diff gengetopt.in @ 147:a564e6d7a30c powertable

Add absolute and relative threshold arguments, and initialize variables based on them. Also initialize the power file for queries.
author mas01cr
date Wed, 31 Oct 2007 12:01:28 +0000
parents c9c508be69b3
children
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--- a/gengetopt.in	Wed Oct 31 10:20:09 2007 +0000
+++ b/gengetopt.in	Wed Oct 31 12:01:28 2007 +0000
@@ -43,6 +43,8 @@
 option "resultlength" r "maximum length of the result list." int typestr="length" default="10" optional
 option "sequencelength" l "length of sequences for sequence search." int typestr="length" default="16" dependon="QUERY" optional
 option "sequencehop"  h "hop size of sequence window for sequence search." int typestr="hop" default="1" dependon="QUERY" optional
+option "absolute-threshold" - "absolute power threshold for consideration of query or target sequence (in Bels)" double dependon="QUERY" optional
+option "relative-threshold" - "relative power threshold between query and target sequence (in Bels)" double dependon="QUERY" optional
 
 section "Web Services" sectiondesc="These commands enable the database process to establish a connection via the internet and operate as separate client and server processes.\n"
 option "SERVER" s "run as standalone web service on named port." int typestr="port" default="14475" optional