Mercurial > hg > camir-aes2014
diff toolboxes/FullBNT-1.0.7/docs/bnsoftOld.html @ 0:e9a9cd732c1e tip
first hg version after svn
author | wolffd |
---|---|
date | Tue, 10 Feb 2015 15:05:51 +0000 |
parents | |
children |
line wrap: on
line diff
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/toolboxes/FullBNT-1.0.7/docs/bnsoftOld.html Tue Feb 10 15:05:51 2015 +0000 @@ -0,0 +1,1078 @@ +<head> +<TITLE>Software Packages for Graphical Models / Bayesian Networks</TITLE> +</head> + +<body> + +<h1> +Software Packages for Graphical Models / Bayesian Networks +</h1> +<p> +Written by Kevin Murphy. +<br> +Last updated 31 October 2005. + +<h3>Remarks</h3> +<ul> + +<li> +A much more detailed comparison of some of these software packages is +available from Appendix B of +<a href="http://www.csse.monash.edu.au/bai/">Bayesian AI</a>, by +Ann Nicholson and Kevin Korb. +This appendix is +available +<a +href="http://www.csse.monash.edu.au/bai/book/appendix_b.pdf">here</a>, +and is based on the online comparison below. + +<li> +An online <a +href="http://servasi.insa-rouen.fr/enseignement/siteUV/rna/BNT/software.html">French +version</a> of this page is also available (not necessarily up-to-date). + +<!-- +<li> +Matt Turk has made a +<a href="http://ilab.cs.ucsb.edu/BayesNets/Bayesia_Software.pdf">pdf +version of this page</a> (not necessarily up-to-date) with some extra +comments on the packages. +--> +<!-- +<br> +(He also has a +<a href="http://ilab.cs.ucsb.edu/BayesNets">cached copy</a> of several of +the packages listed below, which you can look at if links are down.) +--> + +</ul> + +<h3>What do the headers in the table mean?</h3> + +<ul> +<li> Src = source code included? (N=no) If so, what language? + +<li> API = application program interface included? +(N means the program cannot be integrated into your code, i.e., it +must be run as a standalone executable.) + +<li> Exec = Executable runs on W = Windows (95/98/NT), U = Unix, M = +Mac, or - = any machine with a compiler. + +<li> Cts = are continuous (latent) nodes supported? +G = (conditionally) Gaussians nodes supported analytically, +Cs = continuous nodes supported by sampling, +Cd = continuous nodes supported by discretization, +Cx = continuous nodes supported by some unspecified method, +D = only discrete nodes supported. + + +<li> GUI = Graphical User Interface included? + +<li> Learns parameters? + +<li> Learns structure? CI = means uses conditional independency tests + +<!-- +<li> Sample = sampling methods (e.g., likelihood weighting, MCMC) supported? +--> + +<li> Utility = utility and decision nodes (i.e., influence diagrams) +supported? + +<li> Free? +0 = free (although possibly only for academic use). +$ = commercial software (although most have free versions +which are restricted in +various ways, e.g., the model size is limited, or models cannot be +saved, or there is no API.) + + +<li> Undir? +What kind of graphs are supported? +U = only