
+   Coeff = W.*Coeff;
+end
+y = param.D*Coeff;
+
+return
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/toolboxes/AudioInpaintingToolbox/Solvers/inpaintFrame_OMP_Gabor.m	Thu Jul 21 14:27:47 2011 +0100
@@ -0,0 +1,93 @@
+function [y , Coeff]= inpaintFrame_OMP_Gabor(problemData,param)
+% Inpainting method based on OMP using the Gabor dictionary
+% generated by Gabor_Dictionary.m. The method jointly selects
+% cosine and sine atoms at the same frequency
+%
+% Usage: y = inpaintFrame_OMP_Gabor(problemData,param)
+%
+%
+% Inputs:
+%          - problemData.x: observed signal to be inpainted
+%          - problemData.Imiss: Indices of clean samples
+%          - param.D - the dictionary matrix (optional if param.D_fun is set)
+%          - param.D_fun - a function handle that generates the dictionary 
+%          matrix param.D if param.D is not given. See Gabor_Dictionary.m
+%          - param.wa - Analysis window
+%
+% Outputs:
+%          - y: estimated frame
+%
+%
+% -------------------
+%
+% Audio Inpainting toolbox
+% Date: June 28, 2011
+% By Valentin Emiya, Amir Adler, Michael Elad, Maria Jafari
+% This code is distributed under the terms of the GNU Public License version 3 (http://www.gnu.org/licenses/gpl.txt).
+% ========================================================
+% To do next: use a faster implementation of OMP
+
+
+%% Load data and parameters
+
+
+x = problemData.x;
+IObs = find(~problemData.IMiss);
+p.N = length(x);
+E2 = param.OMPerr^2;
+E2M=E2*length(IObs);
+wa = param.wa(param.N);
+
+%% Build and normalized dictionary
+% build the dictionary matrix if only the dictionary generation function is given
+if ~isfield(param,'D')
+    param.D = param.D_fun(param);
+end
+Dict=param.D(IObs,:);
+W=1./sqrt(diag(Dict'*Dict));
+Dict=Dict*diag(W);
+Dict1 = Dict(:,1:end/2);
+Dict2 = Dict(:,end/2+1:end);
+Dict1Dict2 = sum(Dict1.*Dict2);
+n12 = 1./(1-Dict1Dict2.^2);
+xObs=x(IObs);
+
+%% OMP iterations
+residual=xObs;
+maxNumCoef = param.sparsityDegree;
+indx = [];
+% currResNorm2 = sum(residual.^2);
+currResNorm2 = E2M*2; % set a value above the threshold in order to have/force at least one loop executed
+j = 0;
+while currResNorm2>E2M && j < maxNumCoef,
+    j = j+1;
+    proj=residual'*Dict;
+    proj1 = proj(1:end/2);
+    proj2 = proj(end/2+1:end);
+    
+    alpha_j = (proj1-Dict1Dict2.*proj2).*n12;
+    beta_j = (proj2-Dict1Dict2.*proj1).*n12;
+    
+    err_j = sum(abs(repmat(residual,1,size(Dict1,2))-Dict1*sparse(diag(alpha_j))-Dict2*sparse(diag(beta_j))).^2);
+    [dum pos] = min(err_j);
+    
+    indx(end+1)=pos;
+    indx(end+1)=pos+size(Dict1,2);
+    a=pinv(Dict(:,indx(1:2*j)))*xObs;
+    residual=xObs-Dict(:,indx(1:2*j))*a;
+    currResNorm2=sum(residual.^2);
+end;
+
+%% Frame Reconstruction
+indx(length(a)+1:end) = [];
+
+Coeff = sparse(size(param.D,2),1);
+if (~isempty(indx))
+    Coeff(indx) = a;
+    Coeff = W.*Coeff;
+end
+y = param.D*Coeff;
+
+return
+
+
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/toolboxes/AudioInpaintingToolbox/Solvers/inpaintFrame_consOMP.m	Thu Jul 21 14:27:47 2011 +0100
@@ -0,0 +1,144 @@
+function y = inpaintFrame_consOMP(problemData,param)
+% Inpainting method based on OMP with a constraint
+% on the amplitude of the reconstructed samples an optional constraint
+% on the maximum value of the clipped samples
+%
+% Usage: y = inpaintFrame_consOMP(problemData,param)
+%
+%
+% Inputs:
+%          - problemData.x: observed signal to be inpainted
+%          - problemData.Imiss: Indices of clean samples
+%          - param.D - the dictionary matrix (optional if param.D_fun is set)
+%          - param.D_fun - a function handle that generates the dictionary 
+%          matrix param.D if param.D is not given. See, e.g., DCT_Dictionary.m and Gabor_Dictionary.m
+%          - param.wa - Analysis window
+%          - param.Upper_Limit - if present and non-empty this fiels
+%          indicates that an upper limit constraint is active and its
+%          integer value is such that
+%
+% Outputs:
+%          - y: estimated frame
+%
+% Note that the CVX library is needed.
+%
+% -------------------
+%
+% Audio Inpainting toolbox
+% Date: June 28, 2011
+% By Valentin Emiya, Amir Adler, Michael Elad, Maria Jafari
+% This code is distributed under the terms of the GNU Public License version 3 (http://www.gnu.org/licenses/gpl.txt).
+% ========================================================
+
+%% Load data and parameters
+
+x = problemData.x;
+IObs = find(~problemData.IMiss);
+p.N = length(x);
+E2 = param.OMPerr^2;
+E2M=E2*length(IObs);
+wa = param.wa(param.N);
+
+% build the dictionary matrix if only the dictionary generation function is given
+if ~isfield(param,'D')
+    param.D = param.D_fun(param);
+end
+
+
+% clipping level detection
+clippingLevelEst = max(abs(x(:)./wa(:)));
+
+IMiss = true(length(x),1);
+IMiss(IObs) = false;
+IMissPos = find(x>=0 & IMiss);
+IMissNeg = find(x<0 & IMiss);
+
+DictPos=param.D(IMissPos,:);
+DictNeg=param.D(IMissNeg,:);
+
+% Clipping level: take the analysis window into account
+wa_pos = wa(IMissPos);
+wa_neg = wa(IMissNeg);
+b_ineq_pos = wa_pos(:)*clippingLevelEst;
+b_ineq_neg = -wa_neg(:)*clippingLevelEst;
+if isfield(param,'Upper_Limit') && ~isempty(param.Upper_Limit)
+    b_ineq_pos_upper_limit = wa_pos(:)*param.Upper_Limit*clippingLevelEst;
+    b_ineq_neg_upper_limit = -wa_neg(:)*param.Upper_Limit*clippingLevelEst;
+else
+    b_ineq_pos_upper_limit = Inf;
+    b_ineq_neg_upper_limit = -Inf;
+end
+
+%%
+Dict=param.D(IObs,:);
+W=1./sqrt(diag(Dict'*Dict));
+Dict=Dict*diag(W);
+xObs=x(IObs);
+
+residual=xObs;
+maxNumCoef = param.sparsityDegree;
+indx = [];
+currResNorm2 = E2M*2; % set a value above the threshold in order to have/force at least one loop executed
+j = 0;
+while currResNorm2>E2M && j < maxNumCoef,
+    j = j+1;
+    proj=Dict'*residual;
+    [dum pos] = max(abs(proj));
+    indx(j)=pos;
+    a=pinv(Dict(:,indx(1:j)))*xObs;
+    residual=xObs-Dict(:,indx(1:j))*a;
+    currResNorm2=sum(residual.^2);
+end;
+
+
+if isinf(b_ineq_pos_upper_limit)
+    %% CVX code
+    cvx_begin
+    cvx_quiet(true)
+    variable a(j)
+    %minimize( sum(square(xObs-Dict*a)))
+    minimize(norm(Dict(:,indx)*a-xObs))
+    subject to
+    DictPos(:,indx)*(W(indx).*a) >= b_ineq_pos
+    DictNeg(:,indx)*(W(indx).*a) <= b_ineq_neg
+    cvx_end
+    if cvx_optval>1e3
+        cvx_begin
+        cvx_quiet(true)
+        variable a(j)
+        minimize(norm(Dict(:,indx)*a-xObs))
+        cvx_end
+    end
+else
+    %% CVX code
+    cvx_begin
+    cvx_quiet(true)
+    variable a(j)
+    %minimize( sum(square(xObs-Dict*a)))
+    minimize(norm(Dict(:,indx)*a-xObs))
+    subject to
+    DictPos(:,indx)*(W(indx).*a) >= b_ineq_pos
+    DictNeg(:,indx)*(W(indx).*a) <= b_ineq_neg
+    DictPos(:,indx)*(W(indx).*a) <= b_ineq_pos_upper_limit
+    DictNeg(:,indx)*(W(indx).*a) >= b_ineq_neg_upper_limit
+    cvx_end
+    if cvx_optval>1e3
+        cvx_begin
+        cvx_quiet(true)
+        variable a(j)
+        minimize(norm(Dict(:,indx)*a-xObs))
+        cvx_end
+    end
+end
+
+%% Frame Reconstruction
+indx(length(a)+1:end) = [];
+
+Coeff = sparse(size(param.D,2),1);
+if (~isempty(indx))
+    Coeff(indx) = a;
+    Coeff = W.*Coeff;
+end
+y = param.D*Coeff;
+
+return
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/toolboxes/AudioInpaintingToolbox/Solvers/inpaintFrame_consOMP_Gabor.m	Thu Jul 21 14:27:47 2011 +0100
@@ -0,0 +1,160 @@
+function y = inpaintFrame_consOMP_Gabor(problemData,param)
+% Inpainting method based on OMP with a constraint
+% on the amplitude of the reconstructed samples an optional constraint
+% on the maximum value of the clipped samples, and using the Gabor dictionary
+% generated by Gabor_Dictionary.m. The method jointly selects
+% cosine and sine atoms at the same frequency.
