view xthresh.c @ 663:bcc7a6ddb2c8

Better treatment of refine.hopsize

Only adapt the query loop hopping if ADB_REFINE_HOP_SIZE is actually on the
refine flags, rather than blithely taking the value of refine.hopsize.
Significantly reduces the chances of inadvertently causing an infinite loop.

Adjust the tests to remove the 23 now useless instances of
  "refine.hopsize = 1;"

Closes trac ticket #16

#include <gsl/gsl_sf.h>
#include <stdio.h>
#include <stdlib.h>
#include <math.h>

int main(int argc, char *argv[]) {
  if(argc != 4) {
    fprintf(stderr, "Wrong number of arguments: %d\n", argc);
    exit(1);
  }

  long int meanN = strtol(argv[1], NULL, 10);

  double d = strtod(argv[2], NULL);
  double sigma2 = strtod(argv[3], NULL);

  double logw = (2 / d) * gsl_sf_log(-gsl_sf_log(0.99));
  double logxthresh = gsl_sf_log(sigma2) + logw
    - (2 / d) * gsl_sf_log(meanN)
    - gsl_sf_log(d/2)
    - (2 / d) * gsl_sf_log(2 / d)
    + (2 / d) * gsl_sf_lngamma(d / 2);

  printf("w: %f\n", exp(logw));
  printf("x_thresh: %f\n", exp(logxthresh));
  exit(0);
}