annotate man/man1/genasa.1 @ 0:5242703e91d3 tip

Initial checkin for AIM92 aimR8.2 (last updated May 1997).
author tomwalters
date Fri, 20 May 2011 15:19:45 +0100
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tomwalters@0 1 .TH GENASA 1 "11 May 1995"
tomwalters@0 2 .LP
tomwalters@0 3 .SH NAME
tomwalters@0 4 .LP
tomwalters@0 5 genasa \- generate auditory spectral analysis
tomwalters@0 6 .LP
tomwalters@0 7 .SH SYNOPSIS
tomwalters@0 8 .LP
tomwalters@0 9 genasa [ option=value | -option ] [ filename ]
tomwalters@0 10 .LP
tomwalters@0 11 .LP
tomwalters@0 12 .SH DESCRIPTION
tomwalters@0 13 .LP
tomwalters@0 14 The genasa module of the AIM software performs a time-domain spectral
tomwalters@0 15 analysis on the input wave using a bank of auditory filters, and
tomwalters@0 16 summarises the information in a sequence of auditory spectra. The
tomwalters@0 17 spectral analysis converts the input wave into an array of filtered
tomwalters@0 18 waves, one for each channel of a gammatone auditory filterbank. The
tomwalters@0 19 surface of the array of filtered waves is AIM's representation of
tomwalters@0 20 basilar membrane motion (BMM) as a function of time. The sequence of
tomwalters@0 21 auditory spectra is produced by calculating the envelope of the BMM
tomwalters@0 22 and extracting spectral slices from the envelope every 'frstep_epn'
tomwalters@0 23 ms. The envelope is calculated continuously, by rectifing,
tomwalters@0 24 compressing, and lowpass filtering the individual BMM waves as they
tomwalters@0 25 flow from the filterbank.
tomwalters@0 26 .LP
tomwalters@0 27 The auditory spectrum produced by genasa is intended to simulate the
tomwalters@0 28 spectral representation of a sound as it occurs in the peripheral
tomwalters@0 29 auditory system just prior to neural transduction. As a result, the
tomwalters@0 30 frequency resolution of the analysis varies with the center frequency
tomwalters@0 31 of the channel, and the distribution of channels across frequency is
tomwalters@0 32 chosen to match that in the auditory system. The auditory spectrum is
tomwalters@0 33 a plot of the activity in each channel as a function of the centre
tomwalters@0 34 frequency of the auditory filter (in ERB's). The representation is
tomwalters@0 35 referred to as an auditory spectrum to distinguish it from the Fourier
tomwalters@0 36 energy spectrum (Patterson, 1994a). The suffix 'asa' is short for
tomwalters@0 37 'auditory spectral analysis'; it is used to distinguish this spectral
tomwalters@0 38 representation from three other spectral representations provided by
tomwalters@0 39 the AIM software ('epn' excitation pattern, 'sgm' auditory
tomwalters@0 40 spectrogram, and 'cgm' cochleogram).
tomwalters@0 41 .LP
tomwalters@0 42 The spectral analysis performed by genasa is the same as that
tomwalters@0 43 performed by genbmm. The primary differences are in the display
tomwalters@0 44 defaults and the inclusion of the Compression and Leaky Integration
tomwalters@0 45 modules used to construct the spectral slices from the BMM. As a
tomwalters@0 46 result, this manual entry is restricted to describing the option
tomwalters@0 47 values that differ from those in genbmm and the additional options
tomwalters@0 48 required to control the Compression and Leaky Integration.
tomwalters@0 49 .LP
tomwalters@0 50 .SH DISPLAY DEFAULTS
tomwalters@0 51 .LP
tomwalters@0 52 The default values for three of the display options are reset to
tomwalters@0 53 produce a spectral format rather than a landscape; specifically,
tomwalters@0 54 display=excitation, bottom=0 and top=2500. The number of channels is
tomwalters@0 55 increased to 128 to ensure reasonable frequency resolution in the
tomwalters@0 56 spectral display.
