comparison toolboxes/MIRtoolbox1.3.2/somtoolbox/som_divide.m @ 0:e9a9cd732c1e tip

first hg version after svn
author wolffd
date Tue, 10 Feb 2015 15:05:51 +0000
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-1:000000000000 0:e9a9cd732c1e
1 function [V,I]=som_divide(sMap, D, inds, mode)
2
3 %SOM_DIVIDE Divides a dataset according to a given map.
4 %
5 % [V,I]=som_divide(sMap, sData, [inds], [mode])
6 %
7 % ARGUMENTS ([]'s are optional)
8 %
9 % sMap (struct or matrix) map struct or codebook (size munits x dim)
10 % sData (struct or matrix) data struct or matrix (size N x dim )
11 % [inds] From which map units should the local data sets
12 % be constructed. Interpretation depends on mode
13 % argument. By default [1:munits].
14 % 'class': (vector) munits x 1 matrix of class numbers
15 % 'index': (vector) K x 1 vector of map node indexes
16 % 'index': (matrix) K x k matrix of map node subscripts
17 % [mode] (string) 'index' or 'class', if inds is a vector of length
18 % munits, default is 'class', otherwise 'index'.
19 % RETURNS
20 %
21 % If mode == 'index'
22 % V (matrix) data vectors hitting the specified nodes (size K x dim)
23 % I (vector) corresponding data row indexes (size K x 1)
24 %
25 % If mode == 'class' (this can be used after using som_select)
26 % V (cell array) V{K} includes vectors whose BMU has class number
27 % K in the input matrix 'coord'. Note that
28 % values of K below 1 are ignored.
29 % I (cell array) corresponding data indexes in the cell array
30 %
31 % NOTE: if the same node is specified multiple times, only one
32 % set of hits is returned.
33 %
34 % See also SOM_BMU, SOM_HITS, SOM_SELECT.
35
36 % Version 1.0beta 260997 Johan
37 % Version 2.0beta 230300 juuso
38
39 % Contributed to SOM Toolbox vs2, Mar 23rd, 2000 by Juha Vesanto
40 % http://www.cis.hut.fi/projects/somtoolbox/
41
42 %%%% Init & Check %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
43
44 error(nargchk(0, 4, nargin)) % check if no. of input args is correct
45
46 % map
47 if isstruct(sMap),
48 msize = sMap.topol.msize;
49 dim = size(sMap.codebook,2);
50 else
51 msize = [size(sMap,1) 1];
52 dim = size(sMap,2);
53 end
54 munits = prod(msize);
55
56 % data
57 if isstruct(D), D=D.data; end
58
59 % inds
60 if nargin<3, inds = 1:munits; end
61 isvec = prod(size(inds))==length(inds);
62
63 % mode
64 if nargin<4,
65 if isvec & length(inds)==munits,
66 mode = 'class';
67 else
68 mode = 'index';
69 end
70 end
71
72 %%% Action & Build output according to the mode string output
73
74 if ~isvec, inds = som_sub2ind(msize,inds); end
75
76 bmus=som_bmus(sMap,D);
77
78 switch mode
79 case 'index'
80 I=find(ismember(bmus,inds));
81 V=D(I,:);
82 case 'class'
83 K=max(inds); % classes
84 V = cell(K,1);
85 I = cell(K,1);
86 for i=1:K,
87 N_ind=find(inds == i); % indexes of the units of class i
88 I{i}=find(ismember(bmus,N_ind)); % data indexes
89 V{i}=D(I{i},:);
90 end
91 end
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