annotate toolboxes/FullBNT-1.0.7/KPMtools/entropy.m @ 0:e9a9cd732c1e tip

first hg version after svn
author wolffd
date Tue, 10 Feb 2015 15:05:51 +0000
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wolffd@0 1 function H = entropy(v, scale)
wolffd@0 2 % ENTROPY Entropy log base 2
wolffd@0 3 % H = entropy(v)
wolffd@0 4 % If v is a matrix, we compute the entropy of each column
wolffd@0 5 %
wolffd@0 6 % % H = entropy(v,1) means we scale the result so that it lies in [0,1]
wolffd@0 7
wolffd@0 8 if nargin < 2, scale = 0; end
wolffd@0 9
wolffd@0 10 v = v + (v==0);
wolffd@0 11 H = -1 * sum(v .* log2(v), 1); % sum the rows
wolffd@0 12
wolffd@0 13 if scale
wolffd@0 14 n = size(v, 1);
wolffd@0 15 unif = normalise(ones(n,1));
wolffd@0 16 H = H / entropy(unif);
wolffd@0 17 end