undirected graphs, +D = only directed graphs, +UD = both undirected and directed, +CG = chain graphs (mixed directed/undirected). + + +<li> Inference = which inference algorithm is used? +jtree = junction tree, +varelim = variable (bucket) elimination, +MH = Metropols Hastings, +G = Gibbs sampling, +IS = importance sampling, +sampling = some other Monte Carlo method, +polytree = Pearl's algorithm restricted to a graph with no cycles, +none = no inference supported (hence the program is only designed for +structure learning from completely observed data) + +<li> Comments. +If in "quotes", I am quoting the authors at their request. + +</ul> + + + +<!-- +The following table is automatically generated as follows +bnsoft_to_html.pl < bnsoft.txt > ! soft.html +Then soft.html is inserted and the last line is tidied up. +--> + +<table border> +<tr> +<td> Name +<td> Authors +<td> Src +<td> API +<td> Exec +<td> Cts +<td> GUI +<td> Params +<td> Struct +<td> Utility +<td> Free +<td> Undir +<td> Inference +<td> Comments + + +<tr> +<td> <!--Name--> <a href=http://www.agenarisk.com > AgenaRisk</a> +<td> <!--Authors-->Agena +<td> <!--Src-->N +<td> <!--API-->Y +<td> <!--Exec-->W,U +<td> <!--Cts-->Cx +<td> <!--GUI-->Y +<td> <!--Params-->Y +<td> <!--Struct-->N +<td> <!--Utility-->N +<td> <!--Free-->$ +<td> <!--Undir-->D +<td> <!--Inference-->JTree +<td> <!--Comments-->Simulation by Dynamic discretisation + +<tr> +<td> <!--Name--> <a href=http://www.lumina.com > Analytica</a> +<td> <!--Authors-->Lumina +<td> <!--Src-->N +<td> <!--API-->Y +<td> <!--Exec-->W,M +<td> <!--Cts-->G +<td> <!--GUI-->Y +<td> <!--Params-->N +<td> <!--Struct-->N +<td> <!--Utility-->Y +<td> <!--Free-->$ +<td> <!--Undir-->D +<td> <!--Inference-->sampling +<td> <!--Comments-->spread sheet compatible + +<tr> +<td> <!--Name--> <a href=http://www.cs.duke.edu/~amink/software/banjo/> Banjo</a> +<td> <!--Authors-->Hartemink +<td> <!--Src-->Java +<td> <!--API-->Y +<td> <!--Exec-->W,U,M +<td> <!--Cts-->Cd +<td> <!--GUI-->N +<td> <!--Params-->N +<td> <!--Struct-->Y +<td> <!--Utility-->N +<td> <!--Free-->0 +<td> <!--Undir-->D +<td> <!--Inference-->none +<td> <!--Comments--> structure learning of +static or dynamic networks of discrete variables + + +<tr> +<td><a href=http://www.cs.Helsinki.FI/research/fdk/bassist/> Bassist</a> +<td> U. Helsinki +<td> C++ +<td> Y +<td> U +<td> G +<td> N +<td> Y +<td> N +<td> N +<td> 0 +<td> D +<td> MH +<td> Generates C++ for MCMC. + +<tr> +<td><a href=http://www.cs.Helsinki.FI/research/cosco/Projects/NONE/SW/ > Bayda</a> +<td> U. Helsinki +<td> Java +<td> Y +<td> WUM +<td> G +<td> Y +<td> Y +<td> N +<td> N +<td> 0 +<td> D +<td> ? +<td> Bayesian Naive Bayes classifier. + +<tr> +<td><a href=http://www.mbfys.kun.nl/snn/Research/bayesbuilder/ > BayesBuilder</a> +<td> Nijman (U. Nijmegen) +<td> N +<td> N +<td> W +<td> D +<td> Y +<td> N +<td> N +<td> N +<td> 0 +<td> D +<td> ? +<td> - + +<tr> +<td> <!--Name--> <a +href="http://www.bayesia.com">BayesiaLab</a> +<td> <!