tomwalters@0 57 .LP
tomwalters@0 58 .SH COMPRESSION AND LEAKY INTEGRATION
tomwalters@0 59 .LP
tomwalters@0 60 Compression and lowpass filtering are activated and the neural
tomwalters@0 61 encoding stage that comes between them is turned off:
tomwalters@0 62 .LP
tomwalters@0 63 .LP
tomwalters@0 64 .SS "Compression"
tomwalters@0 65 .PP
tomwalters@0 66 Auditory spectra are usually produced via the functional route in
tomwalters@0 67 AIM. In this case, compress is set on
tomwalters@0 68 .LP
tomwalters@0 69 .TP 13
tomwalters@0 70 compress
tomwalters@0 71 Logarithmic compressor switch
tomwalters@0 72 .RS
tomwalters@0 73 Switch. Default: on.
tomwalters@0 74 .RE
tomwalters@0 75 .RS
tomwalters@0 76 .LP
tomwalters@0 77 Note: The compressor in the functional route of AIM is logarithmic and
tomwalters@0 78 it screens out negative BMM values before compression. This rectifies
tomwalters@0 79 the wave during the compression process and so the separate rectify
tomwalters@0 80 option is left off.
tomwalters@0 81 .RE
tomwalters@0 82 .LP
tomwalters@0 83 .RS
tomwalters@0 84 .LP
tomwalters@0 85 Note: The compressor in the physiological route of AIM is an integral
tomwalters@0 86 part of the tlf module, so when using this route to produce auditory
tomwalters@0 87 spectra, turn off the logarithmic compressor (i.e. compress=off). The
tomwalters@0 88 compressor in tlf does not screen out negative values so it is also
tomwalters@0 89 important to set rectify=on.
tomwalters@0 90 .RE
tomwalters@0 91 .RS
tomwalters@0 92 .LP
tomwalters@0 93 Full wave rectification is produced if rectify is set to 2. This is
tomwalters@0 94 useful when calculating envelopes with genasa.
tomwalters@0 95 .RE
tomwalters@0 96 .LP
tomwalters@0 97 .LP
tomwalters@0 98 .SS "Transduction"
tomwalters@0 99 .PP
tomwalters@0 100 .LP
tomwalters@0 101 .TP 13
tomwalters@0 102 transduction
tomwalters@0 103 Neural transduction switch (at, meddis, off)
tomwalters@0 104 .RS
tomwalters@0 105 Switch. Default: off.
tomwalters@0 106 .RE
tomwalters@0 107 .LP
tomwalters@0 108 .LP
tomwalters@0 109 .SS "Leaky Integration"
tomwalters@0 110 .PP
tomwalters@0 111 .LP
tomwalters@0 112 .TP 13
tomwalters@0 113 stages_idt
tomwalters@0 114 Number of stages of lowpass filtering
tomwalters@0 115 .RS
tomwalters@0 116 Default unit: scalar. Default value: 2
tomwalters@0 117 .RE
tomwalters@0 118 .TP 13
tomwalters@0 119 tup_idt
tomwalters@0 120 The time constant for each filter stage
tomwalters@0 121 .RS
tomwalters@0 122 Default unit: ms. Default value: 8 ms.
tomwalters@0 123 .RE
tomwalters@0 124 .LP
tomwalters@0 125 The Equivalent Rectandular Duration (ERD) of a two stage lowpass
tomwalters@0 126 filter is about 1.6 times the time constant of each stage, or
tomwalters@0 127 12.8 ms in the current case.
tomwalters@0 128 .TP 13
tomwalters@0 129 frstep_epn
tomwalters@0 130 The time between successive spectral frames
tomwalters@0 131 .RS
tomwalters@0 132 Default unit: ms. Default value: 10 ms.
tomwalters@0 133 .RE
tomwalters@0 134 .LP
tomwalters@0 135 With a frstep_epn of 10 ms, genasa will produce
tomwalters@0 136 spectral frames at a rate of 100 per second.
