Mercurial > hg > plosone_underreview

changeset 29:6aa08c9c95e9 branch-tests

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merged
author Maria Panteli <m.x.panteli@gmail.com>
date Wed, 13 Sep 2017 17:35:06 +0100
parents bd284065aeb6 (diff) 29b5ee381305 (current diff)
children e8084526f7e5
files notebooks/test_hubness.ipynb
diffstat 1 files changed, 22 insertions(+), 15 deletions(-) [+]
line wrap: on
line diff
--- a/notebooks/test_hubness.ipynb	Wed Sep 13 17:33:48 2017 +0100
+++ b/notebooks/test_hubness.ipynb	Wed Sep 13 17:35:06 2017 +0100
@@ -2,7 +2,7 @@
  "cells": [
   {
    "cell_type": "code",
-   "execution_count": 1,
+   "execution_count": 2,
    "metadata": {
     "collapsed": true
    },
@@ -27,23 +27,17 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 2,
-   "metadata": {},
+   "execution_count": 3,
+   "metadata": {
+    "collapsed": false
+   },
    "outputs": [
     {
-     "name": "stderr",
-     "output_type": "stream",
-     "text": [
-      "/homes/mp305/anaconda/lib/python2.7/site-packages/pysal/weights/weights.py:189: UserWarning: There are 21 disconnected observations\n",
-      "  warnings.warn(\"There are %d disconnected observations\" % ni)\n",
-      "/homes/mp305/anaconda/lib/python2.7/site-packages/pysal/weights/weights.py:190: UserWarning: Island ids: 3, 6, 26, 35, 39, 45, 52, 61, 62, 66, 77, 85, 94, 97, 98, 102, 103, 107, 110, 120, 121\n",
-      "  warnings.warn(\"Island ids: %s\" % ', '.join(str(island) for island in self.islands))\n"
-     ]
-    },
-    {
      "name": "stdout",
      "output_type": "stream",
      "text": [
+      "WARNING: there are 21 disconnected observations\n",
+      "Island ids:  [3, 6, 26, 35, 39, 45, 52, 61, 62, 66, 77, 85, 94, 97, 98, 102, 103, 107, 110, 120, 121]\n",
       "Antigua and Barbuda\n",
       "Australia\n",
       "Cuba\n",
@@ -83,7 +77,9 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "metadata": {},
+   "metadata": {
+    "collapsed": false
+   },
    "outputs": [
     {
      "data": {
@@ -114,6 +110,8 @@
   {
    "cell_type": "code",
    "execution_count": null,
+    "collapsed": false
+   },
    "metadata": {},
    "outputs": [],
    "source": [
@@ -123,6 +121,8 @@
   {
    "cell_type": "code",
    "execution_count": null,
+    "collapsed": false
+   },
    "metadata": {},
    "outputs": [],
    "source": [
@@ -149,6 +149,11 @@
   {
    "cell_type": "code",
    "execution_count": null,
+   "outputs": [
+      "\u001b[0;31m---------------------------------------------------------------------------\u001b[0m",
+      "\u001b[0;31mNameError\u001b[0m                                 Traceback (most recent call last)",
+      "\u001b[0;32m<ipython-input-1-0aacb5dec8fd>\u001b[0m in \u001b[0;36m<module>\u001b[0;34m()\u001b[0m\n\u001b[0;32m----> 1\u001b[0;31m \u001b[0mN_k\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mn_occurrence_from_D\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mD\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mk\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0;36m100\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m      2\u001b[0m \u001b[0;32mprint\u001b[0m \u001b[0mskew\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mN_k\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m      3\u001b[0m \u001b[0mplt\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mfigure\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m      4\u001b[0m \u001b[0mplt\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mhist\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mN_k\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mbins\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0;36m100\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m;\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m      5\u001b[0m \u001b[0mplt\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mfigure\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
+      "\u001b[0;31mNameError\u001b[0m: name 'n_occurrence_from_D' is not defined"
    "metadata": {},
    "outputs": [],
    "source": [
@@ -176,7 +181,9 @@
   {
    "cell_type": "code",
    "execution_count": 12,
-   "metadata": {},
+   "metadata": {
+    "collapsed": false
+   },
    "outputs": [
     {
      "data": {