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diff toolboxes/FullBNT-1.0.7/bnt/examples/dynamic/HHMM/Motif/sample_motif_hhmm.m @ 0:e9a9cd732c1e tip

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first hg version after svn
author wolffd
date Tue, 10 Feb 2015 15:05:51 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/toolboxes/FullBNT-1.0.7/bnt/examples/dynamic/HHMM/Motif/sample_motif_hhmm.m	Tue Feb 10 15:05:51 2015 +0000
@@ -0,0 +1,10 @@
+%bnet = mk_motif_hhmm('motif_pattern', 'acca', 'background', 't');
+bnet = mk_motif_hhmm('motif_pattern', 'accaggggga', 'background', []);
+
+chars = ['a', 'c', 'g', 't'];
+Tmax = 100;
+
+for seqi=1:5
+  evidence = cell2num(sample_dbn(bnet, 'length', Tmax));
+  chars(evidence(end,:))
+end