+%
+% Usage: y = inpaintFrame_consOMP_Gabor(problemData,param)
+%
+%
+% Inputs:
+%          - problemData.x: observed signal to be inpainted
+%          - problemData.Imiss: Indices of clean samples
+%          - param.D - the dictionary matrix (optional if param.D_fun is set)
+%          - param.D_fun - a function handle that generates the dictionary 
+%          matrix param.D if param.D is not given. See Gabor_Dictionary.m
+%          - param.wa - Analysis window
+%          - param.Upper_Limit - if present and non-empty this fiels
+%          indicates that an upper limit constraint is active and its
+%          integer value is such that
+%
+% Outputs:
+%          - y: estimated frame
+%
+% Note that the CVX library is needed.
+%
+% -------------------
+%
+% Audio Inpainting toolbox
+% Date: June 28, 2011
+% By Valentin Emiya, Amir Adler, Michael Elad, Maria Jafari
+% This code is distributed under the terms of the GNU Public License version 3 (http://www.gnu.org/licenses/gpl.txt).
+
+
+
+
+x = problemData.x;
+IObs = find(~problemData.IMiss);
+p.N = length(x);
+E2 = param.OMPerr^2;
+E2M=E2*length(IObs);
+wa = param.wa(param.N);
+
+% build the dictionary matrix if only the dictionary generation function is given
+if ~isfield(param,'D')
+    param.D = param.D_fun(param);
+end
+
+
+% clipping level detection
+clippingLevelEst = max(abs(x(:)./wa(:)));
+IMiss = true(length(x),1);
+IMiss(IObs) = false;
+IMissPos = find(x>=0 & IMiss);
+IMissNeg = find(x<0 & IMiss);
+
+DictPos=param.D(IMissPos,:);
+DictNeg=param.D(IMissNeg,:);
+
+% Clipping level: take the analysis window into account
+wa_pos = wa(IMissPos);
+wa_neg = wa(IMissNeg);
+b_ineq_pos = wa_pos(:)*clippingLevelEst;
+b_ineq_neg = -wa_neg(:)*clippingLevelEst;
+if isfield(param,'Upper_Limit') && ~isempty(param.Upper_Limit)
+    b_ineq_pos_upper_limit = wa_pos(:)*param.Upper_Limit*clippingLevelEst;
+    b_ineq_neg_upper_limit = -wa_neg(:)*param.Upper_Limit*clippingLevelEst;
+else
+    b_ineq_pos_upper_limit = Inf;
+    b_ineq_neg_upper_limit = -Inf;
+end
+
+%%
+Dict=param.D(IObs,:);
+W=1./sqrt(diag(Dict'*Dict));
+Dict=Dict*diag(W);
+Dict1 = Dict(:,1:end/2);
+Dict2 = Dict(:,end/2+1:end);
+Dict1Dict2 = sum(Dict1.*Dict2);
+n12 = 1./(1-Dict1Dict2.^2);
+xObs=x(IObs);
+%K = size(param.D,2);
+
+residual=xObs;
+maxNumCoef = param.sparsityDegree;
+indx = [];
+% currResNorm2 = sum(residual.^2);
+currResNorm2 = E2M*2; % set a value above the threshold in order to have/force at least one loop executed
+j = 0;
+while currResNorm2>E2M && j < maxNumCoef,
+    j = j+1;
+    proj=residual'*Dict;
+    proj1 = proj(1:end/2);
+    proj2 = proj(end/2+1:end);
+    
+    alpha_j = (proj1-Dict1Dict2.*proj2).*n12;
+    beta_j = (proj2-Dict1Dict2.*proj1).*n12;
+    
+    err_j = sum(abs(repmat(residual,1,size(Dict1,2))-Dict1*sparse(diag(alpha_j))-Dict2*sparse(diag(beta_j))).^2);
+    [dum pos] = min(err_j);
+    
+    indx(end+1)=pos;
+    indx(end+1)=pos+size(Dict1,2);
+    a=pinv(Dict(:,indx(1:2*j)))*xObs;
+    residual=xObs-Dict(:,indx(1:2*j))*a;
+    currResNorm2=sum(residual.^2);
+end;
+
+%% Constrained reestimation of the non-zero coefficients
+j = length(indx);
+if isinf(b_ineq_pos_upper_limit)
+    %% CVX code
+    cvx_begin
+    cvx_quiet(true)
+    variable a(j)
+    minimize(norm(Dict(:,indx)*a-xObs))
+    subject to
+    DictPos(:,indx)*(W(indx).*a) >= b_ineq_pos
+    DictNeg(:,indx)*(W(indx).*a) <= b_ineq_neg
+    cvx_end
+    if cvx_optval>1e3
+        cvx_begin
+        cvx_quiet(true)
+        variable a(j)
+        minimize(norm(Dict(:,indx)*a-xObs))
+        cvx_end
+    end
+else
+    %% CVX code
+    cvx_begin
+    cvx_quiet(true)
+    variable a(j)
+    minimize(norm(Dict(:,indx)*a-xObs))
+    subject to
+    DictPos(:,indx)*(W(indx).*a) >= b_ineq_pos
+    DictNeg(:,indx)*(W(indx).*a) <= b_ineq_neg
+    DictPos(:,indx)*(W(indx).*a) <= b_ineq_pos_upper_limit
+    DictNeg(:,indx)*(W(indx).*a) >= b_ineq_neg_upper_limit
+    cvx_end
+    if cvx_optval>1e3
+        cvx_begin
+        cvx_quiet(true)
+        variable a(j)
+        minimize(norm(Dict(:,indx)*a-xObs))
+        cvx_end
+    end
+end
+
+%% Frame Reconstruction
+indx(length(a)+1:end) = [];
+
+Coeff = sparse(size(param.D,2),1);
+if (~isempty(indx))
+    Coeff(indx) = a;
+    Coeff = W.*Coeff;
+end
+y = param.D*Coeff;
+
+return
+
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/toolboxes/AudioInpaintingToolbox/Solvers/inpaintFrame_janssenInterpolation.m	Thu Jul 21 14:27:47 2011 +0100
@@ -0,0 +1,82 @@
+function y = inpaintFrame_janssenInterpolation(problemData,param)
+% Frame-level inpainting method based on the linear prediction by
+% Janssen.
