diff toolboxes/FullBNT-1.0.7/bnt/CPDs/@noisyor_CPD/CPD_to_CPT.m @ 0:e9a9cd732c1e tip

first hg version after svn

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/toolboxes/FullBNT-1.0.7/bnt/CPDs/@noisyor_CPD/CPD_to_CPT.m	Tue Feb 10 15:05:51 2015 +0000
@@ -0,0 +1,34 @@
+function CPT = CPD_to_CPT(CPD)
+% CPD_TO_CPT Convert the discrete CPD to tabular form (noisyor)
+% CPT = CPD_to_CPT(CPD)
+%
+% CPT(U1,...,Un, X) = Pr(X|U1,...,Un) where the Us are the parents (excluding leak).
+
+if ~isempty(CPD.CPT)
+  CPT = CPD.CPT; % remember to flush cache if params change (e.g., during learning)
+  return;
+end
+
+q = [CPD.leak_inhibit CPD.inhibit(:)'];
+% q(i) is the prob. that the i'th parent will be inhibited (flipped from 1 to 0).
+% q(1) is the leak inhibition probability, and length(q) = n + 1.
+
+if length(q)==1
+  CPT = [q  1-q];
+  return;
+end
+
+n = length(q);
+Bn = ind2subv(2*ones(1,n), 1:(2^n))-1;  % all n bit vectors, with the left most column toggling fastest (LSB)
+CPT = zeros(2^n, 2);
+% Pr(X=0 | U_1 .. U_n) = prod_{i: U_i = on} q_i =  prod_i q_i ^ U_i = exp(u' * log(q_i))
+% This method is problematic when q contains zeros
+
+Q = repmat(q(:)', 2^n, 1);
+Q(logical(~Bn)) = 1;
+CPT(:,1) = prod(Q,2);
+CPT(:,2) = 1-CPT(:,1);
+
+CPT = reshape(CPT(2:2:end), 2*ones(1,n)); % skip cases in which the leak is off       
+
+CPD.CPT = CPT;