mas01mj@726: package org.omras2;
mas01mj@726: import lombok.Getter;
mas01mj@726: import lombok.Setter;
mas01mj@726: 
mas01mj@726: public class Query
mas01mj@726: {
mas01mj@726: 	public enum Accumulation { DB, PER_TRACK, ONE_TO_ONE };
mas01mj@726: 	public enum Distance { DOT, EUCLIDEAN_NORMED, EUCLIDEAN };
mas01mj@726: 
mas01mj@726: 	@Getter @Setter private int seqLength;
mas01mj@726: 	@Getter @Setter private int seqStart;
mas01mj@726: 	@Getter @Setter private int npoints;
mas01mj@726: 	@Getter @Setter private int ntracks;
mas01mj@726: 	@Getter @Setter private int hopSize;
mas01mj@726: 	
mas01mj@726: 	@Getter @Setter private boolean exhaustive;
mas01mj@726: 	@Getter @Setter private boolean hasFalsePositives;
mas01mj@726: 	@Getter @Setter private Accumulation accumulation;
mas01mj@726: 	@Getter @Setter private Distance distance;
mas01mj@726: 
mas01mj@726: 	@Getter @Setter private String[] includeKeys = {};
mas01mj@726: 	@Getter @Setter private String[] excludeKeys = {};
mas01mj@726: 
mas01mj@726: 	@Getter @Setter private double radius;
mas01mj@726: 	@Getter @Setter private double absThres;
mas01mj@726: 	@Getter @Setter private double relThres;
mas01mj@726: 	@Getter @Setter private double durRatio;
mas01mj@729: 
mas01mj@729: 	@Getter @Setter private Datum datum;
mas01mj@729: 
mas01mj@726: 	public Query()
mas01mj@726: 	{
mas01mj@726: 		accumulation = Accumulation.PER_TRACK;
mas01mj@726: 		distance = Distance.EUCLIDEAN_NORMED;
mas01mj@729: 		datum = new Datum();
mas01mj@726: 	}
mas01mj@726: 
mas01mj@726: }