+%
+% Usage: xEst = inpaintFrame_janssenInterpolation(problemData,param)
+%
+%
+% Inputs:
+%          - problemData.x - observed signal to be inpainted
+%          - problemData.Imiss - Indices of clean samples
+%          - param.p - Order of the autoregressive model used in
+%          for linear prediction
+%
+% Outputs:
+%          - y: estimated frame
+%
+% References:
+% 
+% -------------------
+%
+% Audio Inpainting toolbox
+% Date: June 28, 2011
+% By Valentin Emiya, Amir Adler, Maria Jafari
+% This code is distributed under the terms of the GNU Public License version 3 (http://www.gnu.org/licenses/gpl.txt).
+
+s = problemData.x;
+N = length(s);
+Im = find(problemData.IMiss);
+IObs = find(~problemData.IMiss);
+M = length(Im);
+Im = sort(Im); Im = Im(:); % Im: indexes of missing samples
+s(Im) = 0;
+
+if nargin<2 || ~isfield(param,'p')
+   p = min(3*M+2,round(N/3));
+else
+   p = param.p;
+end
+if nargin<2 || ~isfield(param,'GR')
+   param.GR = false;
+end
+if nargin<2 || ~isfield(param,'NIt')
+   NIt = 100;
+else
+   NIt = param.NIt;
+end
+
+
+IAA = abs(Im*ones(1,N)-ones(M,1)*(1:N));
+IAA1 = IAA<=p;
+AA = zeros(size(IAA));
+
+if param.GR
+   figure;
+   hold on
+end
+for k=1:NIt
+   
+   % Re-estimation of LPC
+   aEst = lpc(s,p).';
+   
+   % Re-estimation of the missing samples
+   b = aEst.'*hankel(aEst.',[aEst(end),zeros(1,p)]);
+   AA(IAA1) = b(IAA(IAA1)+1);
+%    xEst = -inv(AA(:,Im))*AA(:,IObs)*s(IObs); % use Chol to invert matrix
+   [R flagErr] = chol(AA(:,Im));
+   if flagErr
+      %       xEst = - AA(:,Im)\(AA(:,IObs)*s(IObs));
+      xEst = -inv(AA(:,Im))*AA(:,IObs)*s(IObs);
+   else
+      xEst = -R\(R'\(AA(:,IObs)*s(IObs)));
+   end
+   s(Im) = xEst;
+   if param.GR
+      e = filter(aEst,1,s);
+      plot(k,10*log10(mean(e(p+1:end).^2)),'o')
+   end
+end
+
+y = s;
+
+return
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/toolboxes/AudioInpaintingToolbox/Solvers/inpaintSignal_IndependentProcessingOfFrames.m	Thu Jul 21 14:27:47 2011 +0100
@@ -0,0 +1,372 @@
+function [ReconstSignal1 ReconstSignal2] = inpaintSignal_IndependentProcessingOfFrames(problemData,param)
+%
+%
+% Usage:
+%
+%
+% Inputs:
+%          - 
+%          - 
+%          - 
+%          - 
+%          - 
+%          - 
+%          - 
+%          - 
+%
+% Outputs:
+%          - 
+%          - 
+%          - 
+%          - 
+%
+% Note that the CVX library is needed.
+%
+% -------------------
+%
+% Audio Inpainting toolbox
+% Date: June 28, 2011
+% By Valentin Emiya, Amir Adler, Maria Jafari
+% This code is distributed under the terms of the GNU Public License version 3 (http://www.gnu.org/licenses/gpl.txt).
+% ========================================================
+% Perform Audio De-clipping with overlapping blocks
+% Synthesis Approach, union of overcomplete DCT dictionary
+% Date: 14 Apr. 2010
+% Inputs:
+%          - x: Clipped signal
+%          - ClipMask: Indices of clipped samples
+%          - Optional parameters [and default values]:
+%             - param.N: frame length [256]
+%             - param.frameOverlapFactor: overlap factor between frames [2]
+%             - param.wa: weighting analysis window [@sineWin]
+%             - param.ws: weighting synthesis window [@sineWin]
+%             - param.OMPerr: error threshold to stop OMP iterations [0.001]
+%             - param.sparsityDegree: max number of non-zero components to
+%             stop OMP iterations [param.N/4];
+%             - other fields: see the documentation of UDCT_Dictionary
+%
+% Outputs:
+%          ReconstSignal1 - reconstructed signal (all samples generated
+%          from the synthesis model)
+%          ReconstSignal2 - reconstructed signal (only clipped samples are generated
+%          from the synthesis model)
+%
+% By Valentin Emiya - SMALL Project, 2010
+% 
+% ========================================================
+
+% Check parameters
+defaultParam.N = 256;
+defaultParam.OLA_frameOverlapFactor = 4;
+defaultParam.wa = @wSine;
+defaultParam.OLA_ws = @wSine;
+defaultParam.OLA_par_waitingTime_mainProcess = 0.2;
+defaultParam.OLA_par_waitingTime_thread = 0.2;
+defaultParam.OLA_par_frameBlockSize = 1;
+defaultParam.TCPIP_port = 3000;
+defaultParam.COM_DISP = false;
+defaultParam.STATE_DISP = false;
+
+if nargin<2
+    param = defaultParam;
+else
+    names = fieldnames(defaultParam);
+    for k=1:length(names)
+        if ~isfield(param,names{k}) || isempty(param.(names{k}))
+            param.(names{k}) = defaultParam.(names{k});
+        end
+    end
+end
+
+x = problemData.x;
+ClipMask = find(problemData.IMiss);
+
+% According to this flag, switch between a parallel multithread processing
+% and a singlethread processing. This can fasten the computations but does
+% not affect the results.
+if param.MULTITHREAD_FRAME_PROCESSING
+   [ReconstSignal1 ReconstSignal2] = multithreadProcessing(x,ClipMask,param);
+else
+   [ReconstSignal1 ReconstSignal2] = singlethreadProcessing(x,ClipMask,param);
+end
+
+return;
+
+function [ReconstSignal1 ReconstSignal2] = singlethreadProcessing(x,ClipMask,param)
+% ========================================================
+% Overlap-and-add processing of a signal with missing samples.
+% Decomposition into overlapping frames, processing of each
+% frame independently and OLA reconstruction.