--Authors-->Bayesia Ltd +<td> <!--Src-->N +<td> <!--API-->N +<td> <!--Exec-->- +<td> <!--Cts-->Cd +<td> <!--GUI-->Y +<td> <!--Params-->Y +<td> <!--Struct-->Y +<td> <!--Utility-->N +<td> <!--Free-->$ +<td> <!--Undir-->CG +<td> <!--Inference-->jtree,G +<td> <!--Comments--> +<!-- +Structural learning (association discovery, +classification), Bayesian clustering with analysis report generation, +missing values +processing, essential graphs, analysis toolbox, adaptive +questionnaires, dynamic models +--> +Structural learning, adaptive +questionnaires, dynamic models + + + + +<tr> + +<td><a href=http://www.bayesware.com>Bayesware Discoverer</a> +<td> Bayesware +<td> N +<td> N +<td> WUM +<td> Cd +<td> Y +<td> Y +<td> Y +<td> N +<td> $ +<td> D +<td> ? +<td> Uses bound and collapse for learning with missing data. + +<tr> +<td><a href=http://B-Course.hiit.fi/> B-course</a> +<td> U. Helsinki +<td> N +<td> N +<td> WUM +<td> Cd +<td> Y +<td> Y +<td> Y +<td> N +<td> 0 +<td> D +<td> ? +<td> Runs on their server: view results using a web browser. + +<!-- +<tr> +<td><a href="http://www.aist.go.jp/ETL/etl/suri/motomura/BN/bn-java.html">Bayonnet</a> +<td> Motomura (ETL) +<td> Java +<td> Y +<td> WUM +<td> NN +<td> Cx +<td> Y +<td> N +<td> N +<td> 0 +<td> D +<td> ? +<td> For learning, represents BN as a neural net. +--> + +<tr> +<td><a href=http://www.cs.ualberta.ca/~jcheng/bnpc.htm > Belief net power constructor</a> +<td> Cheng (U.Alberta) +<td> N +<td> W +<td> W +<td> D +<td> Y +<td> Y +<td> CI +<td> N +<td> 0 +<td> D +<td> ? +<td> - + +<tr> +<td><a href=http://www.cs.berkeley.edu/~murphyk/Bayes/bnt.html > BNT</a> +<td> Murphy (U.C.Berkeley) +<td> Matlab/C +<td> Y +<td> WUM +<td> G +<td> N +<td> Y +<td> Y +<td> Y +<td> 0 +<td> D,U +<td> Many +<td> Also handles dynamic models, like HMMs and Kalman filters. + + +<tr> +<td> <!--Name--> <a href="http://bndev.sourceforge.net/">BNJ</a> +<td> <!--Authors-->Hsu (Kansas) +<td> <!--Src-->Java +<td> <!--API-->- +<td> <!--Exec-->- +<td> <!--Cts-->D +<td> <!--GUI-->Y +<td> <!--Params-->N +<td> <!--Struct-->Y +<td> <!--Utility-->N +<td> <!--Free-->0 +<td> <!--Undir-->D +<td> <!--Inference-->jtree, IS +<td> <!--Comments-->- + +<!-- +<tr> +<td><a href=http://94.parkview-court.net/project/ > BN Toolkit</a> +<td> Gowans (Imperial) +<td> Visual Basic +<td> Y +<td> W +<td> D +<td> Y +<td> N +<td> Y +<td> N +<td> 0 +<td> D +<td> Polytree +<td> Parser and GUI for the XML-BIF format. +--> + +<tr> +<td><a href=http://www.ics.uci.edu/~irinar > BucketElim</a> +<td> Rish (U.C.Irvine) +<td> C++ +<td> Y +<td> WU +<td> D +<td> N +<td> N +<td> N +<td> N +<td> 0 +<td> D +<td> Varelim +<td> - + +<tr> +<td><a href=http://www.mrc-bsu.cam.ac.uk/bugs > BUGS</a> +<td> MRC/Imperial College +<td> N +<td> N +<td> WU +<td> Cs +<td> W +<td> Y +<td> N +<td> N +<td> 0 +<td> D +<td> Gibbs +<td> - + +<tr> +<td><a href=http://www.data-digest.com > Business Navigator 5</a> +<td> Data Digest Corp +<td> N +<td> N +<td> W +<td> Cd +<td> Y +<td> Y +<td> Y +<td> N +<td> $ +<td> D +<td> Jtree +<td> - + +<tr> +<td><a href=http://www-pcd.stanford.edu/cousins/caben-1.1.tar.gz > CABeN</a> +<td> Cousins et al. (Wash. U.) +<td> C +<td> Y +<td> WU +<td> D +<td> N +<td> N +<td> N +<td> N +<td> 0 +<td> D +<td> 5 Sampling methods +<td> - + +<tr> +<td> <!