annotate toolboxes/FullBNT-1.0.7/bnt/examples/static/discrete1.m @ 0:cc4b1211e677 tip

initial commit to HG from
Changeset:
646 (e263d8a21543) added further path and more save "camirversion.m"

% Compare various inference engines on the following network (from Jensen (1996) p84 fig 4.17)
%    1
%  / | \
% 2  3  4
% |  |  |
% 5  6  7
%  \/ \/
%  8   9
% where all arcs point downwards

N = 9;
dag = zeros(N,N);
dag(1,2)=1; dag(1,3)=1; dag(1,4)=1;
dag(2,5)=1; dag(3,6)=1; dag(4,7)=1;
dag(5,8)=1; dag(6,8)=1; dag(6,9)=1; dag(7,9) = 1;

dnodes = 1:N;
false = 1; true = 2;
ns = 2*ones(1,N); % binary nodes

onodes = [2 7];
bnet = mk_bnet(dag, ns, 'observed', onodes);
% use random params
for i=1:N
  bnet.CPD{i} = tabular_CPD(bnet, i);
end

query = [3];
engine = {};
engine{end+1} = jtree_inf_engine(bnet);
engine{end+1} = var_elim_inf_engine(bnet);
%engine{end+1} = global_joint_inf_engine(bnet);
% global joint is designed for limids because does not normalize

%engine{end+1} = enumerative_inf_engine(bnet);
%engine{end+1} = jtree_onepass_inf_engine(bnet, query, onodes);

maximize = 0;  % jtree_ndx crashes on max-prop
[err, time] = cmp_inference_static(bnet, engine, 'maximize', maximize);