+% Date: 01 Jun. 2010
+% Inputs:
+%          - x: Clipped signal
+%          - ClipMask: Indices of clipped samples
+%          - Optional parameters [and default values]:
+%             - param.N: frame length [256]
+%             - param.inpaintFrame: function handle for inpainting a frame
+%             [@inpaintFrame_OMP]
+%             - param.OLA_frameOverlapFactor: overlap factor between frames [2]
+%             - param.wa: weighting analysis window [@sineWin]
+%             - param.OLA_ws: weighting synthesis window [@sineWin]
+%             - param.SKIP_CLEAN_FRAMES: flag to skip frames with no
+%             missing samples [true]
+%             - other fields: see the documentation the inpainting method
+%
+% Outputs:
+%          ReconstSignal1 - reconstructed signal (all samples generated
+%          from the synthesis model)
+%          ReconstSignal2 - reconstructed signal (only clipped samples are generated
+%          from the synthesis model)
+%
+% By Amir Adler, Maria Jafari, Valentin Emiya - SMALL Project, 2010
+% 
+% ========================================================
+
+% Check parameters
+defaultParam.N = 256;
+defaultParam.inpaintFrame = @inpaintFrame_OMP;
+defaultParam.OLA_frameOverlapFactor = 2;
+defaultParam.wa = @wSine;
+defaultParam.ws = @wSine;
+defaultParam.SKIP_CLEAN_FRAMES = true;
+
+if nargin<3
+    param = defaultParam;
+else
+    names = fieldnames(defaultParam);
+    for k=1:length(names)
+        if ~isfield(param,names{k}) || isempty(param.(names{k}))
+            param.(names{k}) = defaultParam.(names{k});
+        end
+    end
+end
+% if ~isfield(param,'D')
+%    param.D = param.D_fun(param);
+% end
+
+bb=param.N; % block size
+
+% modify signal length to accommodate integer number of blocks
+L=floor(length(x)/bb)*bb;
+x=x(1:L);
+ClipMask(ClipMask>L) = [];
+
+% Extracting the signal blocks with 50% overlap
+Ibegin = (1:bb/param.OLA_frameOverlapFactor:length(x)-bb);
+if Ibegin(end)~=L-bb+1
+    Ibegin(end+1) = L-bb+1;
+end
+Iblk = ones(bb,1)*Ibegin+(0:bb-1).'*ones(size(Ibegin));
+wa = param.wa(bb); % analysis window
+xFrames=diag(wa)*x(Iblk);
+
+% Generating the block mask
+Mask=ones(size(x));
+Mask(ClipMask)=0;
+blkMask=Mask(Iblk);
+
+% Declipping the Patches
+[n,P]=size(xFrames);
+
+if ~isdeployed
+    h=waitbar(0,'Processing each frame...');
+end
+Reconst = zeros(n,P);
+co = zeros(512,P);
+for k=1:1:P,
+    if ~isdeployed
+        waitbar(k/P);
+    end
+    if param.SKIP_CLEAN_FRAMES && all(blkMask(:,k))
+        continue
+    end
+    frameProblemData.x = xFrames(:,k);
+    frameProblemData.IMiss = ~blkMask(:,k);
+    
+    [Reconst(:,k)]= ...
+        param.inpaintFrame(frameProblemData,param);
+   
+end;
+if ~isdeployed
+    close(h);
+end
+
+% Overlap and add
+
+% The completly reconstructed signal
+ReconstSignal1 = zeros(size(x));
+ws = param.OLA_ws(bb); % synthesis window
+wNorm = zeros(size(ReconstSignal1));
+for k=1:size(Iblk,2)
+    ReconstSignal1(Iblk(:,k)) = ReconstSignal1(Iblk(:,k)) + Reconst(:,k).*ws(:);
+    wNorm(Iblk(:,k)) = wNorm(Iblk(:,k)) + ws(:).*wa(:);
+end
+ReconstSignal1 = ReconstSignal1./wNorm;
+
+% Only replace the clipped samples with the reconstructed ones
+ReconstSignal2=x;
+ReconstSignal2(ClipMask)=ReconstSignal1(ClipMask);
+
+return;
+
+function [ReconstSignal1 ReconstSignal2] = multithreadProcessing(x,ClipMask,param)
+% Send parameters to the threads
+% initParamFilename = [param.OLA_par_threadDir 'par_param.mat'];
+% save(initParamFilename,'param');
+
+bb=param.N; % block size
+
+% modify signal length to accommodate integer number of blocks
+L=floor(length(x)/bb)*bb;
+x=x(1:L);
+ClipMask(ClipMask>L) = [];
+
+% Extracting the signal blocks with 50% overlap
+Ibegin = (1:round(bb/param.OLA_frameOverlapFactor):length(x)-bb);
+if Ibegin(end)~=L-bb+1
+    Ibegin(end+1) = L-bb+1;
+end
+Iblk = ones(bb,1)*Ibegin+(0:bb-1).'*ones(size(Ibegin));
+wa = param.wa(bb); % analysis window
+xFrames=diag(wa)*x(Iblk);
+
+% Generating the block mask
+Mask=ones(size(x));
+Mask(ClipMask)=0;
+blkMask=Mask(Iblk);
+
+% Declipping the Patches
+if ~isdeployed && false
+    h=waitbar(0,'Processing each frame...');
+end
+[n,P]=size(xFrames);
+Reconst = NaN(n,P);
+% initializedThreads = [];
+
+% find the block of frames to process
+k_lists = {};
+kTrame = 1;
+while kTrame<=P
+    k_list = zeros(param.OLA_par_frameBlockSize,1);
+    ind = 0;
+    while ind<param.OLA_par_frameBlockSize && kTrame<=P
+        if param.SKIP_CLEAN_FRAMES && all(blkMask(:,kTrame))
+            kTrame=kTrame+1;
+            continue
+        end
+        ind = ind+1;
+        k_list(ind) = kTrame;
+        kTrame=kTrame+1;
+    end
+    if ind==0
+        break;
+    end
+    k_lists{end+1} = k_list(1:ind);
+end
+k_list_all = cell2mat(k_lists');
+
+% Create a server
+serverSocket = createServer(param);
+% Definition of the client states
+stateDef;
+
+param.COM_DISP = false;
+
+kBlock=1;
+initializedClientIDs = [];
+while any(isnan(Reconst(1,k_list_all)))
+        if ~isdeployed && false
+            waitbar(sum(~isnan(Reconst(1,k_list_all)))/length(k_list_all));
+        end
+    
+    % Wait for a new client
+    currentClient = waitClient(serverSocket);
+    
+    % Receive client state
+    clientIDState = readData(currentClient,param.COM_DISP);
+    clientID = clientIDState(1);
+    clientState = clientIDState(2);
+    switch clientState
+        case INIT
+            if param.STATE_DISP
+                fprintf('INIT %d\n',clientID);
+            end
+            if 0
+               sendData(currentClient,initParamFilename,param.COM_DISP);
+            else
+               sendData(currentClient,param,param.COM_DISP);
+            end
+            initializedClientIDs(end+1) = clientID;
+        case FREE
+            if ~ismember(clientID,initializedClientIDs)
+                sendData(currentClient,INIT_ORDER,param.COM_DISP); % INIT
+            elseif kBlock<=length(k_lists)
+                k_list = k_lists{kBlock};
+                if param.STATE_DISP
+                    fprintf('TO PROCESS %d:',clientID);
+                    arrayfun(@(x)fprintf(' %d',x),k_list);
+                    fprintf('\n');
+                end
+                sendData(currentClient,k_list,param.COM_DISP);
+                sendData(currentClient,xFrames(:,k_list),param.COM_DISP);
+                sendData(currentClient,find(blkMask(:,k_list)),param.COM_DISP);
+                kBlock = kBlock+1;
+            else
+                if param.STATE_DISP
+                    fprintf('WAIT %d\n',clientID);
+                end
+                sendData(currentClient,WAIT_ORDER,param.COM_DISP); % no data to process
+            end
+        case PROCESSED
+            processed_k_list = readData(currentClient,param.COM_DISP);
+            y = readData(currentClient,param.COM_DISP);
+            y = reshape(y,[],length(processed_k_list));
+            if param.STATE_DISP
+                fprintf('PROCESSED %d:',clientID);
+                arrayfun(@(x)fprintf(' %d',x),processed_k_list);
+                fprintf('\n');
+            end
+            if ~isempty(processed_k_list)
+                Reconst(:,processed_k_list) = y;
+            end
+        otherwise
+            error('switch:UndefinedClientState','Undefined client state');
+    end
+    
+    closeClientConnection(currentClient);
+end;
+
+% Close the server
+closeServer(serverSocket);
+
+if ~isdeployed && false
+    close(h);
+end
+
+% Overlap and add
+
+% The completly reconstructed signal
+ReconstSignal1 = zeros(size(x));
+ws = param.OLA_ws(bb); % synthesis window
+wNorm = zeros(size(ReconstSignal1));
+for k=1:size(Iblk,2)
+    ReconstSignal1(Iblk(:,k)) = ReconstSignal1(Iblk(:,k)) + Reconst(:,k).*ws(:);
+    wNorm(Iblk(:,k)) = wNorm(Iblk(:,k)) + ws(:).*wa(:);
+end
+ReconstSignal1 = ReconstSignal1./wNorm;
+
+% Only replace the clipped samples with the reconstructed ones
+ReconstSignal2=x;
+ReconstSignal2(ClipMask)=ReconstSignal1(ClipMask);
+
+killClients(param);
+
+return;
+
+% ========================================================
+% ========================================================
+
+
+
+% ========================================================
+% ========================================================
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/toolboxes/AudioInpaintingToolbox/Utils/dictionaries/DCT_Dictionary.m	Thu Jul 21 14:27:47 2011 +0100
@@ -0,0 +1,51 @@
+function D = DCT_Dictionary(param)
+% Windowed DCT dictionary
+%
+% Usage:
+%   D = DCT_Dictionary(param)
+%
+%
+% Inputs [and default values]:
+%   - param.N: frame length [256]
+%   - param.redundancyFactor: redundancy factor to adjust the number of
+%   frequencies [1]. The number of atoms in the dictionary equals 
+%   param.N*param.redundancyFactor
+%   - param.wd: weigthing window function [@wSine]
+%
+% Output:
+%   - Dictionary: D
+%
+%
+% -------------------
+%
+% Audio Inpainting toolbox
+% Date: June 28, 2011
+% By Valentin Emiya, Amir Adler, Maria Jafari
+% This code is distributed under the terms of the GNU Public License version 3 (http://www.gnu.org/licenses/gpl.txt).
