Mercurial > hg > sfx-subgrouping
comparison phase2/treeLinkFeatures.m @ 11:29304e7bfead
develop treeLinkFeatures so it searched valid lines and stops at leaf nodes
author | DaveM |
---|---|
date | Fri, 10 Feb 2017 12:18:20 +0000 |
parents | 686d1f9b8698 |
children | d0bd98e7b6c9 |
comparison
equal
deleted
inserted
replaced
10:686d1f9b8698 | 11:29304e7bfead |
---|---|
1 function featureList = treeLinkFeatures(data) | 1 function [linkList, featureList]= treeLinkFeatures(data) |
2 %% linkList = treeLinkFeatures(data) | 2 %% linkList = treeLinkFeatures(data) |
3 % given a dataset, a hierarchical cluster of the data is produced, and then | 3 % given a dataset, a hierarchical cluster of the data is produced, and then |
4 % the data is traversed, such that, for each split in the data, a set of | 4 % the data is traversed, such that, for each split in the data, a set of |
5 % features are produced, which are the ranked features that can be used to | 5 % features are produced, which are the ranked features that can be used to |
6 % separate the given dataset at that point. | 6 % separate the given dataset at that point. |
13 featureList = cell(listSize-1,1); | 13 featureList = cell(listSize-1,1); |
14 currentRow = [2*listSize-1]; | 14 currentRow = [2*listSize-1]; |
15 | 15 |
16 | 16 |
17 while (length(currentRow) > 0) | 17 while (length(currentRow) > 0) |
18 currentRow | 18 if(currentRow(1) >= listSize) |
19 if(currentRow(1) > listSize-1) | 19 row = currentRow(1) - listSize |
20 row = currentRow(1) - listSize; | |
21 classList = traceLinkageToBinary(linkList, row); | 20 classList = traceLinkageToBinary(linkList, row); |
22 featureList{row} = rfFeatureSelection(data(classList>0,:), classList(classList>0)) | 21 featureList{row} = rfFeatureSelection(data(classList>0,:), classList(classList>0)); |
23 currentRow = [currentRow(2:end); linkList(row,1); linkList(row,2)]; | 22 currentRow = [currentRow(2:end); linkList(row,1); linkList(row,2)]; |
24 else | 23 else |
25 currentRow = currentRow(2:end); | 24 currentRow = currentRow(2:end); |
26 end | 25 end |
27 end | 26 end |