--Name--> <a href= +http://discover1.mc.vanderbilt.edu/discover/public/>Causal discoverer</a> +<td> <!--Authors-->Vanderbilt +<td> <!--Src-->N +<td> <!--API-->N +<td> <!--Exec-->W +<td> <!--Cts-->- +<td> <!--GUI-->- +<td> <!--Params-->N +<td> <!--Struct-->Y +<td> <!--Utility-->N +<td> <!--Free-->0 +<td> <!--Undir-->D +<td> <!--Inference-->- +<td> <!--Comments-->structure learning only + + +<tr> +<td><a href=http://www.math.auc.dk/~jhb/CoCo/information.html > CoCo+Xlisp</a> +<td> Badsberg (U. Aalborg) +<td> C/lisp +<td> Y +<td> U +<td> D +<td> Y +<td> Y +<td> CI +<td> N +<td> 0 +<td> U +<td> Jtree +<td> Designed for contingency tables. + +<tr> +<td><a href=http://www.cs.ubc.ca/labs/lci/CIspace/ > CIspace</a> +<td> Poole et al. (UBC) +<td> Java +<td> N +<td> WU +<td> D +<td> Y +<td> N +<td> N +<td> N +<td> 0 +<td> D +<td> Varelim +<td> - + +<tr> +<td> <!--Name--> <a href="http://www.robots.ox.ac.uk/~parg/software.html">DBNbox</a> +<td> <!--Authors-->Roberts et al +<td> <!--Src-->Matlab +<td> <!--API-->- +<td> <!--Exec-->- +<td> <!--Cts-->Y +<td> <!--GUI-->N +<td> <!--Params-->Y +<td> <!--Struct-->N +<td> <!--Utility-->N + +<td> <!--Free-->Y +<td> <!--Undir-->D +<td> <!--Inference-->Various +<td> <!--Comments-->DBNs + +<tr> +<td> <!--Name--><a href=http://www.math.auc.dk/novo/deal>Deal</a> +<td> <!--Authors-->Bottcher et al +<td> <!--Src-->R +<td> <!--API-->- +<td> <!--Exec-->- +<td> <!--Cts-->G +<td> <!--GUI-->Y +<td> <!--Params-->Y +<td> <!--Struct-->Y +<td> <!--Utility-->N +<td> <!--Free-->0 +<td> <!--Undir-->D +<td> <!--Inference-->None +<td> <!--Comments--> +Structure learning. + +<tr> +<td><a href=http://www.deriveit.com >DeriveIt</a> +<td> <!--Authors-->DeriveIt LLC +<td> <!--Src-->N +<td> <!--API-->- +<td> <!--Exec-->- +<td> <!--Cts-->? +<td> <!--GUI-->? +<td> <!--Params-->Y +<td> <!--Struct-->Y +<td> <!--Utility-->? +<td> <!--Free-->$ +<td> <!--Undir-->D +<td> <!--Inference-->Jtree +<td> <!--Comments--> +Exploits local structure in CPDs. + + +<tr> +<td><a href=http://www.noeticsystems.com>Ergo</> +<td> <!--Authors-->Noetic systems +<td> <!--Src-->N +<td> <!--API-->Y +<td> <!--Exec-->W,M +<td> <!--Cts-->D +<td> <!--GUI-->Y +<td> <!--Params-->N +<td> <!--Struct-->N +<td> <!--Utility-->N +<td> <!--Free-->$ +<td> <!--Undir-->D +<td> <!--Inference-->jtree +<td> <!--Comments-->- + +<!