annotate toolboxes/FullBNT-1.0.7/bnt/examples/dynamic/bat1.m @ 0:e9a9cd732c1e tip

first hg version after svn
author wolffd
date Tue, 10 Feb 2015 15:05:51 +0000
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wolffd@0 1 % Compare the speeds of various inference engines on the BAT DBN
wolffd@0 2 [bnet, names] = mk_bat_dbn;
wolffd@0 3
wolffd@0 4 T = 3; % fixed length sequence - we make it short just for speed
wolffd@0 5
wolffd@0 6 USEC = exist('@jtree_C_inf_engine/collect_evidence','file');
wolffd@0 7
wolffd@0 8 disp('constructing engines for BAT');
wolffd@0 9 engine = {}; % time in seconds for inference
wolffd@0 10 engine{end+1} = jtree_unrolled_dbn_inf_engine(bnet, T, 'useC', USEC); % 0.39
wolffd@0 11 engine{end+1} = smoother_engine(jtree_2TBN_inf_engine(bnet)); % 4.89
wolffd@0 12 engine{end+1} = jtree_dbn_inf_engine(bnet); % 4.45
wolffd@0 13 if 0
wolffd@0 14 engine{end+1} = jtree_ndx_dbn_inf_engine(bnet, 'ndx_type', 'SD'); % 2.98
wolffd@0 15 engine{end+1} = jtree_ndx_dbn_inf_engine(bnet, 'ndx_type', 'D'); % 3.52
wolffd@0 16 engine{end+1} = jtree_ndx_dbn_inf_engine(bnet, 'ndx_type', 'B'); % 2.40
wolffd@0 17 if USEC, engine{end+1} = jtree_C_dbn_inf_engine(bnet); end % 3.54
wolffd@0 18 %engine{end+1} = hmm_inf_engine(bnet, onodes); % too big
wolffd@0 19 end
wolffd@0 20
wolffd@0 21 %tic; engine{end+1} = frontier_inf_engine(bnet); toc % very slow
wolffd@0 22 % The frontier engine thrashes badly on the BAT network
wolffd@0 23 %tic; engine{end+1} = bk_inf_engine(bnet, 'exact', onodes); toc % SLOW!
wolffd@0 24
wolffd@0 25 %tic; engine{end+1} = bk_inf_engine(bnet, 'ff', onodes); toc
wolffd@0 26
wolffd@0 27 %clusters{1} = [stringmatch({'LeftClr', 'RightClr', 'LatAct', 'Xdot', 'InLane'}, names)];
wolffd@0 28 %clusters{2} = [stringmatch({'FwdAct', 'Ydot', 'Stopped', 'EngStatus', 'FBStatus'}, names)];
wolffd@0 29
wolffd@0 30 %tic; engine{end+1} = bk_inf_engine(bnet, clusters, onodes); toc
wolffd@0 31
wolffd@0 32 disp('inference')
wolffd@0 33 time = cmp_inference_dbn(bnet, engine, T)
wolffd@0 34
wolffd@0 35 disp('learning')
wolffd@0 36 time = cmp_learning_dbn(bnet, engine, T)
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