annotate emd.h @ 258:d12364d8b9ea adding-emd

added cmdline stubs for distance switch and skeleton methods for EMD

#ifndef _EMD_H
#define _EMD_H
/*
    emd.h

    Last update: 3/24/98

    An implementation of the Earth Movers Distance.
    Based of the solution for the Transportation problem as described in
    "Introduction to Mathematical Programming" by F. S. Hillier and 
    G. J. Lieberman, McGraw-Hill, 1990.

    Copyright (C) 1998 Yossi Rubner
    Computer Science Department, Stanford University
    E-Mail: [e-mail]   URL: http://vision.stanford.edu/~rubner
*/


/* DEFINITIONS */
#define MAX_SIG_SIZE   100
#define MAX_ITERATIONS 500
#define INFINITY       1e22
#define EPSILON        1e-6

/*****************************************************************************/
/* feature_t SHOULD BE MODIFIED BY THE USER TO REFLECT THE FEATURE TYPE      */
/*Attempting to get this to work for gmms
 * here is how this is going to work:
 * each component has 2 arrays of doubles, the vector describing the mean and vector describing covar
 * also the struct has an int defining how many dimensions are in each component*/
 //also I need to sort out dimension generalized euclidean distance, though this shouldn't be too hard...
typedef struct { 
	int numdims;
	double *means, *covar;//these should both contain a vector of numdims doubles  
	} feature_t;
/*****************************************************************************/


typedef struct
{
  int n;                /* Number of features in the signature */
  feature_t *Features;  /* Pointer to the features vector */
  float *Weights;       /* Pointer to the weights of the features */
} signature_t;


typedef struct
{
  int from;             /* Feature number in signature 1 */
  int to;               /* Feature number in signature 2 */
  float amount;         /* Amount of flow from "from" to "to" */
} flow_t;



float emd(signature_t *Signature1, signature_t *Signature2,
	  float (*func)(feature_t *, feature_t *),
	  flow_t *Flow, int *FlowSize);

#endif