-- +<tr> +<td><a href=http://www.ens-lyon.fr/~jnarboux/Floue/index.html>FLoUE/BIFtoN</a> +<td> ENS Lyon +<td> Java +<td> Y +<td> WUM +<td> D +<td> N +<td> N +<td> N +<td> N +<td> 0 +<td> D +<td> Jtree +<td> - +--> + +<tr> +<td><a href=http://www.staff.ncl.ac.uk/d.j.wilkinson/software/gdagsim/ > GDAGsim</a> +<td> Wilkinson (U. Newcastle) +<td> C +<td> Y +<td> WUM +<td> G +<td> N +<td> N +<td> N +<td> N +<td> 0 +<td> D +<td> Exact +<td> Bayesian analysis of large linear Gaussian directed models. + + +<tr> +<td><a href=http://www2.sis.pitt.edu/~genie > Genie</a> +<td> U. Pittsburgh +<td> N +<td> WU +<td> WU +<td> D +<td> W +<td> N +<td> N +<td> Y +<td> 0 +<td> D +<td> Jtree +<td> - + +<tr> +<td><a href=http://www.math.ntnu.no/~hrue/GMRFsim/ > GMRFsim</a> +<td> Rue (U. Trondheim) +<td> C +<td> Y +<td> WUM +<td> G +<td> N +<td> N +<td> N +<td> N +<td> 0 +<td> U +<td> MCMC +<td> Bayesian analysis of large linear Gaussian undirected models. + + +<tr> +<td> <!--Name--> <a href=http://ssli.ee.washington.edu/~bilmes/gmtk/>GMTk</a> +<td> <!--Authors-->Bilmes (UW), Zweig (IBM) +<td> <!--Src-->N +<td> <!--API-->Y +<td> <!--Exec-->U +<td> <!--Cts-->D +<td> <!--GUI-->N +<td> <!--Params-->Y +<td> <!--Struct-->Y +<td> <!--Utility-->N +<td> <!--Free-->0 +<td> <!--Undir-->D +<td> <!--Inference-->Jtree +<td> <!--Comments--> +Designed for speech recognition. + +<tr> +<td> <!--Name--> <a href=http://www.r-project.org/gR>gR</a> +<td> <!--Authors-->Lauritzen et al. +<td> <!--Src-->R +<td> <!--API-->- +<td> <!--Exec-->- +<td> <!--Cts-->- +<td> <!--GUI-->- +<td> <!--Params-->- +<td> <!--Struct-->- +<td> <!--Utility-->- +<td> <!--Free-->0 +<td> <!--Undir-->- +<td> <!--Inference-->- +<td> <!--Comments-->Currently vaporware + + +<tr> +<td> <!--Name--> <a href=http://www.stats.bris.ac.uk/~peter/Grappa/>Grappa</a> +<td> <!--Authors-->Green (Bristol) +<td> <!--Src-->R +<td> <!--API-->- +<td> <!--Exec-->- +<td> <!--Cts-->D +<td> <!--GUI-->N +<td> <!--Params-->N) +<td> <!--Struct-->N +<td> <!--Utility-->N +<td> <!--Free-->0 +<td> <!--Undir-->D +<td> <!--Inference-->Jtree +<td> <!--Comments-->- + + +<tr> +<td><a href=http://www.hugin.com > Hugin Expert</a> +<td> Hugin +<td> N +<td> Y +<td> W +<td> G +<td> W +<td> Y +<td> CI +<td> Y +<td> $ +<td> CG +<td> Jtree +<td> - + + +<tr> +<td> <!--Name--> <a href=http://www.warnes.net/GregsSoftwareLinks/index_html?Tab=MCMC>Hydra</a> +<td> <!--Authors-->Warnes (U.Wash.) +<td> <!--Src-->Java +<td> <!--API-->- +<td> <!--Exec-->- +<td> <!--Cts-->Cs +<td> <!--GUI-->Y +<td> <!--Params-->Y +<td> <!--Struct-->N +<td> <!--Utility-->N +<td> <!--Free-->0 +<td> <!--Undir-->U,D +<td> <!--Inference-->MCMC +<td> <!--Comments-->- + + +<tr> +<!-- http://www.rpal.rockwell.com/ideal.html --> +<td><a href=http://yoda.cis.temple.edu:8080/ideal>Ideal</a> +<td> Rockwell +<td> Lisp +<td> Y +<td> WUM +<td> D +<td> Y +<td> N +<td> N +<td> Y +<td> 0 +<td> D +<td> Jtree +<td> GUI requires Allegro Lisp. + +<tr> +<td><a href=http://www.cs.cmu.edu/~javabayes/Home/ > Java Bayes</a> +<td> Cozman (CMU) +<td> Java +<td> Y +<td> WUM +<td> D +<td> Y +<td> N +<td> N +<td> Y +<td> 0 +<td> D +<td> Varelim, jtree +<td> - + + +<tr> +<td> <!--Name--><a href="http://www.codeas.com/kbaseai.php" >KBaseAI</a> +<td> <!