+% Windowed DCT dictionary
+%
+
+% Check and load default parameters
+defaultParam.N = 256;
+defaultParam.redundancyFactor = 1;
+defaultParam.wd = @wSine;
+
+if nargin<1
+    param = defaultParam;
+else
+    names = fieldnames(defaultParam);
+    for k=1:length(names)
+        if ~isfield(param,names{k}) || isempty(param.(names{k}))
+            param.(names{k}) = defaultParam.(names{k});
+        end
+    end
+end
+K = param.N*param.redundancyFactor; % number of atoms
+wd = param.wd(param.N); % weigthing window
+u = 0:(param.N-1); % time
+k=0:K-1; % frequency
+D = diag(wd)*cos(pi/K*(u.'+1/2)*(k+1/2));
+
+% normalisation
+D = D*diag(1./sqrt(diag(D'*D)));
+return
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/toolboxes/AudioInpaintingToolbox/Utils/dictionaries/Gabor_Dictionary.m	Thu Jul 21 14:27:47 2011 +0100
@@ -0,0 +1,57 @@
+function D = Gabor_Dictionary(param)
+% Windowed Gabor dictionary. In this implementation, the dictionary matrix
+% is the concatenation of a DCT (left part of the matrix) and of a DST
+% (right part).
+% Note that one can use this dictionary 
+%  - either by constraining the simulaneous selection of cosine and sine
+%  atoms with same frequency in order to implement Gabor atoms;
+%  - or, without any selection constraint, by considering that the
+%  dictionary is not a Gabor dictionary but the concatenation of a DCT and 
+%  of a DST.
+%
+% Usage:
+%   D = Gabor_Dictionary(param)
+%
+% Inputs [and default values]:
+%   - param.N: frame length [256]
+%   - param.redundancyFactor: redundancy factor to adjust the number of
+%   frequencies [1]. The number of atoms in the dictionary equals 
+%   param.N*param.redundancyFactor
+%   - param.wd: weigthing window function [@wSine]
+%
+% Output:
+%   - Dictionary: D (cosine atoms followed by sine atoms)
+%
+%
+% -------------------
+%
+% Audio Inpainting toolbox
+% Date: June 28, 2011
+% By Valentin Emiya, Amir Adler, Maria Jafari
+% This code is distributed under the terms of the GNU Public License version 3 (http://www.gnu.org/licenses/gpl.txt).
+
+% Check and load default parameters
+defaultParam.N = 256;
+defaultParam.redundancyFactor = 1;
+defaultParam.wd = @wSine;
+
+if nargin<1
+    param = defaultParam;
+else
+    names = fieldnames(defaultParam);
+    for k=1:length(names)
+        if ~isfield(param,names{k}) || isempty(param.(names{k}))
+            param.(names{k}) = defaultParam.(names{k});
+        end
+    end
+end
+K = param.N*param.redundancyFactor; % number of atoms
+wd = param.wd(param.N); % weigthing window
+u = 0:(param.N-1); % time
+k=0:K/2-1; % frequency
+D = diag(wd)*[cos(2*pi/K*(u.'+1/2)*(k+1/2)),sin(2*pi/K*(u.'+1/2)*(k+1/2))];
+
+% normalisation
+D = D*diag(1./sqrt(diag(D'*D)));
+
+return
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/toolboxes/AudioInpaintingToolbox/Utils/evaluation/SNR.m	Thu Jul 21 14:27:47 2011 +0100
@@ -0,0 +1,26 @@
+function snr = SNR(xRef,xEst)
+% Signal-to-noise Ratio
+%
+% Usage: snr = SNR(xRef,xEst)
+%
+%
+% Inputs:
+%          - xRef - reference signal
+%          - xEst - estimate signal
+%
+% Outputs:
+%          - snr - SNR
+%
+%
+% -------------------
+%
+% Audio Inpainting toolbox
+% Date: June 28, 2011
+% By Valentin Emiya, Amir Adler, Maria Jafari
+% This code is distributed under the terms of the GNU Public License version 3 (http://www.gnu.org/licenses/gpl.txt).
+% Signal to noise ratio (SNR)
+
+% Add eps to avoid NaN/Inf values
+snr = 10*log10((sum(abs(xRef(:)).^2)+eps)/sum((abs(xRef(:)-xEst(:)).^2)+eps));
+
+return
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/toolboxes/AudioInpaintingToolbox/Utils/evaluation/SNRInpaintingPerformance.m	Thu Jul 21 14:27:47 2011 +0100
@@ -0,0 +1,43 @@
+function [SNRAll,SNRmiss] = SNRInpaintingPerformance(xRef,xObs,xEst,IMiss,DISP_FLAG)
+% Various SNR measures for inpainting performance
+%
+% Usage: [SNRAll,SNRmiss] = SNRInpaintingPerformance(xRef,xObs,xEst,IMiss,DISP_FLAG)
+%
+%
+% Inputs:
+%          - xRef - reference signal
+%          - xObs - observed signal
+%          - xEst - estimate signal
+%          - IMiss - location of missing data
+%
+% Outputs:
+%          - SNRAll - SNRAll(1) is the original SNR, between xRef and xObs; 
+%          SNRAll(2) is the SNR is the obtained SNR, between xRef and xEst
+%          - SNRmiss - the same as SNRAll but computed on the missing/restored
+%          samples only
+%
+%
+% -------------------
+%
+% Audio Inpainting toolbox
+% Date: June 28, 2011
+% By Valentin Emiya, Amir Adler, Maria Jafari
+% This code is distributed under the terms of the GNU Public License version 3 (http://www.gnu.org/licenses/gpl.txt).
+if nargin<5
+   DISP_FLAG = 0;
+end
+
+SNRAll = [SNR(xRef,xObs),SNR(xRef,xEst)];
+SNRmiss = [SNR(xRef(IMiss),xObs(IMiss)),SNR(xRef(IMiss),xEst(IMiss))];
+
+if DISP_FLAG>0
+   fprintf('SNR on all samples / clipped samples:\n');
+   fprintf('Original: %g dB / %g dB\n',...
