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log index.cpp @ 323:64c844de82d0 large_adb

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Thu, 21 Aug 2008 21:02:14 +0000 mas01mc Fixed an indexing bug where rest of track was ignored after first shingle with power below threshold. Put default O2_LSH_POINT_BITS back to 14 (16384 points), can be altered at compile time with CFLAGS+=-DO2_LSH_POINT_BITS n large_adb
Thu, 21 Aug 2008 19:16:21 +0000 mas01mc Added --adb_feature_root=path filename prefix for locating LARGE_ADB features with relative paths at QUERY time. Also added convenience argument --adb_root=path prefix for -d database command option. large_adb
Wed, 20 Aug 2008 13:50:58 +0000 mas01mc working LARGE_ADB support. Activiate at creation time with -N --ntracks 20001 or greater, or with --datasize 1356 or greater, or both. LARGE_ADB blocks non-indexed QUERY. large_adb
Tue, 19 Aug 2008 20:27:15 +0000 mas01mc Added indexing support for O2_FLAG_LARGE_ADB. Tested on indexed query by features. No indexed query-by-key yet. No --lsh_exact yet. large_adb
Sat, 09 Aug 2008 15:04:16 +0000 mas01mc Added sequencehop on Indexing to optionally reduce size of large indexes. Added cleanup() call on WS query exit to fix MMAP memory leak
Thu, 07 Aug 2008 01:53:38 +0000 mas01mc Added server-side loading of persistent index (LSH hashtables) via --load_index -d dbName -R radius -l sequenceLength. Queries using these parameters will lookup the memory-resident hashtable instead of loading one from disk.
Tue, 05 Aug 2008 15:34:10 +0000 mas01cr Guard against too-short tracks. Fixes a segfault on attempting to index
Fri, 01 Aug 2008 15:04:31 +0000 mas01mc fixed file size allocation for FORMAT2 files. Made LSH index size() in bytes an unsigned long long. Changed the name of lsh_inCore flag to lsh_on_disk (to reverse the sense of the 'flag').
Tue, 29 Jul 2008 22:01:17 +0000 mas01mc Completed merge of lshlib back to current version of the trunk.
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