Mercurial > hg > segmentation

comparison novelty.py @ 18:b4bf37f94e92

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prepared to add another annotation
author mitian
date Wed, 09 Dec 2015 16:27:10 +0000
parents c01fcb752221
children
comparison
equal deleted inserted replaced
17:c01fcb752221 18:b4bf37f94e92
27 peak_picker.params.postWin = 5 + 1 27 peak_picker.params.postWin = 5 + 1
28 peak_picker.params.LP_on = True 28 peak_picker.params.LP_on = True
29 peak_picker.params.Medfilt_on = True 29 peak_picker.params.Medfilt_on = True
30 peak_picker.params.Polyfit_on = True 30 peak_picker.params.Polyfit_on = True
31 peak_picker.params.isMedianPositive = False 31 peak_picker.params.isMedianPositive = False
32 32 peak_picker.params.gt = None
33
33 def getNoveltyCurve(ssm, kernel_size, normalise=False): 34 def getNoveltyCurve(ssm, kernel_size, normalise=False):
34 '''Return novelty score from ssm.''' 35 '''Return novelty score from ssm.'''
35 36
36 kernel_size = int(np.floor(kernel_size/2.0) + 1) 37 kernel_size = int(np.floor(kernel_size/2.0) + 1)
37 stripe = getDiagonalSlice(ssm, kernel_size) 38 stripe = getDiagonalSlice(ssm, kernel_size)