+      SNRAll(1),...
+      SNRmiss(1));
+   fprintf('Estimate: %g dB / %g dB\n',...
+      SNRAll(2),...
+      SNRmiss(2));
+end
+
+return
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/toolboxes/AudioInpaintingToolbox/Utils/evaluation/exclude_audioQualityMeasures.m	Thu Jul 21 14:27:47 2011 +0100
@@ -0,0 +1,203 @@
+function [SNRx, PSM, PSMt, PESQ_MOS, EAQUAL_ODG, EAQUAL_DIX] = ...
+   audioQualityMeasures(xRef,xTest,fs,options)
+%
+%
+% Usage:
+%
+%
+% Inputs:
+%          - 
+%          - 
+%          - 
+%          - 
+%          - 
+%          - 
+%          - 
+%          - 
+%
+% Outputs:
+%          - 
+%          - 
+%          - 
+%          - 
+%
+% Note that the CVX library is needed.
+%
+% -------------------
+%
+% Audio Inpainting toolbox
+% Date: June 28, 2011
+% By Valentin Emiya, Amir Adler, Maria Jafari
+% This code is distributed under the terms of the GNU Public License version 3 (http://www.gnu.org/licenses/gpl.txt).
+% Computes a series of audio quality measures
+%
+% Usage:
+%    [PSM,PSMt] = ...
+%         audioQualityMeasures(xRef,xTest,fs,options)
+%
+% Inputs:
+%    - xRef: reference signal
+%    - xTest: test signal (to be compared to xRef)
+%    - fs: sampling frequency
+%    - optional parameters [default]:
+%        - options.ENABLE_PEMOQ: flag to use PEMO-Q or not [true]
+%        - options.pemoQExec: name of PEMO-Q executable ['"./PEMO-Q v1.1.2 demo/audioqual_demo.exe"']
+%        - options.PESQExec: name of PESQ executable [''./PESQ/pesq'']
+%        - options.EAQUALExec: name of EAQUAL (PEAQ) executable ['./EAQUAL/eaqual.exe']
+%
+% Note that PEMO-Q and EAQUAL programs are Windows executable and that
+% under unix, they can be used by means of wine (Windows Emulator). One
+% just have to have wine installed.
+%
+% Valentin Emiya, INRIA, 2010.
+
+
+%% default options
+defaultOptions.pemoQExec = '"C:/Program Files/PEMO-Q v1.2/audioqual.exe"'; % Full licensed version
+if isempty(dir(defaultOptions.pemoQExec))
+   defaultOptions.pemoQExec = '"./PEMO-Q v1.1.2 demo/audioqual_demo.exe"'; % Demo version
+end
+defaultOptions.ENABLE_PEMOQ = true;
+defaultOptions.PESQExec = './PESQ/pesq';
+
+if ispc
+   defaultOptions.EAQUALExec = './EAQUAL/eaqual.exe';
+else % if unix, use wine
+   defaultOptions.EAQUALExec = 'wine ./EAQUAL/eaqual.exe';
+   defaultOptions.pemoQExec = ['wine ' defaultOptions.pemoQExec];
+end
+
+if nargin<4
+   options = defaultOptions;
+else
+   names = fieldnames(defaultOptions);
+   for k=1:length(names)
+      if ~isfield(options,names{k}) || isempty(options.(names{k}))
+         options.(names{k}) = defaultOptions.(names{k});
+      end
+   end
+end
+
+if ~ischar(xRef) && ~ischar(xTest) && length(xRef)~=length(xTest)
+   warning('EVAL:LENGTH','Different lengths');
+   L = min(length(xRef),length(xTest));
+   xRef = xRef(1:L);
+   xTest = xTest(1:L);
+end
+
+if ischar(xRef)
+   refFile = xRef;
+   sRef = wavread(refFile);
+else
+   refFile = [tempname '.wav'];
+   sRef = xRef;
+   wavwrite(xRef,fs,refFile);
+end
+if ischar(xTest)
+   testFile = xTest;
+   sTest = wavread(testFile);
+else
+   testFile = [tempname '.wav'];
+   sTest = xTest;
+   wavwrite(xTest,fs,testFile);
+end
+
+
+SNRx = SNR(sRef,sTest);
+
+try
+   %     if ispc && options.ENABLE_PEMOQ
+   if options.ENABLE_PEMOQ
+      %% PEMO-Q
+      [PSM,PSMt] = aux_pemoq(refFile,testFile,options);
+   else
+      warning('audioQualityMeasures:noPQ','PEMO-Q is not available (requires Windows plateform)')
+      PSM = NaN;
+      PSMt = NaN;
+   end
+   
+   %% PESQ
+   PESQ_MOS = aux_pesq(refFile,testFile,options);
+   
+   %% EAQUAL (PEAQ)
+   [EAQUAL_ODG, EAQUAL_DIX] = aux_eaqual(refFile,testFile,options);
+   
+   if ~ischar(xRef)
+      %% Delete temporary files
+      delete(refFile);
+   end
+   if ~ischar(xTest)
+      delete(testFile);
+   end
+   
+catch
+   if ~ischar(xRef)
+      %% In case of error, delete the temporary files
+      delete(refFile);
+   end
+   if ~ischar(xTest)
+      delete(testFile);
+   end
+   rethrow;
+end
+
+
+return
+
+function [PSM,PSMt] = aux_pemoq(refFile,testFile,options)
+if ~isempty(findstr(options.pemoQExec, 'demo'))
+   fprintf('To unlock PEMO-Q demo, please enter the PIN shown in the new window\n');
+end
+[dum, pemo] = system(sprintf('%s %s %s [] [] 0 0 0', options.pemoQExec, refFile, testFile));
+pemo = regexp(pemo, 'PSM.? = \d*.\d*', 'match');
+PSM = str2double(cell2mat(regexp(pemo{1},'\d+.?\d*', 'match')));
+PSMt = str2double(cell2mat(regexp(pemo{2},'\d+.?\d*', 'match')));
+
+return
+
+function PESQ_MOS = aux_pesq(refFile,testFile,options)
+[dum fs] = wavread(refFile,'size');
+if ~ismember(fs,[8000 16000])
+   error('audioQualityMeasures:badFs',...
+      '8kHz or 16 kHz sampling frequency required for PESQ');
+end
+[dum,s] = system(sprintf('%s +%d %s %s',options.PESQExec,fs,refFile,testFile));
+PESQ_MOS = regexp(s, 'Prediction : PESQ_MOS = \d*.\d*', 'match');
+PESQ_MOS = str2double(PESQ_MOS{end}(length('Prediction : PESQ_MOS = ')+1:end));
+return
+
+function [EAQUAL_ODG, EAQUAL_DIX] = aux_eaqual(refFile,testFile,options)
+[dum fs] = wavread(refFile,'size');
+DELETE_FLAG = false;
+if fs<44100
+   warning('EAQUAL:BAD_FS',...