--Authors-->Codeas +<td> <!--Src-->N +<td> <!--API-->Y +<td> <!--Exec-->W,U +<td> <!--Cts-->D +<td> <!--GUI-->N +<td> <!--Params-->N +<td> <!--Struct-->N +<td> <!--Utility-->N +<td> <!--Free-->$ +<td> <!--Undir-->D +<td> <!--Inference-->varelim +<td> <!--Comments-->client/server architecture, multiple users, access +control, query language + + +<tr> +<td> <!--Name--> <a href=http://www.cs.huji.ac.il/labs/compbio/LibB>LibB</a> +<td> <!--Authors-->Friedman (Hebrew U) +<td> <!--Src-->N +<td> <!--API-->Y +<td> <!--Exec-->W +<td> <!--Cts-->D +<td> <!--GUI-->N +<td> <!--Params-->Y +<td> <!--Struct-->Y +<td> <!--Utility-->N +<td> <!--Free-->0 +<td> <!--Undir-->D +<td> <!--Inference-->none +<td> <!--Comments--> +Structure learning + +<tr> +<td><a href=http://www.hypergraph.dk/ > MIM</a> +<td> HyperGraph Software +<td> N +<td> N +<td> W +<td> G +<td> Y +<td> Y +<td> Y +<td> N +<td> $ +<td> CG +<td> Jtree +<td> Up to 52 variables. + +<tr> +<td><a href=http://research.microsoft.com/adapt/MSBNx/ > MSBNx</a> +<td> Microsoft +<td> N +<td> Y +<td> W +<td> D +<td> W +<td> N +<td> N +<td> Y +<td> 0 +<td> D +<td> Jtree +<td> - + +<tr> +<td><a href=http://www.norsys.com > Netica</a> +<td> Norsys +<td> N +<td> WUM +<td> W +<td> G +<td> W +<td> Y +<td> N +<td> Y +<td> $ +<td> D +<td> jtree +<td> - + +<tr> +<td> <!--Name--> <a href="http://www.autonlab.org/autonweb/showSoftware/149/">Optimal +Reinsertion</a> +<td> <!--Authors-->Moore, Wong (CMU) +<td> <!--Src-->N +<td> <!--API-->N +<td> <!--Exec-->W,U +<td> <!--Cts-->D +<td> <!--GUI-->N +<td> <!--Params-->Y +<td> <!--Struct-->Y +<td> <!--Utility-->N +<td> <!--Free-->0 +<td> <!--Undir-->D +<td> <!--Inference-->none +<td> <!--Comments-->structure learning + + +<tr> +<td> <!--Name--> <a href="http://people.bu.edu/vladimir/pmt/index.html">PMT</a> +<td> <!--Authors-->Pavlovic (BU) +<td> <!--Src-->Matlab/C +<td> <!--API-->- +<td> <!--Exec-->- +<td> <!--Cts-->D +<td> <!--GUI-->N +<td> <!--Params-->Y +<td> <!--Struct-->N +<td> <!--Utility-->N +<td> <!--Free-->0 +<td> <!--Undir-->D +<td> <!--Inference-->special purpose +<td> <!--Comments-->- + + + +<tr> +<td> <!--Name--> <a href=http://www.intel.com/research/mrl/pnl/>PNL</a> +<td> <!--Authors-->Eruhimov (Intel) +<td> <!--Src-->C++ +<td> <!--API-->- +<td> <!--Exec-->- +<td> <!--Cts-->D +<td> <!--GUI-->N +<td> <!--Params-->Y +<td> <!--Struct-->Y +<td> <!--Utility-->N +<td> <!--Free-->0 +<td> <!--Undir-->U,D +<td> <!--Inference-->Jtree +<td> <!--Comments--> +A C++ version of BNT; will be released 12/03. + + +<tr> +<td><a href=http://iridia.ulb.ac.be/pulcinella/Welcome.html > Pulcinella</a> +<td> IRIDIA +<td> Lisp +<td> Y +<td> WUM +<td> D +<td> Y +<td> N +<td> N +<td> N +<td> 0 +<td> D +<td> ? +<td> Uses valuation systems for non-probabilistic calculi. + +<tr> +<!