diff toolboxes/FullBNT-1.0.7/HMM/dhmm_logprob.m @ 0:cc4b1211e677 tip

initial commit to HG from
Changeset:
646 (e263d8a21543) added further path and more save "camirversion.m"

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/toolboxes/FullBNT-1.0.7/HMM/dhmm_logprob.m	Fri Aug 19 13:07:06 2016 +0200
@@ -0,0 +1,22 @@
+function [loglik, errors] = dhmm_logprob(data, prior, transmat, obsmat)
+% LOG_LIK_DHMM Compute the log-likelihood of a dataset using a discrete HMM
+% [loglik, errors] = log_lik_dhmm(data, prior, transmat, obsmat)
+%
+% data{m} or data(m,:) is the m'th sequence
+% errors  is a list of the cases which received a loglik of -infinity
+
+if ~iscell(data)
+  data = num2cell(data, 2);
+end
+ncases = length(data);
+
+loglik = 0;
+errors = [];
+for m=1:ncases
+  obslik = multinomial_prob(data{m}, obsmat);
+  [alpha, beta, gamma, ll] = fwdback(prior, transmat, obslik, 'fwd_only', 1);
+  if ll==-inf
+    errors = [errors m];
+  end
+  loglik = loglik + ll;
+end