annotate armadillo-2.4.4/include/armadillo_bits/glue_cor_meat.hpp @ 18:8d046a9d36aa slimline

Back out rev 13:ac07c60aa798. Like an idiot, I committed a whole pile of unrelated changes in the guise of a single typo fix. Will re-commit in stages
author Chris Cannam
date Thu, 10 May 2012 10:45:44 +0100
parents 8b6102e2a9b0
children
rev   line source
max@0 1 // Copyright (C) 2009-2011 NICTA (www.nicta.com.au)
max@0 2 // Copyright (C) 2009-2011 Conrad Sanderson
max@0 3 // Copyright (C) 2009-2010 Dimitrios Bouzas
max@0 4 //
max@0 5 // This file is part of the Armadillo C++ library.
max@0 6 // It is provided without any warranty of fitness
max@0 7 // for any purpose. You can redistribute this file
max@0 8 // and/or modify it under the terms of the GNU
max@0 9 // Lesser General Public License (LGPL) as published
max@0 10 // by the Free Software Foundation, either version 3
max@0 11 // of the License or (at your option) any later version.
max@0 12 // (see http://www.opensource.org/licenses for more info)
max@0 13
max@0 14
max@0 15 //! \addtogroup glue_cor
max@0 16 //! @{
max@0 17
max@0 18
max@0 19
max@0 20 template<typename eT>
max@0 21 inline
max@0 22 void
max@0 23 glue_cor::direct_cor(Mat<eT>& out, const Mat<eT>& A, const Mat<eT>& B, const uword norm_type)
max@0 24 {
max@0 25 arma_extra_debug_sigprint();
max@0 26
max@0 27 if(A.is_empty() || B.is_empty() )
max@0 28 {
max@0 29 out.reset();
max@0 30 return;
max@0 31 }
max@0 32
max@0 33 if(A.is_vec() && B.is_vec())
max@0 34 {
max@0 35 arma_debug_check( (A.n_elem != B.n_elem), "cor(): the number of elements in the two vectors must match" );
max@0 36
max@0 37 const eT* A_ptr = A.memptr();
max@0 38 const eT* B_ptr = B.memptr();
max@0 39
max@0 40 eT A_acc = eT(0);
max@0 41 eT B_acc = eT(0);
max@0 42 eT out_acc = eT(0);
max@0 43
max@0 44 const uword N = A.n_elem;
max@0 45
max@0 46 for(uword i=0; i<N; ++i)
max@0 47 {
max@0 48 const eT A_tmp = A_ptr[i];
max@0 49 const eT B_tmp = B_ptr[i];
max@0 50
max@0 51 A_acc += A_tmp;
max@0 52 B_acc += B_tmp;
max@0 53
max@0 54 out_acc += A_tmp * B_tmp;
max@0 55 }
max@0 56
max@0 57 out_acc -= (A_acc * B_acc)/eT(N);
max@0 58
max@0 59 const eT norm_val = (norm_type == 0) ? ( (N > 1) ? eT(N-1) : eT(1) ) : eT(N);
max@0 60
max@0 61 out.set_size(1,1);
max@0 62 out[0] = out_acc/norm_val;
max@0 63
max@0 64 const Mat<eT> stddev_A = (A.n_rows == 1) ? Mat<eT>(stddev(trans(A))) : Mat<eT>(stddev(A));
max@0 65 const Mat<eT> stddev_B = (B.n_rows == 1) ? Mat<eT>(stddev(trans(B))) : Mat<eT>(stddev(B));
max@0 66
max@0 67 out /= stddev_A * stddev_B;
max@0 68 }
max@0 69 else
max@0 70 {
max@0 71 arma_debug_assert_same_size(A, B, "cor()");
max@0 72
max@0 73 const uword N = A.n_rows;
max@0 74 const eT norm_val = (norm_type == 0) ? ( (N > 1) ? eT(N-1) : eT(1) ) : eT(N);
max@0 75
max@0 76 out = trans(A) * B;
max@0 77 out -= (trans(sum(A)) * sum(B))/eT(N);
max@0 78 out /= norm_val;
max@0 79 out /= trans(stddev(A)) * stddev(B);
max@0 80 }
max@0 81 }
max@0 82
max@0 83
