annotate toolboxes/FullBNT-1.0.7/bnt/potentials/@mpot/marginalize_pot.m @ 0:e9a9cd732c1e tip

first hg version after svn
author wolffd
date Tue, 10 Feb 2015 15:05:51 +0000
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wolffd@0 1 function smallpot = marginalize_pot(bigpot, keep, maximize, useC)
wolffd@0 2 % MARGINALIZE_POT Marginalize a mpot onto a smaller domain.
wolffd@0 3 % smallpot = marginalize_pot(bigpot, keep, maximize, useC)
wolffd@0 4 %
wolffd@0 5 % The maximize argument is ignored - maxing out a Gaussian is the same as summing it out,
wolffd@0 6 % since the mode and mean are equal.
wolffd@0 7 % The useC argument is ignored.
wolffd@0 8
wolffd@0 9
wolffd@0 10 node_sizes = sparse(1, max(bigpot.domain));
wolffd@0 11 node_sizes(bigpot.domain) = bigpot.sizes;
wolffd@0 12 sum_over = mysetdiff(bigpot.domain, keep);
wolffd@0 13
wolffd@0 14 [logp, mu, Sigma] = marginalize_gaussian(bigpot.logp, bigpot.mu, bigpot.Sigma, ...
wolffd@0 15 keep, sum_over, node_sizes);
wolffd@0 16 smallpot = mpot(keep, node_sizes(keep), logp, mu, Sigma);
wolffd@0 17
wolffd@0 18 %%%%%%
wolffd@0 19
wolffd@0 20 function [logpX, muX, SXX] = marginalize_gaussian(logp, mu, Sigma, X, Y, ns)
wolffd@0 21 % MARGINALIZE_GAUSSIAN Compute Pr(X) from Pr(X,Y) where X and Y are jointly Gaussian.
wolffd@0 22 % [logpX, muX, SXX] = marginalize_gaussian(logp, mu, Sigma, X, Y, ns)
wolffd@0 23 %
wolffd@0 24 % sizes(i) is the size of the i'th block in domain.
wolffd@0 25
wolffd@0 26 [muX, muY, SXX, SXY, SYX, SYY] = partition_matrix_vec(mu, Sigma, X, Y, ns);
wolffd@0 27 logpX = logp; % Lauritzen (1996) p161