tomwalters@0 137 .LP
tomwalters@0 138 .TP 13
tomwalters@0 139 downsample
tomwalters@0 140 The time between successive spectral frames.
tomwalters@0 141 .RS
tomwalters@0 142 Default unit: ms. Default value: 10 ms.
tomwalters@0 143 .RE
tomwalters@0 144 .LP
tomwalters@0 145 Downsample is simply another name for frstep_epn, provided to
tomwalters@0 146 facilitate a different mode of thinking about time-series data.
tomwalters@0 147 .RE
tomwalters@0 148 .LP
tomwalters@0 149 .SH FILES
tomwalters@0 150 .LP
tomwalters@0 151 .TP 13
tomwalters@0 152 .genasarc
tomwalters@0 153 The options file for genasa.
tomwalters@0 154 .LP
tomwalters@0 155 .SH SEE ALSO
tomwalters@0 156 .LP
tomwalters@0 157 genbmm, gensgm
tomwalters@0 158 .LP
tomwalters@0 159 .SH BUGS
tomwalters@0 160 .LP
tomwalters@0 161 None currently known.
tomwalters@0 162 .SH COPYRIGHT
tomwalters@0 163 .LP
tomwalters@0 164 Copyright (c) Applied Psychology Unit, Medical Research Council, 1995
tomwalters@0 165 .LP
tomwalters@0 166 Permission to use, copy, modify, and distribute this software without fee
tomwalters@0 167 is hereby granted for research purposes, provided that this copyright
tomwalters@0 168 notice appears in all copies and in all supporting documentation, and that
tomwalters@0 169 the software is not redistributed for any fee (except for a nominal
tomwalters@0 170 shipping charge). Anyone wanting to incorporate all or part of this
tomwalters@0 171 software in a commercial product must obtain a license from the Medical
tomwalters@0 172 Research Council.
tomwalters@0 173 .LP
tomwalters@0 174 The MRC makes no representations about the suitability of this
tomwalters@0 175 software for any purpose. It is provided "as is" without express or
tomwalters@0 176 implied warranty.
tomwalters@0 177 .LP
tomwalters@0 178 THE MRC DISCLAIMS ALL WARRANTIES WITH REGARD TO THIS SOFTWARE, INCLUDING
tomwalters@0 179 ALL IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS, IN NO EVENT SHALL
tomwalters@0 180 THE A.P.U. BE LIABLE FOR ANY SPECIAL, INDIRECT OR CONSEQUENTIAL DAMAGES
tomwalters@0 181 OR ANY DAMAGES WHATSOEVER RESULTING FROM LOSS OF USE, DATA OR PROFITS,
tomwalters@0 182 WHETHER IN AN ACTION OF CONTRACT, NEGLIGENCE OR OTHER TORTIOUS ACTION,
tomwalters@0 183 ARISING OUT OF OR IN CONNECTION WITH THE USE OR PERFORMANCE OF THIS
tomwalters@0 184 SOFTWARE.
tomwalters@0 185 .LP
tomwalters@0 186 .SH ACKNOWLEDGEMENTS
tomwalters@0 187 .LP
tomwalters@0 188 The AIM software was developed for Unix workstations by John
tomwalters@0 189 Holdsworth and Mike Allerhand of the MRC APU, under the direction of
tomwalters@0 190 Roy Patterson. The physiological version of AIM was developed by
tomwalters@0 191 Christian Giguere. The options handler is by Paul Manson. The revised
tomwalters@0 192 SAI module is by Jay Datta. Michael Akeroyd extended the postscript
tomwalters@0 193 facilites and developed the xreview routine for auditory image
tomwalters@0 194 cartoons.
tomwalters@0 195 .LP
tomwalters@0 196 The project was supported by the MRC and grants from the U.K. Defense
tomwalters@0 197 Research Agency, Farnborough (Research Contract 2239); the EEC Esprit
tomwalters@0 198 BR Porgramme, Project ACTS (3207); and the U.K. Hearing Research Trust.