max@0 84
max@0 85 template<typename T>
max@0 86 inline
max@0 87 void
max@0 88 glue_cor::direct_cor(Mat< std::complex<T> >& out, const Mat< std::complex<T> >& A, const Mat< std::complex<T> >& B, const uword norm_type)
max@0 89 {
max@0 90 arma_extra_debug_sigprint();
max@0 91
max@0 92 typedef typename std::complex<T> eT;
max@0 93
max@0 94 if(A.is_empty() || B.is_empty() )
max@0 95 {
max@0 96 out.reset();
max@0 97 return;
max@0 98 }
max@0 99
max@0 100 if(A.is_vec() && B.is_vec())
max@0 101 {
max@0 102 arma_debug_check( (A.n_elem != B.n_elem), "cor(): the number of elements in the two vectors must match" );
max@0 103
max@0 104 const eT* A_ptr = A.memptr();
max@0 105 const eT* B_ptr = B.memptr();
max@0 106
max@0 107 eT A_acc = eT(0);
max@0 108 eT B_acc = eT(0);
max@0 109 eT out_acc = eT(0);
max@0 110
max@0 111 const uword N = A.n_elem;
max@0 112
max@0 113 for(uword i=0; i<N; ++i)
max@0 114 {
max@0 115 const eT A_tmp = A_ptr[i];
max@0 116 const eT B_tmp = B_ptr[i];
max@0 117
max@0 118 A_acc += A_tmp;
max@0 119 B_acc += B_tmp;
max@0 120
max@0 121 out_acc += std::conj(A_tmp) * B_tmp;
max@0 122 }
max@0 123
max@0 124 out_acc -= (std::conj(A_acc) * B_acc)/eT(N);
max@0 125
max@0 126 const eT norm_val = (norm_type == 0) ? ( (N > 1) ? eT(N-1) : eT(1) ) : eT(N);
max@0 127
max@0 128 out.set_size(1,1);
max@0 129 out[0] = out_acc/norm_val;
max@0 130
max@0 131 const Mat<T> stddev_A = (A.n_rows == 1) ? Mat<T>(stddev(trans(A))) : Mat<T>(stddev(A));
max@0 132 const Mat<T> stddev_B = (B.n_rows == 1) ? Mat<T>(stddev(trans(B))) : Mat<T>(stddev(B));
max@0 133
max@0 134 out /= conv_to< Mat<eT> >::from( stddev_A * stddev_B );
max@0 135 }
max@0 136 else
max@0 137 {
max@0 138 arma_debug_assert_same_size(A, B, "cor()");
max@0 139
max@0 140 const uword N = A.n_rows;
max@0 141 const eT norm_val = (norm_type == 0) ? ( (N > 1) ? eT(N-1) : eT(1) ) : eT(N);
max@0 142
max@0 143 out = trans(A) * B; // out = strans(conj(A)) * B;
max@0 144 out -= (trans(sum(A)) * sum(B))/eT(N); // out -= (strans(conj(sum(A))) * sum(B))/eT(N);
max@0 145 out /= norm_val;
max@0 146 out /= conv_to< Mat<eT> >::from( trans(stddev(A)) * stddev(B) );
max@0 147 }
max@0 148 }
max@0 149
max@0 150
max@0 151
max@0 152 template<typename T1, typename T2>
max@0 153 inline
max@0 154 void
max@0 155 glue_cor::apply(Mat<typename T1::elem_type>& out, const Glue<T1,T2,glue_cor>& X)
max@0 156 {
max@0 157 arma_extra_debug_sigprint();
max@0 158
max@0 159 typedef typename T1::elem_type eT;
max@0 160
max@0 161 const unwrap_check<T1> A_tmp(X.A, out);
max@0 162 const unwrap_check<T2> B_tmp(X.B, out);
max@0 163
max@0 164 const Mat<eT>& A = A_tmp.M;
max@0 165 const Mat<eT>& B = B_tmp.M;
max@0 166
max@0 167 const uword norm_type = X.aux_uword;
max@0 168
max@0 169 if(&A != &B)
max@0 170 {
max@0 171 glue_cor::direct_cor(out, A, B, norm_type);
max@0 172 }
max@0 173 else
max@0 174 {
max@0 175 op_cor::direct_cor(out, A, norm_type);
max@0 176 }
max@0 177 }
max@0 178
max@0 179
max@0 180
max@0 181 //! @}