+      'Sampling frequency is too low for Eaqual (<44.1kHz).\nResampling first (result not relevant)');
+   DELETE_FLAG = true;
+   
+   x = wavread(refFile);
+   fsEaqual = 48000;
+   x = resample(x,fsEaqual,fs);
+   refFile = [tempname '.wav'];
+   wavwrite(x,fsEaqual,refFile);
+   
+   x = wavread(testFile);
+   fsEaqual = 48000;
+   x = resample(x,fsEaqual,fs);
+   testFile = [tempname '.wav'];
+   wavwrite(x,fsEaqual,testFile);
+   
+   fs = fsEaqual;
+end
+
+[dum,s] = system(sprintf('%s -fref %s -ftest %s  -srate %d',options.EAQUALExec,refFile,testFile,fs));
+
+EAQUAL_ODG = regexp(s, 'Resulting ODG:\t.?\d*(\.\d*)?', 'match');
+EAQUAL_ODG = str2double(EAQUAL_ODG{end}(length('Resulting ODG: ')+1:end));
+EAQUAL_DIX = regexp(s, 'Resulting DIX:\t.?\d*(\.\d*)?', 'match');
+EAQUAL_DIX = str2double(EAQUAL_DIX{end}(length('Resulting DIX: ')+1:end));
+
+if DELETE_FLAG
+   delete(refFile);
+   delete(testFile);
+end
+return
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/toolboxes/AudioInpaintingToolbox/Utils/evaluation/exclude_testAudioQualityMeasures.m	Thu Jul 21 14:27:47 2011 +0100
@@ -0,0 +1,70 @@
+function testAudioQualityMeasures
+%
+%
+% Usage:
+%
+%
+% Inputs:
+%          - 
+%          - 
+%          - 
+%          - 
+%          - 
+%          - 
+%          - 
+%          - 
+%
+% Outputs:
+%          - 
+%          - 
+%          - 
+%          - 
+%
+% Note that the CVX library is needed.
+%
+% -------------------
+%
+% Audio Inpainting toolbox
+% Date: June 28, 2011
+% By Valentin Emiya, Amir Adler, Maria Jafari
+% This code is distributed under the terms of the GNU Public License version 3 (http://www.gnu.org/licenses/gpl.txt).
+
+soundDir = './';
+
+[xRef fs] = wavread([soundDir 'xClean.wav']);
+
+testFiles = {'xClipped.wav','xEst2.wav','xEstInterp'};
+Nf = length(testFiles);
+
+SNR = zeros(Nf,1);
+PSM = zeros(Nf,1);
+PSMt = zeros(Nf,1);
+PESQ_MOS = zeros(Nf,1);
+EAQUAL_ODG = zeros(Nf,1);
+EAQUAL_DIX = zeros(Nf,1);
+
+options.ENABLE_PEMOQ = true;
+
+for kf = 1:Nf
+    xTest = wavread([soundDir testFiles{kf}]);
+    [SNR(kf) PSM(kf),PSMt(kf),...
+        PESQ_MOS(kf),EAQUAL_ODG(kf), EAQUAL_DIX(kf)] = ...
+        audioQualityMeasures(xRef,xTest,fs,options);
+end
+
+for kf = 1:Nf
+    fprintf('Quality of %s: SNR = %g dB, PSM=%g, PSMt=%g, PESQ=%g, EAQUAL_ODG=%g, EAQUAL_DIX=%g\n',...
+        testFiles{kf},SNR(kf),PSM(kf),PSMt(kf),PESQ_MOS(kf),EAQUAL_ODG(kf),EAQUAL_DIX(kf));
+end
+
+Q = [SNR,PSM,PSMt,PESQ_MOS,EAQUAL_ODG,EAQUAL_DIX];
+Qs = {'SNR','PSM','PSMt','PESQ MOS','EAQUAL ODG','EAQUAL DIX'};
+
+figure
+for k=1:size(Q,2)
+    subplot(ceil(sqrt(size(Q,2))),ceil(sqrt(size(Q,2))),k)
+    plot(Q(:,k))
+    xlabel('audio files');
+    ylabel(Qs{k})
+end
+return
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/toolboxes/AudioInpaintingToolbox/Utils/makeClippedSignal.m	Thu Jul 21 14:27:47 2011 +0100
@@ -0,0 +1,110 @@
+function [xClipped, IClipped, xClean, clipSizes] = makeClippedSignal(x,clippingLevel,GR)
+% Normalize and clip a signal.
+%
+% Usage:
+%   [xClipped, IClipped, xClean, clipSizes] = makeClippedSignal(x,clippingLevel,GR)
+%
+% Inputs:
+%   - x: input signal (may be multichannel)
+%   - clippingLevel: clipping level, between 0 and 1
+%   - GR (default: false): flag to generate an optional graphical display
+%
+% Outputs:
+%   - xClipped: clipped signal
+%   - IClipped: boolean vector (same size as xClipped) that indexes clipped
+%   samples
+%   - xClean: clean signal
+%   - clipSizes: size of the clipped segments
+%
+% Note that the input signal is normalized to 0.9999 (-1 is not allowed in
+% wav files) to provide xClipped and xClean.
+%
+% -------------------
+%
+% Audio Inpainting toolbox
+% Date: June 28, 2011
+% By Valentin Emiya, Amir Adler, Maria Jafari
+% This code is distributed under the terms of the GNU Public License version 3 (http://www.gnu.org/licenses/gpl.txt).
+
+if nargin<3 || isempty(GR)
+    GR = false;
+end
+
+%% Normalization
+xMax = 0.9999;
+xClean = x/max(abs(x(:)))*xMax;
+clippingLevel = clippingLevel*xMax;
+
+%% DISABLED - Ramp to produce a clipping level that linearly increases
+if 0
+    xClean = xClean.*(1:length(xClean))'/length(xClean);
+end
+
+%% Clipping (hard threshold)
+xClipped = min(max(xClean,-clippingLevel),clippingLevel);
+IClipped = abs(xClipped)>=clippingLevel; % related indices
+
+%% Size of the clipped segments
+if nargout>3 || GR
+   %     clipSizes = diff(find(diff(~IClipped)));
+   %     clipSizes = clipSizes(2-(IClipped(1)==0):2:end);
+   clipSizes = diff(IClipped);
+   if clipSizes(find(clipSizes,1,'first'))==-1,clipSizes = [1;clipSizes]; end
+   if clipSizes(find(clipSizes,1,'last'))==1,clipSizes = [clipSizes;-1]; end
+   clipSizes = diff(find(clipSizes));
+   clipSizes = clipSizes(1:2:end);
+end
+
+%% Optional graphical display
+if GR
+    
+    % Plot histogram of the sizes of the clipped segments
+    if ~isempty(clipSizes)
+        figure
+        hist(clipSizes,1:max(clipSizes))
+        title('Size of missing segments')
+        xlabel('Size'),ylabel('# of segments')
+    end
+    
+    t = (0:length(xClean)-1); % time scale in samples
+    
+    % Plot original and clipped signals
+    figure
+    plot(t,xClean,'',t,xClipped,'')
+    legend('original','clipped')
+    
+    % Scatter plot between original and clipped signals
+    figure
+    plot(xClean,xClipped,'.')
+    xlabel('Original signal'),ylabel('Clipped signal')
+    
+    % Spectrograms
+    N = 512;
+    w = hann(N);
+    fs = 1;
+    NOverlap = round(.8*N);
+    nfft = 2^nextpow2(N)*2*2;
+    figure
+    subplot(3,3,[1,4])
+    spectrogram(xClean,w,NOverlap,nfft,fs,'yaxis')
+    title('Original')
+    xlim(t([1,end]))
+    cl = get(gca,'clim');
+    set(gca,'clim',cl);
+    subplot(3,3,[1,4]+1)
+    spectrogram(xClipped,w,NOverlap,nfft,fs,'yaxis')
+    title('Clipped')
+    set(gca,'clim',cl);
+    subplot(3,3,[1,4]+2)
+    spectrogram(xClean-xClipped,w,NOverlap,nfft,fs,'yaxis')
+    title('Error (=original-clipped)')
+    set(gca,'clim',cl);
+    subplot(3,3,7)
+    plot(t,xClean,'');xlim(t([1,end]))
+    subplot(3,3,8)
+    plot(t,xClean,'',t,xClipped,'');xlim(t([1,end]))
+    subplot(3,3,9)
+    plot(t,xClean-xClipped,'');xlim(t([1,end]))
+end
+
+return
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/toolboxes/AudioInpaintingToolbox/Utils/wRect.m	Thu Jul 21 14:27:47 2011 +0100
@@ -0,0 +1,20 @@
+function w = wRect(L)
+% This code is distributed under the terms of the GNU Public License version 3 (http://www.gnu.org/licenses/gpl.txt).
