annotate toolboxes/FullBNT-1.0.7/bnt/potentials/@cgpot/normalize_pot.m @ 0:e9a9cd732c1e tip

first hg version after svn
author wolffd
date Tue, 10 Feb 2015 15:05:51 +0000
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wolffd@0 1 function [pot, loglik] = normalize_pot(pot)
wolffd@0 2 % NORMALIZE_POT Convert the CG potential Pr(X,E) into Pr(X|E) and return log Pr(E).
wolffd@0 3 % [pot, loglik] = normalize_pot(pot)
wolffd@0 4
wolffd@0 5 % Marginalize down to [], so that the normalizing constant becomes Pr(E)
wolffd@0 6 temp = cg_can_to_mom(marginalize_pot(pot, []));
wolffd@0 7 %loglik = temp.mom{1}.logp;
wolffd@0 8 [temp2, loglik] = normalize_pot(temp.mom{1});
wolffd@0 9
wolffd@0 10 % Adjust scale factor to reflect the fact that the pot now represents Pr(X | E) instead of Pr(X,E).
wolffd@0 11
wolffd@0 12 scale = -loglik;
wolffd@0 13 if 1
wolffd@0 14 switch pot.subtype
wolffd@0 15 case 'm'
wolffd@0 16 for i=1:pot.dsize
wolffd@0 17 pot.mom{i} = rescale_pot(pot.mom{i}, scale);
wolffd@0 18 end
wolffd@0 19 case 'c'
wolffd@0 20 for i=1:pot.dsize
wolffd@0 21 pot.can{i} = rescale_pot(pot.can{i}, scale);
wolffd@0 22 end
wolffd@0 23 end
wolffd@0 24 end