-- http://civil.colorado.edu/~dodier/sonero-mirror/index.html --> +<td><a href=http://sourceforge.net/projects/riso>RISO</a> +<td> Dodier (U.Colorado) +<td> Java +<td> Y +<td> WUM +<td> G +<td> Y +<td> N +<td> N +<td> N +<td> 0 +<td> D +<td> Polytree +<td> Distributed implementation. + + + +<tr> +<td> <!--Name--> <a href=http://reasoning.cs.ucla.edu/samiam/> Sam Iam</a> +<td> <!--Authors-->Darwiche (UCLA) +<td> <!--Src-->N +<td> <!--API-->N ? +<td> <!--Exec-->WU ? (Java executable) +<td> <!--Cts-->G ? +<td> <!--GUI-->Y +<td> <!--Params-->Y +<td> <!--Struct-->N ? +<td> <!--Utility-->Y +<td> <!--Free-->0 +<td> <!--Undir-->D +<td> <!--Inference-->Recursive conditioning +<td> <!--Comments-->Also does sensitivity Analysis + + +<tr> +<td><a href=http://www.phil.cmu.edu/tetrad/>Tetrad</a> +<td> CMU +<td> N +<td> N +<td> WU +<td> G +<td> N +<td> Y +<td> CI +<td> N +<td> 0 +<td> U,D +<td> None +<td> - + + +<tr> +<td> <!--Name--> <a href="https://sourceforge.net/projects/unbbayes/">UnBBayes</a> +<td> <!--Authors-->? +<td> <!--Src-->Java +<td> <!--API-->- +<td> <!--Exec-->- +<td> <!--Cts-->D +<td> <!--GUI-->Y +<td> <!--Params-->N +<td> <!--Struct-->Y +<td> <!--Utility-->N +<td> <!--Free-->0 +<td> <!--Undir-->D +<td> <!--Inference-->jtree +<td> <!--Comments-->K2 for struct learning + + +<tr> +<td><a href=http://www.inference.phy.cam.ac.uk/jmw39/>Vibes</a> +<td> Winn & Bishop (U. Cambridge) +<td> Java +<td> Y +<td> WU +<td> Cx +<td> Y +<td> Y +<td> N +<td> N +<td> 0 +<td> D +<td> Variational +<td> +Not yet available. + + +<tr> +<td><a href=http://snowhite.cis.uoguelph.ca/faculty_info/yxiang/ww3/> Web Weaver</a> +<td> Xiang (U.Regina) +<td> Java +<td> Y +<td> WUM +<td> D +<td> Y +<td> N +<td> N +<td> Y +<td> 0 +<td> D +<td> ? +<td> - + +<tr> +<td><a href=http://research.microsoft.com/~dmax/WinMine/tooldoc.htm > WinMine</a> +<td> Microsoft +<td> N +<td> N +<td> W +<td> Cx +<td> Y +<td> Y +<td> Y +<td> N +<td> 0 +<td> U,D +<td> None +<td> Learns BN or dependency net structure. + +<tr> +<td><a href=http://www.staff.city.ac.uk/~rgc/webpages/xbpage.html > XBAIES 2.0</a> +<td> Cowell (City U.) +<td> N +<td> N +<td> W +<td> G +<td> Y +<td> Y +<td> N +<td> Y +<td> 0 +<td> CG +<td> Jtree +<td> - + +<tr> + +</table> + + +<p> +<h2>Other sites related to (software for) graphical models</h2> +<ul> + + +<li> +<a +href="http://directory.google.com/Top/Computers/Artificial_Intelligence/Belief_Networks/Software/"> +Google's list</a> of Bayes net software. + +<!-- +<li> <a href="http://www.sis.pitt.edu/~dsl/da-software.html"> +Decision analysis programs</a>, list maintained by +Marek Druzdzel. +--> + +<li> <a href="http://www.cs.cmu.edu/~lorens/papers/mscthesis.html"> +Comparison of decision analysis software packages</a> by +Håkan L. Younes. The emphasis is on real-time decision making. + +<li> <a href="http://bayes.stat.washington.edu/almond/belief.html"> +Older belief net programs</a> (c 1996), a list created (but no longer maintained) +by Russ Almond. + +<li> +<a +href="http://www.cs.huji.ac.il/labs/compbio/Repository"> +Repository of Bayes nets</a>. + +</document>