+% rectangular window with length L
+%
+% Usage:
+%     w = wRect(L)
+%
+% Inputs:
+%          - L - window length
+%
+% Outputs:
+%          - w - window
+%
+% -------------------
+%
+% Audio Inpainting toolbox
+% Date: June 28, 2011
+% By Valentin Emiya, Amir Adler, Maria Jafari
+w = ones(1,L);
+return
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/toolboxes/AudioInpaintingToolbox/Utils/wSine.m	Thu Jul 21 14:27:47 2011 +0100
@@ -0,0 +1,21 @@
+function w = wSine(L)
+% Symetric sine window with length L
+%
+% Usage:
+%     w = wSine(L)
+%
+% Inputs:
+%          - L - Window length
+%
+% Outputs:
+%          - w - window
+%
+% -------------------
+%
+% Audio Inpainting toolbox
+% Date: June 28, 2011
+% By Valentin Emiya, Amir Adler, Maria Jafari
+% This code is distributed under the terms of the GNU Public License version 3 (http://www.gnu.org/licenses/gpl.txt).
+
+w = sin(((0:(L-1))+.5)/L*pi);
+return
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/toolboxes/AudioInpaintingToolbox/license.txt	Thu Jul 21 14:27:47 2011 +0100
@@ -0,0 +1,680 @@
+The code of this toolbox is distributed under the terms of the GNU Public License version 3 (http://www.gnu.org/licenses/gpl.txt).
+The data files are distributed under specific licenses as stated in the related .txt files in the directory 'Data/'.
+
+Authors: Valentin Emiya, INRIA, France; Amir Adler, The Technion, Israel; Maria Jafari, Queen Mary University of London, UK.
+
+                    GNU GENERAL PUBLIC LICENSE
+                       Version 3, 29 June 2007
+
+ Copyright (C) 2007 Free Software Foundation, Inc. <http://fsf.org/>
+ Everyone is permitted to copy and distribute verbatim copies
+ of this license document, but changing it is not allowed.
+
+                            Preamble
+
+  The GNU General Public License is a free, copyleft license for
+software and other kinds of works.
+
+  The licenses for most software and other practical works are designed
+to take away your freedom to share and change the works.  By contrast,
+the GNU General Public License is intended to guarantee your freedom to
+share and change all versions of a program--to make sure it remains free
+software for all its users.  We, the Free Software Foundation, use the
+GNU General Public License for most of our software; it applies also to
+any other work released this way by its authors.  You can apply it to
+your programs, too.
+
+  When we speak of free software, we are referring to freedom, not
+price.  Our General Public Licenses are designed to make sure that you
+have the freedom to distribute copies of free software (and charge for
+them if you wish), that you receive source code or can get it if you
+want it, that you can change the software or use pieces of it in new
+free programs, and that you know you can do these things.
+
+  To protect your rights, we need to prevent others from denying you
+these rights or asking you to surrender the rights.  Therefore, you have
+certain responsibilities if you distribute copies of the software, or if
+you modify it: responsibilities to respect the freedom of others.
+
+  For example, if you distribute copies of such a program, whether
+gratis or for a fee, you must pass on to the recipients the same
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+
+  Developers that use the GNU GPL protect your rights with two steps:
+(1) assert copyright on the software, and (2) offer you this License
+giving you legal permission to copy, distribute and/or modify it.
+
+  For the developers' and authors' protection, the GPL clearly explains
+that there is no warranty for this free software.  For both users' and
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+
+  Some devices are designed to deny users access to install or run
+modified versions of the software inside them, although the manufacturer
+can do so.  This is fundamentally incompatible with the aim of
+protecting users' freedom to change the software.  The systematic
+pattern of such abuse occurs in the area of products for individuals to
+use, which is precisely where it is most unacceptable.  Therefore, we
+have designed this version of the GPL to prohibit the practice for those
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+stand ready to extend this provision to those domains in future versions
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+
+  Finally, every program is threatened constantly by software patents.
+States should not allow patents to restrict development and use of
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+avoid the special danger that patents applied to a free program could
+make it effectively proprietary.  To prevent this, the GPL assures that
+patents cannot be used to render the program non-free.
+
+  The precise terms and conditions for copying, distribution and
+modification follow.
+
+                       TERMS AND CONDITIONS
+
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+
+  "This License" refers to version 3 of the GNU General Public License.
+
+  "Copyright" also means copyright-like laws that apply to other kinds of
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/toolboxes/AudioInpaintingToolbox/readme.txt	Thu Jul 21 14:27:47 2011 +0100
@@ -0,0 +1,70 @@
+
+-------------------------------------------------
+
+Audio Inpainting Toolbox
+
+By
+
+Valentin Emiya, INRIA, France
+Amir Adler, The Technion, Israel
+Maria Jafari, Queen Mary University of London, UK
+
+Contact: valentin.emiya@inria.fr
+-------------------------------------------------
+
+%%%%%%%%%%%%
+Requirements
+%%%%%%%%%%%%
+The code has been developped in Matlab (R2010a).
+The CVX toolbox is required by solvers.
+
+%%%%%%%%%%%%
+Installation
+%%%%%%%%%%%%
+Just unpack the archive and ensure that you have CVX installed.
+
+%%%%%%%%%%%%%%%
+Getting started
+%%%%%%%%%%%%%%%
+Just run the files in the subdirectories of 'Experiments/'.
+As a starting example, the simplest one is declipOneSoundExperiment.m.
+
+%%%%%%%%%%%%%%%%%%%
+Very quick tutorial
+%%%%%%%%%%%%%%%%%%%
+The toolbox is organized into several types of components, each type being located in a separate directory:
+- Problems (API: '[problemData,solutionData] = generateMyProblem(mysound,problemParam);'): generates a particular problem (e.g. "declip this sound"), with given parameters, and generates the true solution.
+- Solvers/algorithms (API: 'solutionEstimate = mySolver(problemData,solverParameters);'): given a problem and the solver parameters (a dictionary, thresholds, and so on), a solver proposes a solution using its particular algorithm
+- Utils: e.g. dictionaries, evaluation functions are stored here
+- Data: audio datasets including speech, music
+- Experiments (API: 'myExperiment(experimentParameters);'): they are the main files one may run. A specific experiment takes a dataset, generates specific problems (e.g. increasing clipping levels), solves each problem with a number of solvers (specified in the experiment parameters), displays the performance for each solver. The experiments can be run without any input argument. In this case, default values will be used.
+
+You may find more information:
+- about each function 'myFunction', by typing 'help myFunction' in Matlab
+- in the documented code of each function
+- in the extended abstract and slides presented at the SPARS'11 workshop
+- in the paper available at http://hal.inria.fr/inria-00577079/en
+
+%%%%%%%%%%%%%%%%%%%%%%%%
+How to cite this toolbox
+%%%%%%%%%%%%%%%%%%%%%%%%
+Please cite the following paper:
+Adler Amir; Emiya Valentin; Jafari Maria; Elad Michael; Gribonval Remi; Plumbley Mark
+Audio Inpainting
+Submitted to IEEE Transactions on Audio, Speech, and Language Processing (2011)
+Available at http://hal.inria.fr/inria-00577079/en.
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%
+Known issues / Future works
+%%%%%%%%%%%%%%%%%%%%%%%%%%%
+- The multithread processing of audio frames is not yet available (you may wonder about the Java TCP/IP utils, which will be used soon for this purpose).
+- Some solvers based on L1 minimization will be added soon.
+- The experiment called 'FromSmallToLargeHoleExperiment' will be added soon.
+
+%%%%%%%
+License
+%%%%%%%
+The code of this toolbox is distributed under the terms of the GNU Public License version 3 (http://www.gnu.org/licenses/gpl.txt).
+The data files are distributed under specific licenses as stated in the related .txt files in the directory 'Data/'.
+
+