view pointpair.h @ 663:bcc7a6ddb2c8

Better treatment of refine.hopsize

Only adapt the query loop hopping if ADB_REFINE_HOP_SIZE is actually on the
refine flags, rather than blithely taking the value of refine.hopsize.
Significantly reduces the chances of inadvertently causing an infinite loop.

Adjust the tests to remove the 23 now useless instances of
  "refine.hopsize = 1;"

Closes trac ticket #16

// should probably be rewritten
class PointPair {
 public:
  uint32_t trackID;
  uint32_t qpos;
  uint32_t spos;
  PointPair(uint32_t a, uint32_t b, uint32_t c);
};

bool operator<(const PointPair& a, const PointPair& b);